Guide to the Human Genome
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Name: PSRC1 Sequence: fasta or formatted (310aa) NCBI GI: 52630338
Description:

proline/serine-rich coiled-coil 1 isoform b

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [333aa] proline/serine-rich coiled-coil 1 isoform a
alt prot [363aa] proline/serine-rich coiled-coil 1 isoform c
alt prot [333aa] proline/serine-rich coiled-coil 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         27           3
 C cysteine            2.9          9           1
 D aspartate           3.9         12           1
 E glutamate           6.8         21           3
 F phenylalanine       1.9          6           1
 G glycine             6.1         19           2
 H histidine           1.6          5           1
 I isoleucine          1.0          3           1
 K lysine              4.8         15           1
 L leucine             8.4         26           2
 M methionine          0.6          2           1
 N asparagine          2.6          8           1
 P proline             9.7         30           2
 Q glutamine           5.2         16           2
 R arginine           10.6         33           2
 S serine             12.9         40           2
 T threonine           6.8         21           1
 V valine              4.5         14           1
 W tryptophan          0.6          2           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline/serine-rich coiled-coil 1 isoform b 
PSRC1                 0.681   proline/serine-rich coiled-coil 1 isoform c 
PSRC1                 0.663   proline/serine-rich coiled-coil 1 isoform a 
PSRC1                 0.663   proline/serine-rich coiled-coil 1 isoform a 
GTSE1                 0.035   G-2 and S-phase expressed 1 
SRRM2                 0.033   splicing coactivator subunit SRm300 
SRRM1                 0.033   serine/arginine repetitive matrix 1 
KIAA1671              0.030   hypothetical protein LOC85379 
LOC100289134          0.030   PREDICTED: hypothetical protein XP_002343933 
UBN2                  0.028   ubinuclein 2 
PACS2                 0.028   phosphofurin acidic cluster sorting protein 2 isofo...
LOC100289242          0.028   PREDICTED: hypothetical protein XP_002342243 
PRG4                  0.027   proteoglycan 4 isoform D 
PRG4                  0.027   proteoglycan 4 isoform C 
PRG4                  0.027   proteoglycan 4 isoform B 
PRG4                  0.027   proteoglycan 4 isoform A 
PACS2                 0.025   phosphofurin acidic cluster sorting protein 2 isofo...
LOC100133280          0.023   PREDICTED: similar to Putative POM121-like protein ...
LOC285679             0.023   hypothetical protein LOC285679 
KIAA1522              0.023   hypothetical protein LOC57648 
ANK2                  0.022   ankyrin 2 isoform 1 
LOC401180             0.020   PREDICTED: similar to hCG1745223 
LOC401180             0.020   PREDICTED: similar to hCG1745223 
LOC401180             0.020   PREDICTED: similar to hCG1745223 
LOC729815             0.020   PREDICTED: hypothetical protein 
TTBK2                 0.020   tau tubulin kinase 2 
ASH1L                 0.018   absent, small, or homeotic 1-like 
LOC100291634          0.018   PREDICTED: hypothetical protein XP_002346062 
LOC100287232          0.018   PREDICTED: hypothetical protein XP_002342816 
LOC100287232          0.018   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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