Guide to the Human Genome
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Name: NDUFB11 Sequence: fasta or formatted (153aa) NCBI GI: 209862760
Description:

NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa isoform 2

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt prot [163aa] NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa is...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         15           4
 C cysteine            0.7          1           1
 D aspartate           5.9          9           1
 E glutamate           9.2         14           1
 F phenylalanine       4.6          7           3
 G glycine             5.2          8           1
 H histidine           0.7          1           1
 I isoleucine          2.6          4           2
 K lysine              3.9          6           1
 L leucine             9.2         14           2
 M methionine          2.6          4           1
 N asparagine          3.3          5           1
 P proline             9.2         14           2
 Q glutamine           1.3          2           1
 R arginine            8.5         13           2
 S serine              7.2         11           2
 T threonine           3.3          5           2
 V valine              7.2         11           2
 W tryptophan          2.6          4           1
 Y tyrosine            3.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ... 
NDUFB11               0.972   NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1...
SLC19A2               0.024   solute carrier family 19, member 2 
CACNA2D2              0.024   calcium channel, voltage-dependent, alpha 2/delta su...
CACNA2D2              0.024   calcium channel, voltage-dependent, alpha 2/delta su...
CACNA2D1              0.024   calcium channel, voltage-dependent, alpha 2/delta su...
SLC22A5               0.017   solute carrier family 22 member 5 
AGPAT9                0.017   1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo...
MIDN                  0.017   midnolin 
AGPAT6                0.017   lysophosphatidic acid acyltransferase zeta precursor...
NBEAL2                0.017   neurobeachin-like 2 
TLE2                  0.017   transducin-like enhancer protein 2 isoform 2 
TLE2                  0.017   transducin-like enhancer protein 2 isoform 1 
DNAH7                 0.014   dynein, axonemal, heavy chain 7 
KIAA1211              0.010   hypothetical protein LOC57482 
PHF17                 0.010   PHD finger protein 17 long isoform 
SPDYE4                0.010   speedy homolog E4 
DBN1                  0.010   drebrin 1 isoform b 
DBN1                  0.010   drebrin 1 isoform a 
CLCN6                 0.010   chloride channel 6 isoform ClC-6a 
CLCN6                 0.010   chloride channel 6 isoform ClC-6d 
CLCN6                 0.010   chloride channel 6 isoform ClC-6b 
CLCN6                 0.010   chloride channel 6 isoform ClC-6c 
DACT3                 0.010   thymus expressed gene 3-like 
TCFL5                 0.010   transcription factor-like 5 protein 
MAP7D1                0.010   MAP7 domain containing 1 
RCN1                  0.010   reticulocalbin 1 precursor 
DSCAML1               0.007   Down syndrome cell adhesion molecule like 1 
CC2D1B                0.007   coiled-coil and C2 domain containing 1B 
SRRM2                 0.007   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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