Search of human proteins with 53692184

Search of human proteins with 53692184

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|53692184 F-box only protein 9 isoform 3 [Homo sapiens]
         (403 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912546 F-box only protein 9 isoform 1 [Homo sapiens]              823   0.0  
gi|53692184 F-box only protein 9 isoform 3 [Homo sapiens]             823   0.0  
gi|15812201 F-box only protein 9 isoform 2 [Homo sapiens]             823   0.0  
gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]              49   6e-06
gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]              49   6e-06
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H...    36   0.071
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H...    36   0.071
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H...    36   0.071
gi|67003566 F-box protein 48 [Homo sapiens]                            33   0.35 
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     33   0.60 
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H...    33   0.60 
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H...    33   0.60 
gi|110735439 Werner syndrome protein [Homo sapiens]                    32   1.0  
gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent...    32   1.0  
gi|118766328 transmembrane and tetratricopeptide repeat containi...    32   1.3  
gi|118766330 transmembrane and tetratricopeptide repeat containi...    32   1.3  
gi|239741055 PREDICTED: similar to PRAME family member 10 [Homo ...    31   1.7  
gi|239741051 PREDICTED: similar to PRAME family member 10 [Homo ...    31   1.7  
gi|157743247 F-box protein 45 [Homo sapiens]                           31   1.7  
gi|130980075 centromere protein J [Homo sapiens]                       30   3.0  
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]             30   3.0  
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]             30   3.0  
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]             30   3.0  
gi|7656959 calpain 7 [Homo sapiens]                                    30   3.9  
gi|122937219 F-box protein 41 [Homo sapiens]                           30   5.1  
gi|192807292 keratin 24 [Homo sapiens]                                 29   6.6  
gi|4759082 serum deprivation response protein [Homo sapiens]           29   6.6  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     29   6.6  
gi|40254924 leucine rich repeat containing 59 [Homo sapiens]           29   8.6  

>gi|6912546 F-box only protein 9 isoform 1 [Homo sapiens]
          Length = 447

 Score =  823 bits (2127), Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%)

Query: 1   MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE 60
           MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE
Sbjct: 45  MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE 104

Query: 61  EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ 120
           EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ
Sbjct: 105 EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ 164

Query: 121 QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY 180
           QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY
Sbjct: 165 QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY 224

Query: 181 ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL 240
           ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL
Sbjct: 225 ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL 284

Query: 241 DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 300
           DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD
Sbjct: 285 DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 344

Query: 301 TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH 360
           TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH
Sbjct: 345 TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH 404

Query: 361 HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 403
           HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL
Sbjct: 405 HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 447


>gi|53692184 F-box only protein 9 isoform 3 [Homo sapiens]
          Length = 403

 Score =  823 bits (2127), Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%)

Query: 1   MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE 60
           MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE
Sbjct: 1   MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE 60

Query: 61  EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ 120
           EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ
Sbjct: 61  EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ 120

Query: 121 QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY 180
           QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY
Sbjct: 121 QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY 180

Query: 181 ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL 240
           ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL
Sbjct: 181 ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL 240

Query: 241 DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 300
           DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD
Sbjct: 241 DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 300

Query: 301 TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH 360
           TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH
Sbjct: 301 TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH 360

Query: 361 HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 403
           HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL
Sbjct: 361 HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 403


>gi|15812201 F-box only protein 9 isoform 2 [Homo sapiens]
          Length = 437

 Score =  823 bits (2127), Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%)

Query: 1   MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE 60
           MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE
Sbjct: 35  MFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEE 94

Query: 61  EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ 120
           EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ
Sbjct: 95  EQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ 154

Query: 121 QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY 180
           QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY
Sbjct: 155 QQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFY 214

Query: 181 ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL 240
           ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL
Sbjct: 215 ICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSL 274

Query: 241 DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 300
           DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD
Sbjct: 275 DGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 334

Query: 301 TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH 360
           TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH
Sbjct: 335 TDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIH 394

Query: 361 HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 403
           HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL
Sbjct: 395 HSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 437


>gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
          Length = 443

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 95  GDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMY 154
           G+ V N Y +         D L Y    L F    L L  P++      + VLP+E+ + 
Sbjct: 212 GENVANIYKDLQKLSRLFKDQLVY--PLLAFTRQALNL--PDV----FGLVVLPLELKLR 263

Query: 155 IFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMF 214
           IFR      LD+RS+  LS VCR  +  + DP +WR   L+ +  + ++ V  T W+E++
Sbjct: 264 IFRL-----LDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVR-VQDTDWKELY 317

Query: 215 LER 217
            +R
Sbjct: 318 RKR 320


>gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]
          Length = 522

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 95  GDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMY 154
           G+ V N Y +         D L Y    L F    L L  P++      + VLP+E+ + 
Sbjct: 291 GENVANIYKDLQKLSRLFKDQLVY--PLLAFTRQALNL--PDV----FGLVVLPLELKLR 342

Query: 155 IFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMF 214
           IFR      LD+RS+  LS VCR  +  + DP +WR   L+ +  + ++ V  T W+E++
Sbjct: 343 IFRL-----LDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVR-VQDTDWKELY 396

Query: 215 LER 217
            +R
Sbjct: 397 RKR 399


>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
           sapiens]
          Length = 589

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 31/174 (17%)

Query: 73  YRRAMQLVPDIEFKITY--TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ-----QQLTF 125
           Y     LVP      T+   R+ +G G     I      + + + L  FQ     ++L  
Sbjct: 75  YTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMFQSWSGPEKLLA 134

Query: 126 QESVLKLCQP----------ELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLV 175
            + ++  C+P          E +  +  IS+LP E+ +Y+      S L+ + L Q +  
Sbjct: 135 LDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVL-----SFLEPKDLLQAAQT 189

Query: 176 CRGFYICARDPEIWRLAC--------LKVWGRSCIKL-VPYTSWREMFLERPRV 220
           CR + I A D  +WR  C        L +  R  IK    ++ W+  ++ + R+
Sbjct: 190 CRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 243


>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
           sapiens]
          Length = 707

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 31/174 (17%)

Query: 73  YRRAMQLVPDIEFKITY--TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ-----QQLTF 125
           Y     LVP      T+   R+ +G G     I      + + + L  FQ     ++L  
Sbjct: 193 YTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMFQSWSGPEKLLA 252

Query: 126 QESVLKLCQP----------ELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLV 175
            + ++  C+P          E +  +  IS+LP E+ +Y+      S L+ + L Q +  
Sbjct: 253 LDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVL-----SFLEPKDLLQAAQT 307

Query: 176 CRGFYICARDPEIWRLAC--------LKVWGRSCIKL-VPYTSWREMFLERPRV 220
           CR + I A D  +WR  C        L +  R  IK    ++ W+  ++ + R+
Sbjct: 308 CRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 361


>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
           sapiens]
          Length = 627

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 31/174 (17%)

Query: 73  YRRAMQLVPDIEFKITY--TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQ-----QQLTF 125
           Y     LVP      T+   R+ +G G     I      + + + L  FQ     ++L  
Sbjct: 113 YTSTTGLVPCSATPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMFQSWSGPEKLLA 172

Query: 126 QESVLKLCQP----------ELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLV 175
            + ++  C+P          E +  +  IS+LP E+ +Y+      S L+ + L Q +  
Sbjct: 173 LDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVL-----SFLEPKDLLQAAQT 227

Query: 176 CRGFYICARDPEIWRLAC--------LKVWGRSCIKL-VPYTSWREMFLERPRV 220
           CR + I A D  +WR  C        L +  R  IK    ++ W+  ++ + R+
Sbjct: 228 CRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 281


>gi|67003566 F-box protein 48 [Homo sapiens]
          Length = 155

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 138 ESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPE-IWRLACLKV 196
           ES      +LP E+   IF     S LD+RSL + SL CR +    R+ + +W+  C+ V
Sbjct: 29  ESQNNFFELLPAEITFKIF-----SQLDIRSLCRASLTCRSWNDTIRNSDSLWKPHCMTV 83


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 18/51 (35%), Positives = 29/51 (56%)

Query: 9   ELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVE 59
           EL    +   LE+R   AAR  L + S ++K KQ QA+ ++   LFL+ ++
Sbjct: 645 ELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLK 695


>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
           sapiens]
          Length = 533

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 147 LPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACL 194
           +P+E+L+ IF  +V++D  +  L + + VCR +   A  P +W    L
Sbjct: 115 IPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTL 162


>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
           sapiens]
          Length = 539

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 147 LPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACL 194
           +P+E+L+ IF  +V++D  +  L + + VCR +   A  P +W    L
Sbjct: 115 IPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTL 162


>gi|110735439 Werner syndrome protein [Homo sapiens]
          Length = 1432

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)

Query: 13  GVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVE-----EEQNGALY 67
           GV  + L+    RA   SL  T  + +  ++Q++EE   ++  K+ E     + +N   Y
Sbjct: 377 GVEDNKLKENMERACLMSLDITEHELQILEQQSQEEYLSDIAYKSTEHLSPNDNENDTSY 436

Query: 68  EAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLS 117
                    ++   D+E ++    SP+ +    SY+ ++D+D +M  L S
Sbjct: 437 --------VIESDEDLEMEMLKHLSPNDNENDTSYVIESDEDLEMEMLKS 478


>gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent
           helicase, partial [Homo sapiens]
          Length = 1140

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)

Query: 13  GVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVE-----EEQNGALY 67
           GV  + L+    RA   SL  T  + +  ++Q++EE   ++  K+ E     + +N   Y
Sbjct: 85  GVEDNKLKENMERACLMSLDITEHELQILEQQSQEEYLSDIAYKSTEHLSPNDNENDTSY 144

Query: 68  EAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLS 117
                    ++   D+E ++    SP+ +    SY+ ++D+D +M  L S
Sbjct: 145 --------VIESDEDLEMEMLKHLSPNDNENDTSYVIESDEDLEMEMLKS 186


>gi|118766328 transmembrane and tetratricopeptide repeat containing
           4 isoform 2 [Homo sapiens]
          Length = 741

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 30  SLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYE---AIKFYRRAMQLVPDIEFK 86
           SL  + A+  GK ++ KE +A  LFLKA++   N A Y    A+ ++R     +    ++
Sbjct: 653 SLMFSLANVLGKSQKYKESEA--LFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYE 710

Query: 87  ITYTRSPDGDGVGNSY 102
           I+    P   G   +Y
Sbjct: 711 ISLQLDPTASGTKENY 726


>gi|118766330 transmembrane and tetratricopeptide repeat containing
           4 isoform 1 [Homo sapiens]
          Length = 760

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 30  SLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYE---AIKFYRRAMQLVPDIEFK 86
           SL  + A+  GK ++ KE +A  LFLKA++   N A Y    A+ ++R     +    ++
Sbjct: 672 SLMFSLANVLGKSQKYKESEA--LFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYE 729

Query: 87  ITYTRSPDGDGVGNSY 102
           I+    P   G   +Y
Sbjct: 730 ISLQLDPTASGTKENY 745


>gi|239741055 PREDICTED: similar to PRAME family member 10 [Homo
           sapiens]
          Length = 426

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 187 EIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRA 246
           E+W+   L   G+    L   ++ RE+F  R      G +I    Y+   +      Y +
Sbjct: 211 EVWKKCSLNKTGKFAPYLSQMSNLRELFFPRYLKNPLGAFIFSDAYLADRDMECLSQYPS 270

Query: 247 WHQVEYYRYIRFFPDGHVMMLTTPEEPQSIV 277
             Q++  R I      H++M TT  EP  ++
Sbjct: 271 LSQLKELRLI------HILMWTTHLEPLGVL 295


>gi|239741051 PREDICTED: similar to PRAME family member 10 [Homo
           sapiens]
          Length = 426

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 187 EIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRA 246
           E+W+   L   G+    L   ++ RE+F  R      G +I    Y+   +      Y +
Sbjct: 211 EVWKKCSLNKTGKFAPYLSQMSNLRELFFPRYLKNPLGAFIFSDAYLTDRDMECLSQYPS 270

Query: 247 WHQVEYYRYIRFFPDGHVMMLTTPEEPQSIV 277
             Q++  R I      H++M TT  EP  ++
Sbjct: 271 LSQLKELRLI------HILMWTTNLEPLGVL 295


>gi|157743247 F-box protein 45 [Homo sapiens]
          Length = 286

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 8/52 (15%)

Query: 147 LPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICA---RDPEIWRLACLK 195
           LP  VL  +F +     L+L  L   +LVC+ +Y C     + E+WR  C +
Sbjct: 39  LPSRVLELVFSY-----LELSELRSCALVCKHWYRCLHGDENSEVWRSLCAR 85


>gi|130980075 centromere protein J [Homo sapiens]
          Length = 1338

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 17  SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVE 59
           +N+E RP +AA G  ++T  D   +Q Q +E++ ++  LK  E
Sbjct: 320 ANIEERPIKAAIGERKQTFEDYLEEQIQLEEQELKQKQLKEAE 362


>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
          Length = 843

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 147 LPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVW 197
           LP EV++ IF +++  DL      + + VC+ F   A DP +W+   ++V+
Sbjct: 75  LPDEVVLKIFSYLLEQDLC-----RAACVCKRFSELANDPILWKRLYMEVF 120


>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
          Length = 686

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 147 LPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVW 197
           LP EV++ IF +++  DL      + + VC+ F   A DP +W+   ++V+
Sbjct: 75  LPDEVVLKIFSYLLEQDLC-----RAACVCKRFSELANDPILWKRLYMEVF 120


>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
          Length = 585

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 147 LPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVW 197
           LP EV++ IF +++  DL      + + VC+ F   A DP +W+   ++V+
Sbjct: 75  LPDEVVLKIFSYLLEQDLC-----RAACVCKRFSELANDPILWKRLYMEVF 120


>gi|7656959 calpain 7 [Homo sapiens]
          Length = 813

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 25  RAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQL 79
           +A   ++Q  SAD    + Q   E+A  L  +A +E++   + +AI+ Y  A+ L
Sbjct: 65  QALHSAVQSKSADPLKSKHQLDLERAHFLVTQAFDEDEKENVEDAIELYTEAVDL 119


>gi|122937219 F-box protein 41 [Homo sapiens]
          Length = 936

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%)

Query: 135 PELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACL 194
           P   +  I   +L M   ++     + + LD R+L   + VCR +   AR P +W    L
Sbjct: 600 PSRSNEVISPEILKMRAALFC----IFTYLDTRTLLHAAEVCRDWRFVARHPAVWTRVLL 655

Query: 195 KVWGRSCIKLVPY-----TSWREMFLERPRVRFDGVYISKTTYIRQGEQSLD 241
           +   R C K +       T    + L+  + R  G   SK  Y R     L+
Sbjct: 656 EN-ARVCSKFLAMLAQWCTQAHSLTLQNLKPRQRGKKESKEEYARSTRGCLE 706


>gi|192807292 keratin 24 [Homo sapiens]
          Length = 525

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 22/108 (20%)

Query: 9   ELAPGVSSSNLENRPCRAARGSLQKTSADTK-GKQEQAKEEKARELFLKAVEEE------ 61
           EL   + +  +E +   A + SL+ T ADT+ G   Q  E + +   + A+EEE      
Sbjct: 363 ELKRTLQALEIELQSQLAMKSSLEGTLADTEAGYVAQLSEIQTQ---ISALEEEICQIWG 419

Query: 62  ----QNGALYEAIKFYRRAMQLVPDIEFKI-TYTRSPDGDGVGNSYIE 104
               QN         Y++ + +   +E +I TY R  DG+G G+S+ E
Sbjct: 420 ETKCQNAE-------YKQLLDIKTRLEVEIETYRRLLDGEGGGSSFAE 460


>gi|4759082 serum deprivation response protein [Homo sapiens]
          Length = 425

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 3/111 (2%)

Query: 20  ENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQL 79
           E+R  +  R SL+K  +  K    Q  E+K  +L  K V  E+   + +++    + +  
Sbjct: 225 ESRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTSNHQKISS 284

Query: 80  VPDIEFKI---TYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQE 127
                FK+   T+ R    +G  ++  E   +D   ++ +   Q++ +F E
Sbjct: 285 GKSSPFKVSPLTFGRKKVREGESHAENETKSEDLPSSEQMPNDQEEESFAE 335


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 78  QLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPEL 137
           QL P  E   T   +P+ DG      E   +D      L   QQ++  QE++LK C+  +
Sbjct: 250 QLEPQAEV-FTKEENPESDG------EPVVEDGTSVKTLETLQQRVKRQENLLKRCKETI 302

Query: 138 ESSQIHISVLPME 150
           +S +   ++L  E
Sbjct: 303 QSHKEQCTLLTSE 315


>gi|40254924 leucine rich repeat containing 59 [Homo sapiens]
          Length = 307

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 22  RPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVP 81
           R     R + +K  A  + K+ Q +E + RE   KA E+E+    Y+A+K  +R  +  P
Sbjct: 161 RRLEVEREAEKKREAKQRAKEAQERELRKRE---KAEEKERRRKEYDALKAAKREQEKKP 217

Query: 82  DIE 84
             E
Sbjct: 218 KKE 220


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,440,195
Number of Sequences: 37866
Number of extensions: 683086
Number of successful extensions: 2157
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2142
Number of HSP's gapped (non-prelim): 33
length of query: 403
length of database: 18,247,518
effective HSP length: 105
effective length of query: 298
effective length of database: 14,271,588
effective search space: 4252933224
effective search space used: 4252933224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.