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Search of human proteins with 52487176
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52487176 tripartite motif-containing 37 protein [Homo
sapiens]
(964 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52487176 tripartite motif-containing 37 protein [Homo sapiens] 1937 0.0
gi|15147333 tripartite motif-containing 37 protein [Homo sapiens] 1937 0.0
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 78 3e-14
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 78 3e-14
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 75 4e-13
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 72 2e-12
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 72 2e-12
gi|22749269 ring finger protein 129 [Homo sapiens] 69 2e-11
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 68 4e-11
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 68 4e-11
gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 65 3e-10
gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 65 3e-10
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 64 5e-10
gi|56605981 tripartite motif-containing 72 [Homo sapiens] 64 7e-10
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 63 2e-09
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 63 2e-09
gi|117938316 tripartite motif-containing 22 [Homo sapiens] 62 3e-09
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 62 3e-09
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 62 3e-09
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 62 3e-09
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 62 3e-09
gi|37622899 ring finger protein 137 [Homo sapiens] 62 3e-09
gi|15208660 tripartite motif protein 21 [Homo sapiens] 61 4e-09
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 60 8e-09
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 60 8e-09
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 59 2e-08
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 59 2e-08
gi|5730009 ret finger protein [Homo sapiens] 57 8e-08
gi|20270353 tripartite motif-containing 43 [Homo sapiens] 56 2e-07
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 55 2e-07
>gi|52487176 tripartite motif-containing 37 protein [Homo sapiens]
Length = 964
Score = 1937 bits (5017), Expect = 0.0
Identities = 964/964 (100%), Positives = 964/964 (100%)
Query: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
Sbjct: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60
Query: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120
RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
Sbjct: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120
Query: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
Sbjct: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180
Query: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240
EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
Sbjct: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240
Query: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300
SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
Sbjct: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300
Query: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360
LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
Sbjct: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360
Query: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420
REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
Sbjct: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420
Query: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480
QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
Sbjct: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480
Query: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540
LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
Sbjct: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540
Query: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600
TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
Sbjct: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600
Query: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660
THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
Sbjct: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660
Query: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720
KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
Sbjct: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720
Query: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780
LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
Sbjct: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780
Query: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840
GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
Sbjct: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840
Query: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900
AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
Sbjct: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900
Query: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960
SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
Sbjct: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960
Query: 961 NSGR 964
NSGR
Sbjct: 961 NSGR 964
>gi|15147333 tripartite motif-containing 37 protein [Homo sapiens]
Length = 964
Score = 1937 bits (5017), Expect = 0.0
Identities = 964/964 (100%), Positives = 964/964 (100%)
Query: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
Sbjct: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60
Query: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120
RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
Sbjct: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120
Query: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
Sbjct: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180
Query: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240
EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
Sbjct: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240
Query: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300
SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
Sbjct: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300
Query: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360
LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
Sbjct: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360
Query: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420
REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
Sbjct: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420
Query: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480
QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
Sbjct: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480
Query: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540
LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
Sbjct: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540
Query: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600
TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
Sbjct: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600
Query: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660
THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
Sbjct: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660
Query: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720
KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
Sbjct: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720
Query: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780
LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
Sbjct: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780
Query: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840
GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
Sbjct: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840
Query: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900
AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
Sbjct: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900
Query: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960
SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
Sbjct: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960
Query: 961 NSGR 964
NSGR
Sbjct: 961 NSGR 964
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 78.2 bits (191), Expect = 3e-14
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT--EQRAQCPHCRAPLQLRE 62
++E++ C +C+E L++ + C C +CI RW E+ CP CR + R
Sbjct: 19 ALENLQVEASCSVCLEYLKEPVII-ECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRS 77
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
L R ++ ++ + K + ++ C HHE LS+FC+ ++ +C CA+
Sbjct: 78 L---RPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAI-SH 133
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREI 182
H HT PL + +++ K+ + + L ++L E+ E+ ++ + R ++I
Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQI 193
Query: 183 RNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEH 227
E + RLD + + L L +E ++L+ L + H
Sbjct: 194 LREFEELHRRLDEEQQVLLSRLE------EEEQDILQRLRENAAH 232
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 78.2 bits (191), Expect = 3e-14
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT--EQRAQCPHCRAPLQLRE 62
++E++ C +C+E L++ + C C +CI RW E+ CP CR + R
Sbjct: 19 ALENLQVEASCSVCLEYLKEPVII-ECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRS 77
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
L R ++ ++ + K + ++ C HHE LS+FC+ ++ +C CA+
Sbjct: 78 L---RPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAI-SH 133
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREI 182
H HT PL + +++ K+ + + L ++L E+ E+ ++ + R ++I
Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQI 193
Query: 183 RNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEH 227
E + RLD + + L L +E ++L+ L + H
Sbjct: 194 LREFEELHRRLDEEQQVLLSRLE------EEEQDILQRLRENAAH 232
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 74.7 bits (182), Expect = 4e-13
Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 23/268 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI-----RRWLTEQRAQCPHCRAPLQLRE 62
++ E C IC+E L L C C +C+ + L + + CP CR Q
Sbjct: 8 NVKEEVTCPICLELLTQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 66
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
+ R + ++L ++L E + D C H EKL +FC K IC C
Sbjct: 67 IRPNRHVANLVEKLREVKLSP----EGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN--------- 173
G HTF P E+ +++ K+ + LR++ E L ++ + +
Sbjct: 123 HRGHHTF-PTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181
Query: 174 -AKDERVREIRNAVEM-MIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
A E++R+I + E + L+ + ++ L +L +T + Q+T+ L L+ ++EH+L+
Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241
Query: 232 CSKSELISKSSEILMMFQQVHRKPMASF 259
S EL+ ++ + V K +F
Sbjct: 242 -SVMELLQGVDGVIKRTENVTLKKPETF 268
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 72.0 bits (175), Expect = 2e-12
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 23/268 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI-----RRWLTEQRAQCPHCRAPLQLRE 62
++ E C IC+E L L C C +C+ + L + + CP CR Q
Sbjct: 8 NVKEEVTCPICLELLTQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 66
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
+ R + ++L ++L E + D C H EKL +FC K IC C
Sbjct: 67 IRPNRHVANIVEKLREVKLSP----EGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN--------- 173
G HTF E+ +++ K+ + LR++ E L ++ + +
Sbjct: 123 HRGHHTFL-TEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181
Query: 174 -AKDERVREIRNAVEM-MIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
A E++R+I + E + L+ + ++ L +L +T + Q+T+ L L+ ++EH+L+
Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241
Query: 232 CSKSELISKSSEILMMFQQVHRKPMASF 259
S EL+ ++ + V K +F
Sbjct: 242 -SVMELLQGVDGVIKRTENVTLKKPETF 268
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 72.0 bits (175), Expect = 2e-12
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 23/268 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI-----RRWLTEQRAQCPHCRAPLQLRE 62
++ E C IC+E L L C C +C+ + L + + CP CR Q
Sbjct: 8 NVKEEVTCPICLELLTQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 66
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
+ R + ++L ++L E + D C H EKL +FC K IC C
Sbjct: 67 IRPNRHVANIVEKLREVKLSP----EGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN--------- 173
G HTF E+ +++ K+ + LR++ E L ++ + +
Sbjct: 123 HRGHHTFL-TEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181
Query: 174 -AKDERVREIRNAVEM-MIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
A E++R+I + E + L+ + ++ L +L +T + Q+T+ L L+ ++EH+L+
Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241
Query: 232 CSKSELISKSSEILMMFQQVHRKPMASF 259
S EL+ ++ + V K +F
Sbjct: 242 -SVMELLQGVDGVIKRTENVTLKKPETF 268
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 69.3 bits (168), Expect = 2e-11
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 20/292 (6%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIR-RWLT-EQRAQCPHCRAPLQLRELVN 65
++ E C IC+E L+D + +C C SC+ W + CP CR +
Sbjct: 9 NLQEESSCPICLEYLKDP-VTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYKSFRR 67
Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125
+T+ LQ+ + + E CE H++ L++FC + +C QC+ + H
Sbjct: 68 NPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCS-FSTKHQ 126
Query: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRRL--MELISLVQ-----EVERNVEAVR---NAK 175
H P+ + H + + LR + +E + ++Q E+++ VE R N++
Sbjct: 127 KHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKREEINSE 186
Query: 176 DERVR-EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSK 234
E++R ++N EM++ ++ + N L L L+ L+ LL+EVE + S
Sbjct: 187 FEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHLLREVEGKSVQ-SN 245
Query: 235 SELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENF 286
EL++++ + +Q + + SF T + L P Y +++ F
Sbjct: 246 LELLTQAKSMHHKYQNLKCPELFSFRLT----KYGFSLPPQYSGLDRIIKPF 293
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 68.2 bits (165), Expect = 4e-11
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 30/264 (11%)
Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71
C IC+E+ ++ ++ P C C C++ ++ CP CR L E
Sbjct: 23 CSICLERYKNPKVLP-CLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNF 81
Query: 72 -VTQQLDTLQLCSLTKHEEN------------EKDKCENHHEKLSVF-CWTCKKCICHQC 117
+T +D LQ + EE+ + C NH + F C +C+ +C +C
Sbjct: 82 FITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCREC 141
Query: 118 ALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDE 177
G H H PL ++ EQH + ++ + +RL E+ S +Q + + + N K
Sbjct: 142 T--EGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKAS 199
Query: 178 RVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV---EHQLRSCSK 234
V +I + + + L+ + K + LM + + + ++L+S L + + ++SCS
Sbjct: 200 IVDDIHSTFDELQKTLNVR---KSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSN 256
Query: 235 SELIS----KSSEILMMFQQVHRK 254
+ +E+L++ +Q+ K
Sbjct: 257 FTAQALNHGTETEVLLVKKQMSEK 280
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 68.2 bits (165), Expect = 4e-11
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 30/264 (11%)
Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71
C IC+E+ ++ ++ P C C C++ ++ CP CR L E
Sbjct: 50 CSICLERYKNPKVLP-CLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNF 108
Query: 72 -VTQQLDTLQLCSLTKHEEN------------EKDKCENHHEKLSVF-CWTCKKCICHQC 117
+T +D LQ + EE+ + C NH + F C +C+ +C +C
Sbjct: 109 FITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCREC 168
Query: 118 ALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDE 177
G H H PL ++ EQH + ++ + +RL E+ S +Q + + + N K
Sbjct: 169 T--EGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKAS 226
Query: 178 RVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV---EHQLRSCSK 234
V +I + + + L+ + K + LM + + + ++L+S L + + ++SCS
Sbjct: 227 IVDDIHSTFDELQKTLNVR---KSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSN 283
Query: 235 SELIS----KSSEILMMFQQVHRK 254
+ +E+L++ +Q+ K
Sbjct: 284 FTAQALNHGTETEVLLVKKQMSEK 307
>gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
Length = 550
Score = 65.1 bits (157), Expect = 3e-10
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 7 ESIAEVFRCFICMEKLRDAR-LCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 65
+S A +C +C + ++A +C C C C R +C R PL LV
Sbjct: 160 QSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPC--------RLRCHPPRGPLAKHRLVP 211
Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125
V+++L ++ + T HE ENH S++C CK +C+QC L G H
Sbjct: 212 PAQGR-VSRRLSPRKVSTCTDHE------LENH----SMYCVQCKMPVCYQC-LEEGKHS 259
Query: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRR-------LMELISLVQEVERN---VEAVRNAK 175
H K L +++ H +++++ + L R L++L ++VQ+++ N EA A+
Sbjct: 260 SHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQ 319
Query: 176 -DERVREIRNAVEMMIARLDTQLKNKLITLMGQ----KTSLTQETELLESLLQEVE 226
D + + ++AR++ + ++KL + Q L Q T L+E L+ ++
Sbjct: 320 CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIK 375
>gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens]
Length = 710
Score = 65.1 bits (157), Expect = 3e-10
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 7 ESIAEVFRCFICMEKLRDAR-LCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 65
+S A +C +C + ++A +C C C C R +C R PL LV
Sbjct: 160 QSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPC--------RLRCHPPRGPLAKHRLVP 211
Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125
V+++L ++ + T HE ENH S++C CK +C+QC L G H
Sbjct: 212 PAQGR-VSRRLSPRKVSTCTDHE------LENH----SMYCVQCKMPVCYQC-LEEGKHS 259
Query: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRR-------LMELISLVQEVERN---VEAVRNAK 175
H K L +++ H +++++ + L R L++L ++VQ+++ N EA A+
Sbjct: 260 SHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQ 319
Query: 176 -DERVREIRNAVEMMIARLDTQLKNKLITLMGQ----KTSLTQETELLESLLQEVE 226
D + + ++AR++ + ++KL + Q L Q T L+E L+ ++
Sbjct: 320 CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIK 375
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 64.3 bits (155), Expect = 5e-10
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 21/286 (7%)
Query: 14 RCFICMEKLRDARLCPHCSKLCCFSCIRR-WLTEQRA-QCPHCRAPLQLRELVNCRWAEE 71
+C IC++ L D + C C SCI++ WL Q CP CR Q +
Sbjct: 15 KCSICLDYLSDP-VTIECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQEGHFRSNTQLGR 73
Query: 72 VTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKP 131
+ + LQ K ++ E CE H++ LSVFC +C C H GH +P
Sbjct: 74 MIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCT-QPPDHQGHHVRP 132
Query: 132 LAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVE---- 187
+ + + + + L+++L +L L+ + +R + + +E+ + E
Sbjct: 133 IEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELREMVENQRQELSSEFEHLNQ 192
Query: 188 -------MMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240
+++RL + K+ L T+ + + L+S L +V +L S+ EL+S+
Sbjct: 193 FLDREQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVV-ELSELSELELLSQ 251
Query: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENF 286
+ +F + + S + + D S P Y + +++ F
Sbjct: 252 ----IKIFYESENESSPSIFSIHLKRDGCS-FPPQYSALQRIIKKF 292
>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
Length = 477
Score = 63.9 bits (154), Expect = 7e-10
Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQ----CPHCRAPLQLRELVNCRWAE 70
C +C++ L DA + C C +C+ R E A CP C+AP + + L
Sbjct: 14 CPLCLQ-LFDAPVTAECGHSFCRACLGRVAGEPAADGTVLCPCCQAPTRPQALST----- 67
Query: 71 EVTQQLDTLQLCSLTKH-EENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF 129
LQL L + + + CE H + LS++C + +C CA G H GH
Sbjct: 68 -------NLQLARLVEGLAQVPQGHCEEHLDPLSIYCEQDRALVCGVCASLGS-HRGHRL 119
Query: 130 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAV--- 186
P AE + + T++ ++ +L+ M V +E + V +E VR+ R AV
Sbjct: 120 LPAAEAHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEV----EETVRQFRGAVGEQ 175
Query: 187 ----EMMIARLDTQLKNKLITLMGQK-TSLTQETELLESLLQEVEHQLRSCSKSELISKS 241
+ +A L+ L + + G+ +L +E L S L+++ Q+ +
Sbjct: 176 LGKMRVFLAALEGSLDCEAERVRGEAGVALRRELGSLNSYLEQL-RQMEKVLEEVADKPQ 234
Query: 242 SEILMMFQQVHRKPMASFVTTPVP 265
+E LM + V + +P P
Sbjct: 235 TEFLMKYCLVTSRLQKILAESPPP 258
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 62.8 bits (151), Expect = 2e-09
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71
C IC+++ + ++ P C C C++ ++ Q CP CR L E
Sbjct: 22 CSICLDRYQCPKVLP-CLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNF 80
Query: 72 -VTQQLDTLQLCSLTKHEENEKD----------KCENHHEK-LSVFCWTCKKCICHQCAL 119
++ ++ +Q H+ + C NH K + +C C+ +C +C
Sbjct: 81 FISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECR- 139
Query: 120 WGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERV 179
G H H L ++ EQH + ++ +R RL +L + + V + ++ K E +
Sbjct: 140 -AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEAL 198
Query: 180 REIRNA---VEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSE 236
+I A +E + + L + L T+ G K + Q L++L Q EH SCS +E
Sbjct: 199 AQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQ--LDTLRQGQEHIGSSCSFAE 256
Query: 237 ---LISKSSEILMMFQQVHRKPMASFVTTPVP 265
+ + E+L++ + + R+ +A+ P
Sbjct: 257 QALRLGSAPEVLLVRKHM-RERLAALAAQAFP 287
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 62.8 bits (151), Expect = 2e-09
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71
C IC+++ + ++ P C C C++ ++ Q CP CR L E
Sbjct: 22 CSICLDRYQCPKVLP-CLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNF 80
Query: 72 -VTQQLDTLQLCSLTKHEENEKD----------KCENHHEK-LSVFCWTCKKCICHQCAL 119
++ ++ +Q H+ + C NH K + +C C+ +C +C
Sbjct: 81 FISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECR- 139
Query: 120 WGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERV 179
G H H L ++ EQH + ++ +R RL +L + + V + ++ K E +
Sbjct: 140 -AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEAL 198
Query: 180 REIRNA---VEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSE 236
+I A +E + + L + L T+ G K + Q L++L Q EH SCS +E
Sbjct: 199 AQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQ--LDTLRQGQEHIGSSCSFAE 256
Query: 237 ---LISKSSEILMMFQQVHRKPMASFVTTPVP 265
+ + E+L++ + + R+ +A+ P
Sbjct: 257 QALRLGSAPEVLLVRKHM-RERLAALAAQAFP 287
>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 62.0 bits (149), Expect = 3e-09
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ------RAQCPHC 54
MD I + C IC+E L + L C C +CI + E + CP C
Sbjct: 1 MDFSVKVDIEKEVTCPICLELLTEP-LSLDCGHSFCQACITAKIKESVIISRGESSCPVC 59
Query: 55 RAPLQLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCIC 114
+ Q L R + +++ +++ + E ++D CE+H +KL +FC K IC
Sbjct: 60 QTRFQPGNLRPNRHLANIVERVKEVKM---SPQEGQKRDVCEHHGKKLQIFCKEDGKVIC 116
Query: 115 HQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN- 173
C L H GH + E+ ++ K+ + +L + E L ++ + A +N
Sbjct: 117 WVCEL-SQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNY 175
Query: 174 AKDERVREIRNAVEMMI----------ARLDTQLKNKLITLMGQKTSLTQETELLESLLQ 223
+ ER + ++ EM + +L+ N L L L Q+ + +L+
Sbjct: 176 IQIERQKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQDASTLIS 235
Query: 224 EVEHQLRSCS 233
+++ +LR S
Sbjct: 236 DLQRRLRGSS 245
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 62.0 bits (149), Expect = 3e-09
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61
++ E C IC+E L + L C C +CI + +T ++ CP C
Sbjct: 8 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66
Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121
L + + ++L ++L + ++D C++H EKL +FC +K IC C
Sbjct: 67 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 123
Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171
G HT FK E + + + K EE KL + E S +V+ + +
Sbjct: 124 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 183
Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
+ D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE +
Sbjct: 184 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 242
Query: 232 CSKSELISKSSEIL 245
S EL+ S I+
Sbjct: 243 WSTMELLQDMSGIM 256
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 62.0 bits (149), Expect = 3e-09
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61
++ E C IC+E L + L C C +CI + +T ++ CP C
Sbjct: 8 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66
Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121
L + + ++L ++L + ++D C++H EKL +FC +K IC C
Sbjct: 67 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 123
Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171
G HT FK E + + + K EE KL + E S +V+ + +
Sbjct: 124 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 183
Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
+ D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE +
Sbjct: 184 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 242
Query: 232 CSKSELISKSSEIL 245
S EL+ S I+
Sbjct: 243 WSTMELLQDMSGIM 256
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 62.0 bits (149), Expect = 3e-09
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61
++ E C IC+E L + L C C +CI + +T ++ CP C
Sbjct: 8 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66
Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121
L + + ++L ++L + ++D C++H EKL +FC +K IC C
Sbjct: 67 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 123
Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171
G HT FK E + + + K EE KL + E S +V+ + +
Sbjct: 124 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 183
Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
+ D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE +
Sbjct: 184 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 242
Query: 232 CSKSELISKSSEIL 245
S EL+ S I+
Sbjct: 243 WSTMELLQDMSGIM 256
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 62.0 bits (149), Expect = 3e-09
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%)
Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61
++ E C IC+E L + L C C +CI + +T ++ CP C
Sbjct: 362 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 420
Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121
L + + ++L ++L + ++D C++H EKL +FC +K IC C
Sbjct: 421 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 477
Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171
G HT FK E + + + K EE KL + E S +V+ + +
Sbjct: 478 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 537
Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
+ D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE +
Sbjct: 538 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 596
Query: 232 CSKSELISKSSEIL 245
S EL+ S I+
Sbjct: 597 WSTMELLQDMSGIM 610
Score = 60.5 bits (145), Expect = 8e-09
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 23/253 (9%)
Query: 9 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQRAQ--CPHCRAPLQLRE 62
I E C IC+E L + L C C +CI R + Q + CP C+ Q
Sbjct: 37 IREEVTCPICLELLTEP-LSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 95
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
L R + ++L + L ++ + C +H EKL +FC K IC C
Sbjct: 96 LRPNRHLANIVRRLREVVL---GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQE 152
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD-ERVR- 180
G HTF + E+ +++ K E + KL+ E L + + +N + ER R
Sbjct: 153 HRGHHTFL-VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 211
Query: 181 -----EIRNAVEMM----IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
++RN ++ + + +L+ + K L + + L +T+ L L+ ++E + +
Sbjct: 212 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 271
Query: 232 CSKSELISKSSEI 244
S EL+ S++
Sbjct: 272 -STMELLQDVSDV 283
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 61.6 bits (148), Expect = 3e-09
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 34/251 (13%)
Query: 6 VESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRR-WLTEQRAQ-----CPHCRAPLQ 59
VE+I E C ICM LR+ + C C SC+ W +Q CP CRAP+Q
Sbjct: 7 VEAIVEEVACPICMTFLREP-MSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQ 65
Query: 60 LRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCAL 119
R L W ++ ++ ++L L + D CE H EKL +FC +C C+
Sbjct: 66 PRNL-RPNW--QLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACS- 121
Query: 120 WGGMHGGHTFKPLA--------EIYE--QHVTKVNEEVAKL----RRRL--------MEL 157
H H+ P+ E++E +H+ K EE KL R+R
Sbjct: 122 QSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRK 181
Query: 158 ISLVQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETEL 217
S+V E E+ + + K R++ V +A L + + L + L Q++++
Sbjct: 182 QSIVWEFEK-YQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELIQQSQV 240
Query: 218 LESLLQEVEHQ 228
L ++ E++ +
Sbjct: 241 LWRMIAELKER 251
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 61.2 bits (147), Expect = 4e-09
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 19/238 (7%)
Query: 11 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAE 70
E C IC++ + + C C CI + + CP CR L+ N R
Sbjct: 12 EEVTCPICLDPFVEP-VSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLK---NLRPNR 67
Query: 71 EVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFK 130
++ ++ L+ S E + ++C H E+L +FC K +C CA H H
Sbjct: 68 QLANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVCA-QSRKHRDHAMV 126
Query: 131 PLAEIYEQHVTKVNEEVAKLRRR--LMELISLVQEVER-----NVEAVRNAKDERVREIR 183
PL E +++ K+ + +LRR+ L E + + ++R VE ++ + +
Sbjct: 127 PLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQKSRIHAEFVQQK 186
Query: 184 NAV----EMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSEL 237
N + + + L+ + +L L ++ L Q+++ L+ L+ E++ R C S L
Sbjct: 187 NFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELD---RRCHSSAL 241
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 60.5 bits (145), Expect = 8e-09
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 23/253 (9%)
Query: 9 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQRAQ--CPHCRAPLQLRE 62
I E C IC+E L + L C C +CI R + Q + CP C+ Q
Sbjct: 9 IREEVTCPICLELLTEP-LSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 67
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
L R + ++L + L ++ + C +H EKL +FC K IC C
Sbjct: 68 LRPNRHLANIVRRLREVVL---GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQE 124
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD-ERVR- 180
G HTF + E+ +++ K E + KL+ E L + + +N + ER R
Sbjct: 125 HRGHHTFL-VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 183
Query: 181 -----EIRNAVEMM----IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
++RN ++ + + +L+ + K L + + L +T+ L L+ ++E + +
Sbjct: 184 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 243
Query: 232 CSKSELISKSSEI 244
S EL+ S++
Sbjct: 244 -STMELLQDVSDV 255
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 60.5 bits (145), Expect = 8e-09
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 23/253 (9%)
Query: 9 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQRAQ--CPHCRAPLQLRE 62
I E C IC+E L + L C C +CI R + Q + CP C+ Q
Sbjct: 37 IREEVTCPICLELLTEP-LSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 95
Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122
L R + ++L + L ++ + C +H EKL +FC K IC C
Sbjct: 96 LRPNRHLANIVRRLREVVL---GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQE 152
Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD-ERVR- 180
G HTF + E+ +++ K E + KL+ E L + + +N + ER R
Sbjct: 153 HRGHHTFL-VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 211
Query: 181 -----EIRNAVEMM----IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231
++RN ++ + + +L+ + K L + + L +T+ L L+ ++E + +
Sbjct: 212 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 271
Query: 232 CSKSELISKSSEI 244
S EL+ S++
Sbjct: 272 -STMELLQDVSDV 283
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 58.9 bits (141), Expect = 2e-08
Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 21/270 (7%)
Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT------EQRAQCPHCRAPL 58
SV S+A+ C IC LR+ + C C +C+ R+ E+ CP C+ P
Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPF 64
Query: 59 QLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCA 118
+ V + ++ LQL S E+D C+ H EK+ FC + +C C
Sbjct: 65 RPGSFRPNWQLANVVENIERLQLVSTLGL--GEEDVCQEHGEKIYFFCEDDEMQLCVVCR 122
Query: 119 LWGGMHGGHTFKPL---AEIYEQHVTKVNEEVAKLRRRLMELIS----LVQEVERNVEAV 171
G H HT + L A Y + + K + + K R + E+ S +Q + V
Sbjct: 123 -EAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTK 181
Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTS----LTQETELLESLLQEVEH 227
R +R +E + L QL+++ ++ Q+ + E +L++E+E
Sbjct: 182 RQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEE 241
Query: 228 QLRSCSKSELISKSSEILMMFQQVHRKPMA 257
+ ++ L S ++ + RKP+A
Sbjct: 242 KNERPARELLTDIRSTLIRCETRKCRKPVA 271
>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
sapiens]
Length = 395
Score = 58.9 bits (141), Expect = 2e-08
Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 21/270 (7%)
Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT------EQRAQCPHCRAPL 58
SV S+A+ C IC LR+ + C C +C+ R+ E+ CP C+ P
Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPF 64
Query: 59 QLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCA 118
+ V + ++ LQL S E+D C+ H EK+ FC + +C C
Sbjct: 65 RPGSFRPNWQLANVVENIERLQLVSTLGL--GEEDVCQEHGEKIYFFCEDDEMQLCVVCR 122
Query: 119 LWGGMHGGHTFKPL---AEIYEQHVTKVNEEVAKLRRRLMELIS----LVQEVERNVEAV 171
G H HT + L A Y + + K + + K R + E+ S +Q + V
Sbjct: 123 -EAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTK 181
Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTS----LTQETELLESLLQEVEH 227
R +R +E + L QL+++ ++ Q+ + E +L++E+E
Sbjct: 182 RQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEE 241
Query: 228 QLRSCSKSELISKSSEILMMFQQVHRKPMA 257
+ ++ L S ++ + RKP+A
Sbjct: 242 KNERPARELLTDIRSTLIRCETRKCRKPVA 271
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 57.0 bits (136), Expect = 8e-08
Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 30/303 (9%)
Query: 7 ESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT-EQRAQCPHCRAPLQLRELVN 65
E + + C +C++ + + +CC R W T E CP CR R +
Sbjct: 8 ECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRP 67
Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125
R VTQ + L+ E CE H E L ++C + IC C H
Sbjct: 68 NRHLANVTQLVKQLRT-ERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR-SREHR 125
Query: 126 GHTFKPLAEIYE----------QHVTKVNEEVAKLRRRLM------ELISLVQEVERNVE 169
GH+ PL E E H+ +V + K RRR EL+SL Q +ER E
Sbjct: 126 GHSVLPLEEAVEGFKEQIQNQLDHLKRVKD--LKKRRRAQGEQARAELLSLTQ-MER--E 180
Query: 170 AVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQL 229
+ ++ ++ ++ARL+ ++ G T + L SL+ ++E +
Sbjct: 181 KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ 240
Query: 230 RSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTL 289
+ ++ EL+ + L +++ R P ++T PPD ++ F+ E+
Sbjct: 241 QQPTR-ELLQDIGDTLSRAERI-RIP-EPWIT---PPDLQEKIHIFAQKCLFLTESLKQF 294
Query: 290 RQR 292
++
Sbjct: 295 TEK 297
>gi|20270353 tripartite motif-containing 43 [Homo sapiens]
Length = 446
Score = 55.8 bits (133), Expect = 2e-07
Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 32/287 (11%)
Query: 1 MDEQSVESIAEVFRCFICMEKLRD-ARLCPHCSKLCCFSCI-RRWLTEQR-AQCPHCRAP 57
MD + + C IC+ L D +C C C C+ W Q A CP CR P
Sbjct: 1 MDSDFSHAFQKELTCVICLNYLVDPVTIC--CGHSFCRPCLCLSWEEAQSPANCPACREP 58
Query: 58 LQLRELVNCRWAEEVTQQLDTL-QLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQ 116
+ + + L T+ + SL + +EK C H + +FC K +C
Sbjct: 59 SPKMDFKT----NILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLL 114
Query: 117 CALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD 176
C+ HG H P+ E E+H K+ +++ L +++ E + E R R
Sbjct: 115 CSN-SQEHGAHKHHPIEEAAEEHREKLLKQMRILWKKIQENQRNLYEEGRTAFLWRGNVV 173
Query: 177 ERVREIRNAVEMM-----------IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV 225
R + IRN + + RL+ + + L + Q+++ L+ + QE+
Sbjct: 174 LRAQMIRNEYRKLHPVLHKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQEL 233
Query: 226 EHQLRSCSKS--ELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTS 270
+ C K EL+ +I+ + V + PV P+ T+
Sbjct: 234 ---MEMCHKPDVELLQDLGDIVARSESV-----LLHMPQPVNPELTA 272
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 55.5 bits (132), Expect = 2e-07
Identities = 53/255 (20%), Positives = 111/255 (43%), Gaps = 28/255 (10%)
Query: 2 DEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRR--------W--------LT 45
D +E++ + C IC+E + C C C W ++
Sbjct: 10 DGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMS 69
Query: 46 EQRAQCPHCRAPLQL-RELVNCRWAEEVTQQLDTL--QLCSLTKHEENEKDKCENHH-EK 101
R +CP CR + + R V + + + + Q CS ++ C+ H EK
Sbjct: 70 GGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEK 129
Query: 102 LSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLV 161
++++C TC+ C C ++ G+H PL +++ T++N ++ L + +++
Sbjct: 130 INIYCLTCEVPTCSMCKVF-GIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTII 188
Query: 162 QEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETEL--LE 219
++E + + + E+ + + A LD + K++L+ Q+ + QE +L +E
Sbjct: 189 TQLEDSRRVTKENSHQVKEELSQKFDTLYAILD-EKKSELL----QRITQEQEKKLSFIE 243
Query: 220 SLLQEVEHQLRSCSK 234
+L+Q+ + QL +K
Sbjct: 244 ALIQQYQEQLDKSTK 258
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,639,415
Number of Sequences: 37866
Number of extensions: 1774348
Number of successful extensions: 9891
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 475
Number of HSP's that attempted gapping in prelim test: 8470
Number of HSP's gapped (non-prelim): 1553
length of query: 964
length of database: 18,247,518
effective HSP length: 112
effective length of query: 852
effective length of database: 14,006,526
effective search space: 11933560152
effective search space used: 11933560152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.