Guide to the Human Genome
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Name: ADAMTSL5 Sequence: fasta or formatted (471aa) NCBI GI: 226442878
Description:

ADAMTS-like 5

Referenced in:

Metalloproteases
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         41           2
 C cysteine            4.9         23           1
 D aspartate           4.2         20           1
 E glutamate           4.0         19           2
 F phenylalanine       3.2         15           1
 G glycine             9.8         46           2
 H histidine           4.0         19           3
 I isoleucine          1.1          5           1
 K lysine              0.4          2           1
 L leucine            10.6         50           3
 M methionine          0.8          4           1
 N asparagine          2.3         11           1
 P proline            10.2         48           2
 Q glutamine           5.5         26           1
 R arginine            9.1         43           2
 S serine              4.9         23           3
 T threonine           4.0         19           1
 V valine              6.4         30           2
 W tryptophan          2.5         12           1
 Y tyrosine            3.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAMTS-like 5 
ADAMTS6               0.185   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL4              0.184   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.184   thrombospondin repeat containing 1 isoform 2 
ADAMTS16              0.181   ADAM metallopeptidase with thrombospondin type 1 mo...
PAPLN                 0.173   papilin 
ADAMTS18              0.166   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.160   ADAM metallopeptidase with thrombospondin type 1 mot...
THSD4                 0.159   thrombospondin, type I, domain containing 4 
ADAMTS7               0.157   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL2              0.146   ADAMTS-like 2 precursor 
ADAMTSL2              0.146   ADAMTS-like 2 precursor 
ADAMTS4               0.144   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.140   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS15              0.134   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS5               0.134   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS1               0.132   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.130   a disintegrin-like and metalloprotease with thrombo...
ADAMTS8               0.127   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS17              0.118   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.118   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL1              0.113   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.113   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL3              0.112   ADAMTS-like 3 precursor 
ADAMTS2               0.107   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.100   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.094   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.094   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.090   ADAM metallopeptidase with thrombospondin type 1 mot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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