Guide to the Human Genome
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Name: FBXO9 Sequence: fasta or formatted (447aa) NCBI GI: 6912546
Description:

F-box only protein 9 isoform 1

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [437aa] F-box only protein 9 isoform 2
alt prot [403aa] F-box only protein 9 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         27           2
 C cysteine            2.0          9           1
 D aspartate           6.3         28           3
 E glutamate           8.3         37           3
 F phenylalanine       5.1         23           2
 G glycine             3.8         17           1
 H histidine           2.2         10           2
 I isoleucine          4.9         22           2
 K lysine              4.9         22           3
 L leucine             8.5         38           2
 M methionine          2.5         11           2
 N asparagine          2.0          9           1
 P proline             4.7         21           2
 Q glutamine           6.0         27           3
 R arginine            7.8         35           2
 S serine              7.4         33           3
 T threonine           5.1         23           2
 V valine              5.8         26           2
 W tryptophan          1.8          8           1
 Y tyrosine            4.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein 9 isoform 1 
FBXO9                 0.971   F-box only protein 9 isoform 2 
FBXO9                 0.897   F-box only protein 9 isoform 3 
FBXO7                 0.027   F-box only protein 7 isoform 2 
FBXO7                 0.027   F-box only protein 7 isoform 1 
FBXW7                 0.018   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.012   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.012   F-box and WD repeat domain containing 7 isoform 2 [H...
DDRGK1                0.009   DDRGK domain containing 1 
FBXO48                0.009   F-box protein 48 
SFRS8                 0.009   splicing factor, arginine/serine-rich 8 
FBXL6                 0.009   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.009   F-box and leucine-rich repeat protein 6 isoform 1 [H...
MYST3                 0.008   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.008   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.008   MYST histone acetyltransferase (monocytic leukemia)...
WRN                   0.008   Werner syndrome protein 
LOC652522             0.008   PREDICTED: similar to Werner syndrome ATP-dependent...
OFD1                  0.008   oral-facial-digital syndrome 1 
PRPF40A               0.008   formin binding protein 3 
RNF20                 0.008   ring finger protein 20 
TMTC4                 0.008   transmembrane and tetratricopeptide repeat containi...
TMTC4                 0.008   transmembrane and tetratricopeptide repeat containi...
LOC645399             0.007   PREDICTED: similar to PRAME family member 10 
LOC645382             0.007   PREDICTED: similar to PRAME family member 10 
PPP1R15A              0.007   protein phosphatase 1, regulatory subunit 15A [Homo...
FBXO45                0.007   F-box protein 45 
KRT24                 0.007   keratin 24 
BRD4                  0.007   bromodomain-containing protein 4 isoform short 
BRD4                  0.007   bromodomain-containing protein 4 isoform long 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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