Guide to the Human Genome
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Name: OR5T2 Sequence: fasta or formatted (359aa) NCBI GI: 52317142
Description:

olfactory receptor, family 5, subfamily T, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         18           2
 C cysteine            2.5          9           1
 D aspartate           3.3         12           1
 E glutamate           1.7          6           1
 F phenylalanine       7.8         28           3
 G glycine             4.2         15           1
 H histidine           3.1         11           1
 I isoleucine          8.4         30           1
 K lysine              4.7         17           2
 L leucine            12.0         43           3
 M methionine          4.5         16           1
 N asparagine          5.0         18           1
 P proline             3.1         11           2
 Q glutamine           1.4          5           1
 R arginine            2.5          9           2
 S serine              9.2         33           3
 T threonine           6.1         22           2
 V valine              9.2         33           2
 W tryptophan          0.0          0           0
 Y tyrosine            6.4         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily T, member 2 ... 
OR5T1                 0.671   olfactory receptor, family 5, subfamily T, member 1 ...
OR5T3                 0.656   olfactory receptor, family 5, subfamily T, member 3 ...
OR5AR1                0.459   olfactory receptor, family 5, subfamily AR, member 1...
OR5AP2                0.456   olfactory receptor, family 5, subfamily AP, member 2...
OR5W2                 0.440   olfactory receptor, family 5, subfamily W, member 2 ...
OR8U9                 0.437   olfactory receptor, family 8, subfamily U, member 9 ...
OR5I1                 0.431   olfactory receptor, family 5, subfamily I, member 1 [...
OR5B12                0.430   olfactory receptor, family 5, subfamily B, member 12...
OR5B21                0.430   olfactory receptor, family 5, subfamily B, member 21...
OR8U1                 0.425   olfactory receptor, family 8, subfamily U, member 1 ...
OR5A2                 0.424   olfactory receptor, family 5, subfamily A, member 2 ...
OR8U8                 0.424   olfactory receptor, family 8, subfamily U, member 8 ...
OR5C1                 0.420   olfactory receptor, family 5, subfamily C, member 1 ...
OR5B3                 0.420   olfactory receptor, family 5, subfamily B, member 3 ...
OR5H2                 0.418   olfactory receptor, family 5, subfamily H, member 2 ...
OR9I1                 0.414   olfactory receptor, family 9, subfamily I, member 1 ...
OR5R1                 0.414   olfactory receptor, family 5, subfamily R, member 1 ...
OR5AU1                0.414   olfactory receptor, family 5, subfamily AU, member 1...
OR5A1                 0.412   olfactory receptor, family 5, subfamily A, member 1 ...
OR5L1                 0.412   olfactory receptor, family 5, subfamily L, member 1 ...
OR5D18                0.408   olfactory receptor, family 5, subfamily D, member 18...
OR5J2                 0.407   olfactory receptor, family 5, subfamily J, member 2 ...
OR5F1                 0.405   olfactory receptor, family 5, subfamily F, member 1 ...
OR5L2                 0.405   olfactory receptor, family 5, subfamily L, member 2 ...
OR5AS1                0.405   olfactory receptor, family 5, subfamily AS, member 1...
OR9G4                 0.404   olfactory receptor, family 9, subfamily G, member 4 ...
OR5AC2                0.404   olfactory receptor, family 5, subfamily AC, member 2...
OR5D16                0.402   olfactory receptor, family 5, subfamily D, member 16...
OR5H14                0.402   olfactory receptor, family 5, subfamily H, member 14...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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