Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR5D13 Sequence: fasta or formatted (314aa) NCBI GI: 50233862
Description:

olfactory receptor, family 5, subfamily D, member 13

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         15           2
 C cysteine            4.1         13           1
 D aspartate           1.9          6           1
 E glutamate           2.9          9           1
 F phenylalanine       8.6         27           2
 G glycine             2.9          9           1
 H histidine           1.9          6           1
 I isoleucine         10.5         33           4
 K lysine              3.2         10           1
 L leucine            12.1         38           2
 M methionine          4.1         13           2
 N asparagine          3.8         12           2
 P proline             3.2         10           1
 Q glutamine           1.9          6           1
 R arginine            2.5          8           1
 S serine              9.9         31           2
 T threonine           8.9         28           2
 V valine              8.0         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily D, member 13... 
OR5D18                0.634   olfactory receptor, family 5, subfamily D, member 18...
OR5D16                0.614   olfactory receptor, family 5, subfamily D, member 16...
OR5D14                0.609   olfactory receptor, family 5, subfamily D, member 14...
OR5L2                 0.500   olfactory receptor, family 5, subfamily L, member 2 ...
OR5L1                 0.488   olfactory receptor, family 5, subfamily L, member 1 ...
OR5B12                0.468   olfactory receptor, family 5, subfamily B, member 12...
OR8D4                 0.448   olfactory receptor, family 8, subfamily D, member 4 ...
OR5I1                 0.446   olfactory receptor, family 5, subfamily I, member 1 [...
OR8I2                 0.443   olfactory receptor, family 8, subfamily I, member 2 ...
OR8G1                 0.443   olfactory receptor, family 8, subfamily G, member 1 ...
OR5AR1                0.436   olfactory receptor, family 5, subfamily AR, member 1...
OR8D1                 0.435   olfactory receptor, family 8, subfamily D, member 1 ...
OR8H1                 0.433   olfactory receptor, family 8, subfamily H, member 1 ...
OR8U1                 0.431   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.430   olfactory receptor, family 8, subfamily U, member 9 ...
OR5B3                 0.430   olfactory receptor, family 5, subfamily B, member 3 ...
OR8H3                 0.426   olfactory receptor, family 8, subfamily H, member 3 ...
OR8K5                 0.426   olfactory receptor, family 8, subfamily K, member 5...
OR8D2                 0.426   olfactory receptor, family 8, subfamily D, member 2 ...
OR5B21                0.426   olfactory receptor, family 5, subfamily B, member 21...
OR8J1                 0.425   olfactory receptor, family 8, subfamily J, member 1 ...
OR8U8                 0.425   olfactory receptor, family 8, subfamily U, member 8 ...
OR8J3                 0.423   olfactory receptor, family 8, subfamily J, member 3 ...
OR8K1                 0.423   olfactory receptor, family 8, subfamily K, member 1 ...
OR5R1                 0.423   olfactory receptor, family 5, subfamily R, member 1 ...
OR5F1                 0.421   olfactory receptor, family 5, subfamily F, member 1 ...
OR5B2                 0.421   olfactory receptor, family 5, subfamily B, member 2 ...
OR8H2                 0.421   olfactory receptor, family 8, subfamily H, member 2 ...
OR5A2                 0.421   olfactory receptor, family 5, subfamily A, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press