Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FBXO11 Sequence: fasta or formatted (843aa) NCBI GI: 30089926
Description:

F-box only protein 11 isoform 1

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [585aa] F-box only protein 11 isoform 3
alt prot [686aa] F-box only protein 11 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         51           2
 C cysteine            3.1         26           1
 D aspartate           5.1         43           2
 E glutamate           5.9         50           2
 F phenylalanine       4.0         34           2
 G glycine             9.8         83           2
 H histidine           4.7         40           2
 I isoleucine          8.4         71           2
 K lysine              4.3         36           2
 L leucine             4.7         40           2
 M methionine          1.8         15           2
 N asparagine          7.9         67           2
 P proline             3.9         33           2
 Q glutamine           3.3         28           2
 R arginine            5.3         45           2
 S serine              5.3         45           2
 T threonine           5.5         46           2
 V valine              5.5         46           2
 W tryptophan          0.9          8           1
 Y tyrosine            4.3         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein 11 isoform 1 
FBXO11                0.781   F-box only protein 11 isoform 2 
FBXO11                0.689   F-box only protein 11 isoform 3 
FBXO10                0.086   F-box protein 10 
UBR4                  0.022   retinoblastoma-associated factor 600 
FBXL7                 0.014   F-box and leucine-rich repeat protein 7 
FBXO15                0.013   F-box protein 15 isoform 2 
FBXO15                0.013   F-box protein 15 isoform 1 
FBXL5                 0.013   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.013   F-box and leucine-rich repeat protein 5 isoform 1 [H...
SKP2                  0.011   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.011   S-phase kinase-associated protein 2 isoform 2 
FBXL12                0.010   F-box and leucine-rich repeat protein 12 
FBXW5                 0.010   F-box and WD repeat domain containing 5 
FBXL20                0.010   F-box and leucine-rich repeat protein 20 
UBR5                  0.010   ubiquitin protein ligase E3 component n-recognin 5 [...
FBXO48                0.010   F-box protein 48 
FBXO8                 0.009   F-box only protein 8 
UBR7                  0.009   ubiquitin protein ligase E3 component n-recognin 7 ...
FBXL2                 0.009   F-box and leucine-rich repeat protein 2 
C1orf14               0.009   chromosome 1 open reading frame 14 
FBXL6                 0.009   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.009   F-box and leucine-rich repeat protein 6 isoform 1 [H...
LOC730429             0.008   PREDICTED: similar to ubiquitin protein ligase E3 c...
LOC730429             0.008   PREDICTED: similar to ubiquitin protein ligase E3 c...
FBXL4                 0.008   F-box and leucine-rich repeat protein 4 
FBXW8                 0.008   F-box and WD repeat domain containing 8 isoform 1 [H...
FBXL21                0.008   F-box and leucine-rich repeat protein 21 
KDM2B                 0.007   F-box and leucine-rich repeat protein 10 isoform a [...
KDM2B                 0.007   F-box and leucine-rich repeat protein 10 isoform b [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press