Guide to the Human Genome
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Name: FBXO48 Sequence: fasta or formatted (155aa) NCBI GI: 67003566
Description:

F-box protein 48

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          7           1
 C cysteine            3.2          5           1
 D aspartate           5.8          9           3
 E glutamate           9.0         14           1
 F phenylalanine       2.6          4           2
 G glycine             1.9          3           1
 H histidine           2.6          4           1
 I isoleucine          6.5         10           1
 K lysine              6.5         10           1
 L leucine             9.0         14           2
 M methionine          2.6          4           1
 N asparagine          7.7         12           3
 P proline             3.2          5           1
 Q glutamine           1.9          3           1
 R arginine            8.4         13           2
 S serine             11.0         17           1
 T threonine           3.9          6           1
 V valine              3.9          6           1
 W tryptophan          3.2          5           1
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 48 
FBXW2                 0.064   F-box and WD repeat domain containing 2 
FBXO11                0.057   F-box only protein 11 isoform 1 
FBXO11                0.057   F-box only protein 11 isoform 2 
FBXO11                0.057   F-box only protein 11 isoform 3 
FBXW7                 0.044   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.044   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.044   F-box and WD repeat domain containing 7 isoform 2 [H...
FBXW11                0.044   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.044   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.044   F-box and WD repeat domain containing 11 isoform B [...
FBXO16                0.044   F-box only protein 16 
FBXO8                 0.040   F-box only protein 8 
FBXO10                0.037   F-box protein 10 
BTRC                  0.037   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.037   beta-transducin repeat containing protein isoform 1 ...
FBXL20                0.034   F-box and leucine-rich repeat protein 20 
FBXL5                 0.034   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.034   F-box and leucine-rich repeat protein 5 isoform 1 [H...
FBXL2                 0.030   F-box and leucine-rich repeat protein 2 
FBXO24                0.027   F-box only protein 24 isoform 1 
FBXO9                 0.027   F-box only protein 9 isoform 1 
FBXO9                 0.027   F-box only protein 9 isoform 3 
FBXO9                 0.027   F-box only protein 9 isoform 2 
ECT2L                 0.023   epithelial cell transforming sequence 2 oncogene-li...
FBXL21                0.023   F-box and leucine-rich repeat protein 21 
FBXO39                0.023   F-box protein 39 
FBXO7                 0.020   F-box only protein 7 isoform 2 
FBXO7                 0.020   F-box only protein 7 isoform 1 
FBXW4                 0.017   F-box and WD repeat domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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