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Search of human proteins with 52630338
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo
sapiens]
(310 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo sa... 624 e-179
gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo sa... 433 e-122
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 422 e-118
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 422 e-118
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens] 46 4e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 45 8e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 45 1e-04
gi|223633988 hypothetical protein LOC85379 [Homo sapiens] 43 4e-04
gi|239747180 PREDICTED: hypothetical protein XP_002343933 [Homo ... 43 4e-04
gi|236459851 ubinuclein 2 [Homo sapiens] 42 7e-04
gi|155029546 phosphofurin acidic cluster sorting protein 2 isofo... 42 0.001
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 42 0.001
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 41 0.001
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 41 0.001
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 41 0.001
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 41 0.001
gi|155029548 phosphofurin acidic cluster sorting protein 2 isofo... 40 0.002
gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 39 0.008
gi|214831495 hypothetical protein LOC285679 [Homo sapiens] 39 0.008
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 39 0.008
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 38 0.010
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 37 0.017
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 37 0.017
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 37 0.017
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|116812624 tau tubulin kinase 2 [Homo sapiens] 37 0.029
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 36 0.038
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 36 0.050
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 36 0.050
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 36 0.050
>gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo
sapiens]
Length = 310
Score = 624 bits (1610), Expect = e-179
Identities = 310/310 (100%), Positives = 310/310 (100%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPECATWQRCP 240
FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPECATWQRCP
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPECATWQRCP 240
Query: 241 TSGFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPRTYQV 300
TSGFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPRTYQV
Sbjct: 241 TSGFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPRTYQV 300
Query: 301 KRSGQQARLQ 310
KRSGQQARLQ
Sbjct: 301 KRSGQQARLQ 310
>gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo
sapiens]
Length = 363
Score = 433 bits (1114), Expect = e-122
Identities = 221/221 (100%), Positives = 221/221 (100%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLR 221
FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLR
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLR 221
>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 422 bits (1086), Expect = e-118
Identities = 216/229 (94%), Positives = 220/229 (96%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATH 229
FPASKSPASSPLTRSTPPVRGRAGPSGRAAAS T + A QP+ ++
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSN 229
>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 422 bits (1086), Expect = e-118
Identities = 216/229 (94%), Positives = 220/229 (96%)
Query: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ
Sbjct: 1 MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQ 60
Query: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK
Sbjct: 61 GVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLK 120
Query: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL
Sbjct: 121 DSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNL 180
Query: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATH 229
FPASKSPASSPLTRSTPPVRGRAGPSGRAAAS T + A QP+ ++
Sbjct: 181 FPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSN 229
>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
Length = 739
Score = 46.2 bits (108), Expect = 4e-05
Identities = 66/256 (25%), Positives = 94/256 (36%), Gaps = 46/256 (17%)
Query: 5 EEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRL 64
+ED+ + DE DF LS S S ED V P R ++ + N P +
Sbjct: 25 KEDILLLADEKFDFD-LSLSSSSANEDDEVFFGPFGHKERCIAASLELNNPVPEQPPLPT 83
Query: 65 S-----LGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPR------------- 106
S PL+ EK E+ EA+ LA +E + A + PR
Sbjct: 84 SESPFAWSPLAGEKFVEVYKEAHLLALHIESSSRNQAAQAAKPEDPRSQGVERFIQESKL 143
Query: 107 ---------RVKPSP---RRETFVLKDSPVRDLLPTVNS--LTRSTPSPSSLTPRLRSND 152
+K SP +RET+ L DSP+ L P V L S+P+ S + R
Sbjct: 144 KINLFEKEKEMKKSPTSLKRETYYLSDSPL--LGPPVGEPRLLASSPALPSSGAQARLTR 201
Query: 153 RKGSVRALRATSGKRPSNMKRESPTCNL---FPASKSPASSPLTRSTPPVRGRAGPSGRA 209
G + A + RES T + + P + L VRGR+ P
Sbjct: 202 APGPPHSAHA--------LPRESCTAHAASQAATQRKPGTKLLLPRAASVRGRSIPGAAE 253
Query: 210 AASEETRAAKLRACQP 225
+E A+ R P
Sbjct: 254 KPKKEIPASPSRTKIP 269
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.1 bits (105), Expect = 8e-05
Identities = 76/321 (23%), Positives = 112/321 (34%), Gaps = 47/321 (14%)
Query: 19 GGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPL--SPEKLEE 76
G S S S +E D+ +P++ S S P Q R P S +L
Sbjct: 1534 GQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSP 1593
Query: 77 ILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPR---RETFVLKDSPVRDLLPTVNS 133
+ ++ R +G P P+PR R + S R P +S
Sbjct: 1594 RRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSS 1653
Query: 134 LTRSTPS--PSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRE-SPTCNLFPASKSPASS 190
T S+P P S T R S R +R S E + L S+S +SS
Sbjct: 1654 STESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSS 1713
Query: 191 PLTRSTPPVRGRAGPS---------------GRAAASEETRAAKLRACQP---------- 225
P TRS P R R PS R+A+S T+ R P
Sbjct: 1714 PETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRS 1773
Query: 226 -NATHQPECATWQRCPTSGFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQ 284
+ + + + T +R SG S ++ R + R++ + GS G HS+
Sbjct: 1774 RSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGS----------GYHSR 1823
Query: 285 QSAAPQESGSPRTYQVKRSGQ 305
+P S RT +R G+
Sbjct: 1824 ---SPARQESSRTSSRRRRGR 1841
Score = 32.7 bits (73), Expect = 0.42
Identities = 64/298 (21%), Positives = 100/298 (33%), Gaps = 30/298 (10%)
Query: 24 SDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANR 83
S R T P P + + +A P+P R S GP P + +
Sbjct: 317 STQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGG 376
Query: 84 LAAQLEQCAL-QDRESAGEGLGPRRVKPSPRR-----ETFVLKDSPVRDLLPTVNSLTRS 137
L L Q+ + P R + P+ ++ + SP V+ S
Sbjct: 377 SPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASS 436
Query: 138 TPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPT-CNLFPASKSPASSPLTRS- 195
+P P S+ S + S R K S T S+SPA++ RS
Sbjct: 437 SPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSR 496
Query: 196 --TPPVRGRA---GPSGRAAASEETRAAKLRACQPNATHQPECATWQRCPTSGFSVNSKR 250
TP RG + P R + S + + + P+ W R S N++R
Sbjct: 497 SRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSR------SRNTQR 550
Query: 251 ASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPRTYQVKRSGQQAR 308
R++SA + S PAT+ +S P G R+ R ++R
Sbjct: 551 RG-----RSRSARRGRSHSRSPATRG------RSRSRTPARRGRSRSRTPARRRSRSR 597
Score = 32.3 bits (72), Expect = 0.55
Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 26/151 (17%)
Query: 129 PTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPA 188
P +RS SP + R RS R V R+ S P+ +R L P +S +
Sbjct: 1988 PVTRRRSRSRTSPVT---RRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRS 2044
Query: 189 SSP--------------------LTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNAT 228
SP LTRS P +R R S ++S+ +R+A A + ++
Sbjct: 2045 RSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRR---SASGSSSDRSRSATPPATRNHSG 2101
Query: 229 HQPECATWQRCPTSGFSVNSKRASKTKHCRT 259
+ S FS S + CR+
Sbjct: 2102 SRTPPVALNSSRMSCFSRPSMSPTPLDRCRS 2132
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/192 (25%), Positives = 73/192 (38%), Gaps = 34/192 (17%)
Query: 106 RRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSG 165
RR PSP + V P + RS+P +P L S RKGS +
Sbjct: 623 RRASPSPPPKRRVSHSPPPKQ---------RSSPVTKRRSPSLSSKHRKGSSPSRSTREA 673
Query: 166 KRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVR--GRAGPSGRAAASEETRAAKLRAC 223
+ P KR SP+ P ++P +S S PPVR + P R + S TR +
Sbjct: 674 RSPQPNKRHSPS----PRPRAPQTS---SSPPPVRRGASSSPQRRQSPSPSTRPIR---- 722
Query: 224 QPNATHQPECATWQRCPTSGFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHS 283
+ + T +P+ + + + R S+ + GS PA K
Sbjct: 723 RVSRTPEPK------------KIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSP 770
Query: 284 QQSAAPQESGSP 295
QS +P + SP
Sbjct: 771 VQSQSPSTNWSP 782
Score = 42.4 bits (98), Expect = 5e-04
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 45/286 (15%)
Query: 44 RGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGL 103
R HR+ + +PAP+ EK E+ + + ++++ ++Q+ S + L
Sbjct: 199 RSPRHRTKSRSPSPAPE---------KKEKTPELPEPS----VKVKEPSVQEATSTSDIL 245
Query: 104 G-------PRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRS---TPSPSSLTPRLRSNDR 153
P +PSP + + K+ S +RS + SPS PR R R
Sbjct: 246 KVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSR 305
Query: 154 KGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGR----AGPSGRA 209
S R RPS +R SP P + P RS PVR R A SG +
Sbjct: 306 SRSYSPRR-----RPSPRRRPSPR-RRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS 359
Query: 210 AASEETRAAKLRACQPNATHQPECATWQRCPTSGFSVNSKRAS-------KTKHCRTQSA 262
++S +R+ P T P T + P++ R S KT+H T
Sbjct: 360 SSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQ 419
Query: 263 GKWTQGSCFPATKSSCHG-----CHSQQSAAPQESGSPRTYQVKRS 303
T+ S + G +++ +P + PR ++ S
Sbjct: 420 SNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSES 465
Score = 38.1 bits (87), Expect = 0.010
Identities = 74/320 (23%), Positives = 119/320 (37%), Gaps = 54/320 (16%)
Query: 22 SPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEA 81
+P S V V+P + + H+ +P+P + P E E D+
Sbjct: 416 TPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP-----APKPRKVELSESEEDKG 470
Query: 82 NRLAA-----QLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTR 136
++AA Q Q Q+++S+ + G R + +K+ V R
Sbjct: 471 GKMAAADSVQQRRQYRRQNQQSSSDS-GSSSSSEDERPKRSHVKNGEV-------GRRRR 522
Query: 137 STPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESP----------TCNLFPASKS 186
+PS S+ +P R ++ S R R S P +R SP T P ++
Sbjct: 523 HSPSRSA-SPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581
Query: 187 PASSPLTRS------TPPVRGRAGPS---GRAAAS----EETRAAKLRACQPNATHQPEC 233
P+ P RS +PP++ R PS R AS + RA+ + +H P
Sbjct: 582 PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPP- 640
Query: 234 ATWQRCPTSGFSVNSKRAS---KTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQ 290
P S +KR S +KH + S + T+ + P + + S + APQ
Sbjct: 641 ------PKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSP--QPNKRHSPSPRPRAPQ 692
Query: 291 ESGSPRTYQVKRSGQQARLQ 310
S SP + S R Q
Sbjct: 693 TSSSPPPVRRGASSSPQRRQ 712
Score = 30.0 bits (66), Expect = 2.7
Identities = 57/250 (22%), Positives = 88/250 (35%), Gaps = 40/250 (16%)
Query: 22 SPSDSREEEDITVLVTPEKPLRRGLSHRSDP---NAVAPAPQGVRLSLGPLSPEKLEEIL 78
SPS R I +P P +R + P A P R+S P ++ +
Sbjct: 590 SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVT 649
Query: 79 DEANRLAAQLEQCALQDRESAGEGLGP---RRVKPSPRRETFVLKDSPVRDLLPTVNS-L 134
+ + + S E P +R PSPR SP +S
Sbjct: 650 KRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQ 709
Query: 135 TRSTPSPS-------SLTPRLRSNDRKGS--------VRALRATSGKR----------PS 169
R +PSPS S TP + + S V + R+ SG PS
Sbjct: 710 RRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPS 769
Query: 170 NMKRESPTCNLFPA-----SKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQ 224
++ +SP+ N PA +KSP SP S P + G + ++ + K + +
Sbjct: 770 PVQSQSPSTNWSPAVPVKKAKSPTPSP---SPPRNSDQEGGGKKKKKKKDKKHKKDKKHK 826
Query: 225 PNATHQPECA 234
+ H+ E A
Sbjct: 827 KHKKHKKEKA 836
>gi|223633988 hypothetical protein LOC85379 [Homo sapiens]
Length = 1806
Score = 42.7 bits (99), Expect = 4e-04
Identities = 61/220 (27%), Positives = 86/220 (39%), Gaps = 46/220 (20%)
Query: 21 LSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDE 80
L+P +E+D+ +P LR P++ P+P G LS E + LD
Sbjct: 66 LAPKPFSKEQDVK---SPVPSLR--------PSSTGPSPSG------GLSEEPAAKDLD- 107
Query: 81 ANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPS 140
NR+ + Q G G GPR P + F+ S L T S
Sbjct: 108 -NRMPGLVGQ-------EVGSGEGPRTSSPLFNKAVFLRPSSSTMILFETTKS------- 152
Query: 141 PSSLTPRLRSNDRKGSVRALRATSGKRPS-NMKRESPTCNLFPASKSPASSPLTRST-PP 198
P L +G+ A SG RP K PT PA P S+PL++ T PP
Sbjct: 153 ----GPALGKAVSEGAEEAKLGVSGSRPEVAAKPALPTQK--PAGTLPRSAPLSQDTKPP 206
Query: 199 V----RGRAGPSGRAAASEETRAAKLRACQPNATHQPECA 234
V G+ P +A++ E+T A L +P +P A
Sbjct: 207 VPQEEAGQDHPPSKASSVEDT-ARPLVEPRPRLKRRPVSA 245
>gi|239747180 PREDICTED: hypothetical protein XP_002343933 [Homo
sapiens]
Length = 1595
Score = 42.7 bits (99), Expect = 4e-04
Identities = 61/220 (27%), Positives = 86/220 (39%), Gaps = 46/220 (20%)
Query: 21 LSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDE 80
L+P +E+D+ +P LR P++ P+P G LS E + LD
Sbjct: 66 LAPKPFSKEQDVK---SPVPSLR--------PSSTGPSPSG------GLSEEPAAKDLD- 107
Query: 81 ANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPS 140
NR+ + Q G G GPR P + F+ S L T S
Sbjct: 108 -NRMPGLVGQ-------EVGSGEGPRTSSPLFNKAVFLRPSSSTMILFETTKS------- 152
Query: 141 PSSLTPRLRSNDRKGSVRALRATSGKRPS-NMKRESPTCNLFPASKSPASSPLTRST-PP 198
P L +G+ A SG RP K PT PA P S+PL++ T PP
Sbjct: 153 ----GPALGKAVSEGAEEAKLGVSGSRPEVAAKPALPTQK--PAGTLPRSAPLSQDTKPP 206
Query: 199 V----RGRAGPSGRAAASEETRAAKLRACQPNATHQPECA 234
V G+ P +A++ E+T A L +P +P A
Sbjct: 207 VPQEEAGQDHPPSKASSVEDT-ARPLVEPRPRLKRRPVSA 245
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 42.0 bits (97), Expect = 7e-04
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 27/170 (15%)
Query: 110 PSPR-----RETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATS 164
PSP+ + + K S L+ N + T SPSS +P +GS + +
Sbjct: 1053 PSPKPSASPKPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSPNALV--AQGSHSSTNSPV 1110
Query: 165 GKRPS--NMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRA 222
K+PS N+ R+SPT NL P+S+ T PP + PS + S T +
Sbjct: 1111 HKQPSGMNISRQSPTLNLLPSSR-------TSGLPPTKNLQAPS-KLTNSSSTGTVGKNS 1162
Query: 223 CQPNATHQPECATWQRCPTSGFSVNSKRASKTKHCRTQSAGKWTQGSCFP 272
A + P + G ++NS A++T + G TQG+ P
Sbjct: 1163 LSGIAMNVP--------ASRGSNLNSSGANRTS--LSGGTGSGTQGATKP 1202
>gi|155029546 phosphofurin acidic cluster sorting protein 2 isoform
2 [Homo sapiens]
Length = 889
Score = 41.6 bits (96), Expect = 0.001
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 3 DLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLR---RGLSHRSDPNAVAPAP 59
+ EED+ + D TLD S S E+D +VL TP+ LR GLSH S + +
Sbjct: 281 EAEEDLDLLYD-TLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIG-SI 338
Query: 60 QGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVL 119
R P SP ++ ++ L + ++ D + G P PR
Sbjct: 339 HSARSHKEPPSP---ADVPEKTRSLGGRQPSDSVSDTVALG--------VPGPREHPGQP 387
Query: 120 KDSPVRDLLPTVNSLT-------RSTPSPSSLTPRLRSN----DRKGSVRALRATSGKRP 168
+DSP + T++ T R T + S + P RS R+G +L+ RP
Sbjct: 388 EDSPEAE-ASTLDVFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARP 446
Query: 169 SNMKRESPTCNLFPASKSPASSP 191
N + S P ++S P
Sbjct: 447 QNERANSLDNERCPDARSQLQIP 469
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 41.6 bits (96), Expect = 0.001
Identities = 55/218 (25%), Positives = 75/218 (34%), Gaps = 23/218 (10%)
Query: 43 RRGLSHRSDPNAVAPAPQG------VRLSLGPL-SPEKLEEILDEANRLAAQLEQCALQD 95
R GL+H P +AP P R P+ SPE E ++A +CA+
Sbjct: 54 REGLAH--PPQGLAPPPTAGNRPHPTRKCTFPVPSPELGAGREGEVAGVSACGRRCAVLG 111
Query: 96 RESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKG 155
+A G R P R V D L T RS+P+ S++ L R+G
Sbjct: 112 VRAAARGQLNSRTAPRDRHRG-VGPDPGRETALGTATLSLRSSPTAGSVSTGLVGKQREG 170
Query: 156 SVRALRAT----SGKR---------PSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGR 202
RA G R P+ + R +P P S SP RS PP R +
Sbjct: 171 GNGPWRAPVFRLPGARLRLSSQLPSPTTLPRAAPLTPYRPGSPSPRGHSRLRSRPPTRAQ 230
Query: 203 AGPSGRAAASEETRAAKLRACQPNATHQPECATWQRCP 240
+ R + +P C T CP
Sbjct: 231 LRVGANPLSPVPARLRGCHSVRPEGGGVRSCRTLGCCP 268
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 19/213 (8%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 99 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 158
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T K
Sbjct: 159 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT--------K 206
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTP-PVRGRAGPS----GRA 209
G AL P+ K + T P + S+P T P P ++ P+
Sbjct: 207 GP--ALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP 264
Query: 210 AASEETRAAKLRACQPNATHQPECATWQRCPTS 242
++E + P T +P T + PT+
Sbjct: 265 TTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT 297
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 19/213 (8%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 140 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 199
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T K
Sbjct: 200 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT--------K 247
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTP-PVRGRAGPS----GRA 209
G AL P+ K + T P + S+P T P P ++ P+
Sbjct: 248 GP--ALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP 305
Query: 210 AASEETRAAKLRACQPNATHQPECATWQRCPTS 242
++E + P T +P T + PT+
Sbjct: 306 TTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT 338
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 19/213 (8%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 192 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 251
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T K
Sbjct: 252 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT--------K 299
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTP-PVRGRAGPS----GRA 209
G AL P+ K + T P + S+P T P P ++ P+
Sbjct: 300 GP--ALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP 357
Query: 210 AASEETRAAKLRACQPNATHQPECATWQRCPTS 242
++E + P T +P T + PT+
Sbjct: 358 TTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT 390
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 19/213 (8%)
Query: 35 LVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ 94
+ TP+ + + P P R SL P S E L + ++
Sbjct: 233 VTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTT 292
Query: 95 DRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRK 154
+++++ +G + K + +ET ++ + +DL PT L + TP + T K
Sbjct: 293 NKQTSTDG----KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTT--------K 340
Query: 155 GSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTP-PVRGRAGPS----GRA 209
G AL P+ K + T P + S+P T P P ++ P+
Sbjct: 341 GP--ALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP 398
Query: 210 AASEETRAAKLRACQPNATHQPECATWQRCPTS 242
++E + P T +P T + PT+
Sbjct: 399 TTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT 431
>gi|155029548 phosphofurin acidic cluster sorting protein 2 isoform
1 [Homo sapiens]
Length = 893
Score = 40.4 bits (93), Expect = 0.002
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 3 DLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLR---RGLSHRSDPNAVAPAP 59
+ EED+ + D TLD S S E+D +VL TP+ LR GLSH S + +
Sbjct: 281 EAEEDLDLLYD-TLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIG-SI 338
Query: 60 QGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVL 119
R P SP ++ ++ L + ++ D + G P PR
Sbjct: 339 HSARSHKEPPSP---ADVPEKTRSLGGRQPSDSVSDTVALG--------VPGPREHPGQP 387
Query: 120 KDSPVRDLLPTVNSLT-------RSTPSPSSLTPRLRSN----DRKGSVRALRATSGKRP 168
+DSP + T++ T R T + S + P RS R+G +L+ RP
Sbjct: 388 EDSPEAE-ASTLDVFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARP 446
Query: 169 SNMKRESPTCNLFPASKS 186
N + S P ++S
Sbjct: 447 QNERANSLDNERCPDARS 464
>gi|239742580 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 897
Score = 38.5 bits (88), Expect = 0.008
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 20/181 (11%)
Query: 126 DLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASK 185
D LP +S +R + +SL P + + + +R T RP + L P++
Sbjct: 560 DPLPATSSHSRDSAQVTSLIPATFTAASRDA--GMRRT---RPGTSAPAAAAAALPPSTL 614
Query: 186 SPASSPLTRSTPPVRGRAGPS---GRAAASEETRAAKLRACQPNATHQPECATWQRCPTS 242
+P S L + GPS A A+ + +++R Q + T + + +S
Sbjct: 615 NPTSGSLLNAVD-----GGPSHFLASATAAARAQRSEVRYNQRSQTSRTRSCLKRNASSS 669
Query: 243 GFS-------VNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSP 295
S + +R + HC+ + T P SS H C ++ AP ++ +P
Sbjct: 670 SHSSTEGLQELKRRRGPASSHCQLAHSSSNTVSEDGPQAVSSGHRCENKAGTAPGQTLAP 729
Query: 296 R 296
R
Sbjct: 730 R 730
Score = 36.2 bits (82), Expect = 0.038
Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 17/179 (9%)
Query: 126 DLLPTVNSLTRSTPSPSSLTPR-LRSNDRKGSVRALR-----ATSGKRPSNMKRESPTC- 178
D LP + +R T +SL P + R +R R AT+ PS + S +
Sbjct: 289 DPLPATSYHSRDTAQVTSLIPATFTAASRDAGMRRTRSAPAAATAAPPPSTLNNTSGSLL 348
Query: 179 NLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPECATWQR 238
N S + T + R + R+ S K A +++H
Sbjct: 349 NAVDGGPSHFLASATAAARAQRSEVRYNQRSQTSRTRSCLKRNASSSSSSHSS------- 401
Query: 239 CPTSGFS-VNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPR 296
T G + +R + HC+ + T P SS H C ++ AP ++ +PR
Sbjct: 402 --TEGLQELKRRRGPASSHCQLAHSSSNTVSEDGPQAVSSGHRCENKAGTAPGQTLAPR 458
>gi|214831495 hypothetical protein LOC285679 [Homo sapiens]
Length = 277
Score = 38.5 bits (88), Expect = 0.008
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 161 RATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKL 220
R GK SP L P + P+S P T V PS +++ L
Sbjct: 149 RGGRGKASPTSFHVSPRAPLAPLASMPSSVPKTS----VESLGSPSSLSSSKPREPLCPL 204
Query: 221 RACQPNATHQPECATWQRCPTSGFSVNSKRASKTKHCRTQSAGKWTQGSCFP 272
+ + +HQP +T PTS +++ +T H AG+W QGS FP
Sbjct: 205 K----HPSHQPPASTLSPNPTS----STESLGETPH-----AGRWRQGSRFP 243
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 38.5 bits (88), Expect = 0.008
Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 45/178 (25%)
Query: 38 PEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRE 97
P+KPLRR LS R+ P PAP A +L+ C+L E
Sbjct: 908 PQKPLRRALSGRASP---VPAP-------------------SSGLHAAVRLKACSLAASE 945
Query: 98 --SAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKG 155
S+ + GP +P P SP + +R ++P +++ ++
Sbjct: 946 GLSSAQPNGPPEAEPRP-------PQSPASTASFIFSKGSRKLQLERPVSPETQADLQRN 998
Query: 156 SVRALRATSGKRPSNMKRESPTCN-----------LFPASKS-PASSPLTRSTPPVRG 201
V LR+ S +RP ++SP PAS S P + PLT PP G
Sbjct: 999 LVAELRSISEQRPPQAPKKSPKAPPPVARKPSVGVPPPASPSYPRAEPLT--APPTNG 1054
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 38.1 bits (87), Expect = 0.010
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 11/172 (6%)
Query: 30 EDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLE 89
++ L PE ++ S P V +PQG+ L+L E L + D++ ++ +
Sbjct: 2377 DETKALPLPEASVKTDTGTESKPQGVIRSPQGLELALPSRDSEVLSAVADDSLAVSHKDS 2436
Query: 90 QCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLL---PTVNSLTRST-PSPSSLT 145
A E P ++PSP LK+SP RD L P + PS L
Sbjct: 2437 LEASPVLEDNSSHKTPDSLEPSP------LKESPCRDSLESSPVEPKMKAGIFPSHFPLP 2490
Query: 146 PRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTP 197
+ + V ++R+ + P E + +S SPL+ TP
Sbjct: 2491 AAVAKTELLTEVASVRSRLLRDPDG-SAEDDSLEQTSLMESSGKSPLSPDTP 2541
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 37.4 bits (85), Expect = 0.017
Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
Query: 38 PEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRE 97
P P R+G + VAP P R GP S +L E R QD
Sbjct: 151 PPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRR--------GKQDLL 202
Query: 98 SAGEGL---------GPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRS-TPSPSSLTPR 147
SA GL GPR P R V S R P + TR+ P+P + R
Sbjct: 203 SADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRAR--APDTKAGTRARDPAPGASQLR 260
Query: 148 LRSNDRKGSVRALRATSGKRP-SNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAG 204
+ +G A R P + +E+ L S S A+ P PP+RG G
Sbjct: 261 AAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAVP---PPPPLRGSVG 315
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 37.4 bits (85), Expect = 0.017
Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
Query: 38 PEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRE 97
P P R+G + VAP P R GP S +L E R QD
Sbjct: 151 PPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRR--------GKQDLL 202
Query: 98 SAGEGL---------GPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRS-TPSPSSLTPR 147
SA GL GPR P R V S R P + TR+ P+P + R
Sbjct: 203 SADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRAR--APDTKAGTRARDPAPGASQLR 260
Query: 148 LRSNDRKGSVRALRATSGKRP-SNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAG 204
+ +G A R P + +E+ L S S A+ P PP+RG G
Sbjct: 261 AAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAVP---PPPPLRGSVG 315
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 37.4 bits (85), Expect = 0.017
Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
Query: 38 PEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRE 97
P P R+G + VAP P R GP S +L E R QD
Sbjct: 150 PPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPELRR--------GKQDLL 201
Query: 98 SAGEGL---------GPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRS-TPSPSSLTPR 147
SA GL GPR P R V S R P + TR+ P+P + R
Sbjct: 202 SADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRAR--APDTKAGTRARDPAPGASQLR 259
Query: 148 LRSNDRKGSVRALRATSGKRP-SNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAG 204
+ +G A R P + +E+ L S S A+ P PP+RG G
Sbjct: 260 AAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAVP---PPPPLRGSVG 314
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 37.0 bits (84), Expect = 0.022
Identities = 43/177 (24%), Positives = 65/177 (36%), Gaps = 27/177 (15%)
Query: 152 DRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAA 211
+RK + + RA+S + S TC+ S T ST + +G S +
Sbjct: 3 ERKAACKQHRASSSSCSCQSSQTSSTCS--------CQSSQTSSTCSCQS-SGTSSTSCN 53
Query: 212 SEETRAAKLRACQPNATHQPECATWQR-------CPTSGFSVNS-----KRASKTKHC-- 257
+ +R + +CQ + T C+ C +SG S S R S T C
Sbjct: 54 WQSSRISSTCSCQSSGTSSTSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQS 113
Query: 258 -RTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPRT---YQVKRSGQQARLQ 310
RT S Q S +T SC + + + Q S + T YQ R+ Q
Sbjct: 114 SRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQ 170
Score = 30.0 bits (66), Expect = 2.7
Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 28/180 (15%)
Query: 156 SVRALRATSGKRPSNMKRESPTCNLFPASKSPAS----SPLTRSTPPVRGRAGPSGRAAA 211
S + R +S R S TC+ + S S S T ST + +G S + +
Sbjct: 145 SCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQS-SGTSSTSYS 203
Query: 212 SEETRAAKLRACQPNATHQPECATWQR-------CPTSGFSVNS-----KRASKTKHCRT 259
+ + + +CQ + T C+ C +SG S S R S T C++
Sbjct: 204 CQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQS 263
Query: 260 ----------QSAGKWTQGSC-FPATKSSCHGCHSQQSAAPQESGSPRTYQVKRSGQQAR 308
QS+G + SC T S+ C S ++++ RT S Q +R
Sbjct: 264 SRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSR 323
Score = 28.5 bits (62), Expect = 7.9
Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 7/149 (4%)
Query: 162 ATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLR 221
+TS S+ + +C S + S +R++ R ++ + + S ++
Sbjct: 72 STSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQSSRTSSTSCSCQSSRTSST 131
Query: 222 ACQPNATHQPECATWQRCPTSGFSVN--SKRASKTKHCRTQSAGKWTQGSCFPATKSSCH 279
+C ++ + Q TS S + S R S T C++ + T S+C
Sbjct: 132 SCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTC- 190
Query: 280 GCHSQQSAAP----QESGSPRTYQVKRSG 304
C S +++ Q SG+ T + SG
Sbjct: 191 SCQSSGTSSTSYSCQSSGTSSTCSCQSSG 219
Score = 28.5 bits (62), Expect = 7.9
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 24/130 (18%)
Query: 173 RESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPE 232
R S TC+ S T ST +G S + ++ +CQ + T
Sbjct: 254 RTSSTCS--------CQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTC 305
Query: 233 CATWQRCPTSGFSVNSKRASKTKHCRTQSAGK-------WTQG----SC---FPATKSSC 278
+ R ++ S S R S T C QS+G W+ G SC F T S+
Sbjct: 306 SCQFSRTSSTSCSCQSSRTSST--CSCQSSGTSSTSCICWSSGTSSTSCSGRFSGTSSTS 363
Query: 279 HGCHSQQSAA 288
C S +++
Sbjct: 364 CNCRSSGTSS 373
>gi|116812624 tau tubulin kinase 2 [Homo sapiens]
Length = 1244
Score = 36.6 bits (83), Expect = 0.029
Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 22/160 (13%)
Query: 137 STPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLT-RS 195
S+ S S L RL + GS + T K P + K+P SP+ R
Sbjct: 1100 SSNSDSDLFSRLAQILQNGSQKPRSTTQCKSPGSPHNP----------KTPPKSPVVPRR 1149
Query: 196 TPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPECATWQRCPTSGFSVNSKRASKTK 255
+P R+ R ++S +RA + Q +++ P + P+ S +S+R+ + +
Sbjct: 1150 SPSASPRSSSLPRTSSSSPSRAGRPHHDQRSSS--PHLGRSKSPPSHSGSSSSRRSCQQE 1207
Query: 256 HCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSP 295
HC+ G GS HS + PQ P
Sbjct: 1208 HCKPSKNGLKGSGSLHH---------HSASTKTPQGKSKP 1238
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 36.2 bits (82), Expect = 0.038
Identities = 71/292 (24%), Positives = 114/292 (39%), Gaps = 37/292 (12%)
Query: 21 LSPSDS---REEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEI 77
LSPS S REE+ + + PL GL P + + LSLG +P
Sbjct: 1543 LSPSKSLINREEQWVHREPSESSPLALGLQ---TPLQIDCSESSPSLSLGGFTPNSEPAS 1599
Query: 78 LDE-ANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTR 136
DE N + + C + + S+G +++ SP F +D+ ++N L R
Sbjct: 1600 SDEHTNLFTSAIGSCRVSNPNSSGR----KKLTDSPG--LFSAQDT-------SLNRLHR 1646
Query: 137 STPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRST 196
PS N+R A + +PS ES C+ ++ +SS T ST
Sbjct: 1647 KESLPS--------NERAVQTLAGSQPTSDKPSQRPSESTNCS---PTRKRSSSESTSST 1695
Query: 197 PPVRGRAGPSGRAAAS-EETRAAKLRACQPNATHQPECATWQRCPTSGFSVNSKRASKTK 255
V G S R AS +++ + L+ N +P + + + S ++
Sbjct: 1696 --VNGVPSRSPRLVASGDDSVDSLLQRMVQNEDQEPMEKSIDAVIATASAPPSSSPGRS- 1752
Query: 256 HCRTQSAGKWTQGSCFPATKSSCHGCHSQQSAAPQESGSPRTYQVKRSGQQA 307
H + ++ GK T SC+ S S S SP + +KRS +A
Sbjct: 1753 HSKDRTLGKPDSLLVPAVTSDSCNNSISLLSEKLTSSCSP--HHIKRSVVEA 1802
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 35.8 bits (81), Expect = 0.050
Identities = 52/190 (27%), Positives = 68/190 (35%), Gaps = 38/190 (20%)
Query: 121 DSPVRDLLPTVNSLTRSTPSPS------SLTPRLRSNDRKGSVRALRATSGKRPSNMKRE 174
DS R + TRS P S S P S + GS R A G RP
Sbjct: 76 DSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGS-RLRPAAPGPRPG----- 129
Query: 175 SPTCNLFPASKSPASSPLTRSTPPVR---GRAGPSGRAAASEETRAAKLRACQPNATHQP 231
C+ AS +PA+ T P R G +GP R S++ A R A QP
Sbjct: 130 ---CSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSR-----AGGQP 181
Query: 232 ECATWQRCPTS-----------GFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHG 280
T +RC + G + S+ S T +S G W G P T ++
Sbjct: 182 PPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGT---GARSCGTWGSGG-GPGTAAASSP 237
Query: 281 CHSQQSAAPQ 290
S +PQ
Sbjct: 238 SADFSSDSPQ 247
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 35.8 bits (81), Expect = 0.050
Identities = 52/190 (27%), Positives = 68/190 (35%), Gaps = 38/190 (20%)
Query: 121 DSPVRDLLPTVNSLTRSTPSPS------SLTPRLRSNDRKGSVRALRATSGKRPSNMKRE 174
DS R + TRS P S S P S + GS R A G RP
Sbjct: 76 DSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGS-RLRPAAPGPRPG----- 129
Query: 175 SPTCNLFPASKSPASSPLTRSTPPVR---GRAGPSGRAAASEETRAAKLRACQPNATHQP 231
C+ AS +PA+ T P R G +GP R S++ A R A QP
Sbjct: 130 ---CSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSR-----AGGQP 181
Query: 232 ECATWQRCPTS-----------GFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHG 280
T +RC + G + S+ S T +S G W G P T ++
Sbjct: 182 PPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGT---GARSCGTWGSGG-GPGTAAASSP 237
Query: 281 CHSQQSAAPQ 290
S +PQ
Sbjct: 238 SADFSSDSPQ 247
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 35.8 bits (81), Expect = 0.050
Identities = 52/190 (27%), Positives = 68/190 (35%), Gaps = 38/190 (20%)
Query: 121 DSPVRDLLPTVNSLTRSTPSPS------SLTPRLRSNDRKGSVRALRATSGKRPSNMKRE 174
DS R + TRS P S S P S + GS R A G RP
Sbjct: 76 DSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGS-RLRPAAPGPRPG----- 129
Query: 175 SPTCNLFPASKSPASSPLTRSTPPVR---GRAGPSGRAAASEETRAAKLRACQPNATHQP 231
C+ AS +PA+ T P R G +GP R S++ A R A QP
Sbjct: 130 ---CSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSR-----AGGQP 181
Query: 232 ECATWQRCPTS-----------GFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHG 280
T +RC + G + S+ S T +S G W G P T ++
Sbjct: 182 PPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGT---GARSCGTWGSGG-GPGTAAASSP 237
Query: 281 CHSQQSAAPQ 290
S +PQ
Sbjct: 238 SADFSSDSPQ 247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,040,055
Number of Sequences: 37866
Number of extensions: 749919
Number of successful extensions: 3521
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 3289
Number of HSP's gapped (non-prelim): 468
length of query: 310
length of database: 18,247,518
effective HSP length: 102
effective length of query: 208
effective length of database: 14,385,186
effective search space: 2992118688
effective search space used: 2992118688
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.