Guide to the Human Genome
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Name: LOC645382 Sequence: fasta or formatted (426aa) NCBI GI: 239741051
Description:

PREDICTED: similar to PRAME family member 10

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         18           2
 C cysteine            3.1         13           2
 D aspartate           4.0         17           1
 E glutamate           6.3         27           1
 F phenylalanine       4.9         21           2
 G glycine             3.8         16           1
 H histidine           2.1          9           1
 I isoleucine          3.1         13           1
 K lysine              5.2         22           2
 L leucine            17.4         74           2
 M methionine          3.3         14           1
 N asparagine          2.8         12           1
 P proline             6.3         27           1
 Q glutamine           4.2         18           1
 R arginine            7.5         32           2
 S serine              7.3         31           2
 T threonine           5.2         22           2
 V valine              4.9         21           1
 W tryptophan          2.1          9           1
 Y tyrosine            2.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to PRAME family member 10 
LOC645399             0.995   PREDICTED: similar to PRAME family member 10 
PRAMEF10              0.950   PRAME family member 10 
PRAMEF17              0.846   PRAME family member 17 
PRAMEF16              0.844   PRAME family member 16 
PRAMEF22              0.613   PRAME family member 22 
PRAMEF18              0.608   PRAME family member 18 
PRAMEF3               0.605   PRAME family member 3 
PRAMEF19              0.603   PRAME family member 19 
PRAMEF14              0.594   PRAME family member 14 
PRAMEF1               0.579   PRAME family member 1 
PRAMEF13              0.571   PRAME family member 13 
PRAMEF2               0.553   PRAME family member 2 
PRAMEF25              0.528   PREDICTED: PRAME family member 25-like 
LOC729516             0.469   PREDICTED: similar to Putative PRAME family member ...
PRAMEF8               0.469   PRAME family member 8 
PRAMEF12              0.468   PRAME family member 12 
PRAMEF7               0.466   PRAME family member 7 
PRAMEF20              0.441   PRAME family member 20 
PRAMEF21              0.441   PRAME family member 21 
PRAMEF15              0.423   PRAME family member 15 
PRAMEF9               0.423   PRAME family member 9 
PRAMEF5               0.421   PRAME family member 5 
PRAMEF6               0.421   PRAME family member 6 
PRAMEF23              0.419   PREDICTED: PRAME family member 23 
PRAMEF11              0.415   PREDICTED: PRAME family member 11 
PRAMEF4               0.412   PRAME family member 4 
PRAMEF11              0.359   PRAME family member 11 
PRAME                 0.355   preferentially expressed antigen in melanoma 
PRAME                 0.355   preferentially expressed antigen in melanoma 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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