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Search of human proteins with 5174511
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174511 Sma- and Mad-related protein 2 isoform 1 [Homo
sapiens]
(467 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51173730 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens] 983 0.0
gi|5174511 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens] 983 0.0
gi|209693426 Sma- and Mad-related protein 2 isoform 2 [Homo sapi... 903 0.0
gi|5174513 mothers against decapentaplegic homolog 3 isoform 1 [... 809 0.0
gi|223029442 mothers against decapentaplegic homolog 3 isoform 3... 700 0.0
gi|223029440 mothers against decapentaplegic homolog 3 isoform 2... 619 e-177
gi|47778931 SMAD, mothers against DPP homolog 5 [Homo sapiens] 544 e-155
gi|47778929 SMAD, mothers against DPP homolog 5 [Homo sapiens] 544 e-155
gi|47778925 SMAD, mothers against DPP homolog 5 [Homo sapiens] 544 e-155
gi|5174519 SMAD family member 9 isoform b [Homo sapiens] 538 e-153
gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens] 536 e-152
gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens] 536 e-152
gi|187828357 SMAD family member 9 isoform a [Homo sapiens] 526 e-149
gi|223029444 mothers against decapentaplegic homolog 3 isoform 4... 449 e-126
gi|4885457 mothers against decapentaplegic homolog 4 [Homo sapiens] 168 8e-42
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 131 1e-30
gi|5174517 SMAD family member 7 [Homo sapiens] 124 2e-28
gi|218749837 SMAD family member 6 isoform 2 [Homo sapiens] 105 1e-22
gi|11276067 snail 2 [Homo sapiens] 35 0.15
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.19
gi|113865921 hypothetical protein LOC441457 [Homo sapiens] 34 0.25
gi|33946327 nucleoporin 214kDa [Homo sapiens] 33 0.42
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 33 0.42
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 33 0.42
gi|46094081 development and differentiation enhancing factor 1 [... 33 0.55
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 33 0.72
gi|71274109 nuclear factor of kappa light polypeptide gene enhan... 32 1.2
gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens] 32 1.2
gi|70980547 FYVE-finger-containing Rab5 effector protein rabenos... 32 1.6
gi|34452173 integrin alpha X precursor [Homo sapiens] 31 2.7
>gi|51173730 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens]
Length = 467
Score = 983 bits (2541), Expect = 0.0
Identities = 467/467 (100%), Positives = 467/467 (100%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR
Sbjct: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
Query: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV
Sbjct: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
Query: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS
Sbjct: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
Query: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD
Sbjct: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
Query: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
Sbjct: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
Query: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
Sbjct: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
Query: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS
Sbjct: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>gi|5174511 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens]
Length = 467
Score = 983 bits (2541), Expect = 0.0
Identities = 467/467 (100%), Positives = 467/467 (100%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR
Sbjct: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
Query: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV
Sbjct: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
Query: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS
Sbjct: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
Query: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD
Sbjct: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
Query: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
Sbjct: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
Query: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
Sbjct: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
Query: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS
Sbjct: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>gi|209693426 Sma- and Mad-related protein 2 isoform 2 [Homo
sapiens]
Length = 437
Score = 903 bits (2333), Expect = 0.0
Identities = 437/467 (93%), Positives = 437/467 (93%), Gaps = 30/467 (6%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
LEKAITTQNCNTKCVTIP RSLDGRLQVSHR
Sbjct: 61 LEKAITTQNCNTKCVTIP------------------------------RSLDGRLQVSHR 90
Query: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV
Sbjct: 91 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 150
Query: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS
Sbjct: 151 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 210
Query: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD
Sbjct: 211 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 270
Query: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
Sbjct: 271 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 330
Query: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
Sbjct: 331 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 390
Query: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS
Sbjct: 391 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 437
>gi|5174513 mothers against decapentaplegic homolog 3 isoform 1
[Homo sapiens]
Length = 425
Score = 809 bits (2089), Expect = 0.0
Identities = 392/467 (83%), Positives = 411/467 (88%), Gaps = 42/467 (8%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
MSSILPFTPP+VKRLLGWKK GEQNGQEEKWCEKAVKSLVKKLKKTG+LDE
Sbjct: 1 MSSILPFTPPIVKRLLGWKK----------GEQNGQEEKWCEKAVKSLVKKLKKTGQLDE 50
Query: 61 LEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHR 120
LEKAITTQN NTKC+TIP RSLDGRLQVSHR
Sbjct: 51 LEKAITTQNVNTKCITIP------------------------------RSLDGRLQVSHR 80
Query: 121 KGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLV 180
KGLPHVIYCRLWRWPDLHSHHEL+A+E CE+AFN+KKDEVCVNPYHYQRVETPVLPPVLV
Sbjct: 81 KGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLV 140
Query: 181 PRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQS 240
PRHTEI E PPLDDY+HSIPENTNFPAGIEPQSN IPETPPPGY+SEDGETSD Q+N S
Sbjct: 141 PRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSN-IPETPPPGYLSEDGETSDHQMNHS 199
Query: 241 MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVD 300
MD GSP LSP +SP +++LDLQPVTY EPAFWCSI+YYELNQRVGETFHASQPS+TVD
Sbjct: 200 MDAGSP-NLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVD 258
Query: 301 GFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 360
GFTDPSNSERFCLGLLSNVNRNA VE+TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP
Sbjct: 259 GFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSP 318
Query: 361 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 420
NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK
Sbjct: 319 NCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVK 378
Query: 421 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPS+RCSS+S
Sbjct: 379 GWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
>gi|223029442 mothers against decapentaplegic homolog 3 isoform 3
[Homo sapiens]
Length = 381
Score = 700 bits (1806), Expect = 0.0
Identities = 328/359 (91%), Positives = 344/359 (95%), Gaps = 2/359 (0%)
Query: 109 RSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQ 168
RSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHEL+A+E CE+AFN+KKDEVCVNPYHYQ
Sbjct: 25 RSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEVCVNPYHYQ 84
Query: 169 RVETPVLPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISE 228
RVETPVLPPVLVPRHTEI E PPLDDY+HSIPENTNFPAGIEPQSN IPETPPPGY+SE
Sbjct: 85 RVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTNFPAGIEPQSN-IPETPPPGYLSE 143
Query: 229 DGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGE 288
DGETSD Q+N SMD GSP LSP +SP +++LDLQPVTY EPAFWCSI+YYELNQRVGE
Sbjct: 144 DGETSDHQMNHSMDAGSP-NLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGE 202
Query: 289 TFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAE 348
TFHASQPS+TVDGFTDPSNSERFCLGLLSNVNRNA VE+TRRHIGRGVRLYYIGGEVFAE
Sbjct: 203 TFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAE 262
Query: 349 CLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQL 408
CLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQL
Sbjct: 263 CLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQL 322
Query: 409 TRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
TRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPS+RCSS+S
Sbjct: 323 TRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 381
>gi|223029440 mothers against decapentaplegic homolog 3 isoform 2
[Homo sapiens]
Length = 320
Score = 619 bits (1596), Expect = e-177
Identities = 292/322 (90%), Positives = 307/322 (95%), Gaps = 2/322 (0%)
Query: 146 IENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTHSIPENTN 205
+E CE+AFN+KKDEVCVNPYHYQRVETPVLPPVLVPRHTEI E PPLDDY+HSIPENTN
Sbjct: 1 MELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSIPENTN 60
Query: 206 FPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQP 265
FPAGIEPQSN IPETPPPGY+SEDGETSD Q+N SMD GSP LSP +SP +++LDLQP
Sbjct: 61 FPAGIEPQSN-IPETPPPGYLSEDGETSDHQMNHSMDAGSP-NLSPNPMSPAHNNLDLQP 118
Query: 266 VTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATV 325
VTY EPAFWCSI+YYELNQRVGETFHASQPS+TVDGFTDPSNSERFCLGLLSNVNRNA V
Sbjct: 119 VTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAV 178
Query: 326 EMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIF 385
E+TRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIF
Sbjct: 179 ELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIF 238
Query: 386 NNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGP 445
NNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGP
Sbjct: 239 NNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGP 298
Query: 446 LQWLDKVLTQMGSPSVRCSSMS 467
LQWLDKVLTQMGSPS+RCSS+S
Sbjct: 299 LQWLDKVLTQMGSPSIRCSSVS 320
>gi|47778931 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 544 bits (1401), Expect = e-155
Identities = 287/509 (56%), Positives = 337/509 (66%), Gaps = 89/509 (17%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
M+S+ FT P VKRLLGWK Q +EEKW EKAV +LVKKLKK G ++
Sbjct: 4 MASLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDALVKKLKKKKGAME 50
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELEKA+++ +KCVTIP RSLDGRLQVSH
Sbjct: 51 ELEKALSSPGQPSKCVTIP------------------------------RSLDGRLQVSH 80
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK ++ CE+ F K+ EVC+NPYHY+RVE+PVLPPVL
Sbjct: 81 RKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVESPVLPPVL 140
Query: 180 VPRHTE------ILTELPPLDDYTHSIPENTNFPAG----------IEPQSNYIP----- 218
VPRH E +L + L +P+N FP + P S Y P
Sbjct: 141 VPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQPNNTPFPLSPNSPYPPSPASS 200
Query: 219 -------------------ETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNH 259
+TPPP Y+ D + Q +Q MDT + + P + ++
Sbjct: 201 TYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMG-QDNSQPMDTSN--NMIPQIMPSIS- 256
Query: 260 SLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSE-RFCLGLLSN 318
S D+QPV Y EP WCSI YYELN RVGE FHAS S+ VDGFTDPSN++ RFCLGLLSN
Sbjct: 257 SRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKSRFCLGLLSN 316
Query: 319 VNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPP 378
VNRN+T+E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS NCN +G+HP TVCKIP
Sbjct: 317 VNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPS 376
Query: 379 GCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWI 438
C+LKIFNNQEFA LLAQSVN GFEAVY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWI
Sbjct: 377 SCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWI 436
Query: 439 ELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
E+HL+GPLQWLDKVLTQMGSP SS+S
Sbjct: 437 EIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>gi|47778929 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 544 bits (1401), Expect = e-155
Identities = 287/509 (56%), Positives = 337/509 (66%), Gaps = 89/509 (17%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
M+S+ FT P VKRLLGWK Q +EEKW EKAV +LVKKLKK G ++
Sbjct: 4 MASLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDALVKKLKKKKGAME 50
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELEKA+++ +KCVTIP RSLDGRLQVSH
Sbjct: 51 ELEKALSSPGQPSKCVTIP------------------------------RSLDGRLQVSH 80
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK ++ CE+ F K+ EVC+NPYHY+RVE+PVLPPVL
Sbjct: 81 RKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVESPVLPPVL 140
Query: 180 VPRHTE------ILTELPPLDDYTHSIPENTNFPAG----------IEPQSNYIP----- 218
VPRH E +L + L +P+N FP + P S Y P
Sbjct: 141 VPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQPNNTPFPLSPNSPYPPSPASS 200
Query: 219 -------------------ETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNH 259
+TPPP Y+ D + Q +Q MDT + + P + ++
Sbjct: 201 TYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMG-QDNSQPMDTSN--NMIPQIMPSIS- 256
Query: 260 SLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSE-RFCLGLLSN 318
S D+QPV Y EP WCSI YYELN RVGE FHAS S+ VDGFTDPSN++ RFCLGLLSN
Sbjct: 257 SRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKSRFCLGLLSN 316
Query: 319 VNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPP 378
VNRN+T+E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS NCN +G+HP TVCKIP
Sbjct: 317 VNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPS 376
Query: 379 GCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWI 438
C+LKIFNNQEFA LLAQSVN GFEAVY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWI
Sbjct: 377 SCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWI 436
Query: 439 ELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
E+HL+GPLQWLDKVLTQMGSP SS+S
Sbjct: 437 EIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>gi|47778925 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 544 bits (1401), Expect = e-155
Identities = 287/509 (56%), Positives = 337/509 (66%), Gaps = 89/509 (17%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
M+S+ FT P VKRLLGWK Q +EEKW EKAV +LVKKLKK G ++
Sbjct: 4 MASLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDALVKKLKKKKGAME 50
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELEKA+++ +KCVTIP RSLDGRLQVSH
Sbjct: 51 ELEKALSSPGQPSKCVTIP------------------------------RSLDGRLQVSH 80
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK ++ CE+ F K+ EVC+NPYHY+RVE+PVLPPVL
Sbjct: 81 RKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVESPVLPPVL 140
Query: 180 VPRHTE------ILTELPPLDDYTHSIPENTNFPAG----------IEPQSNYIP----- 218
VPRH E +L + L +P+N FP + P S Y P
Sbjct: 141 VPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQPNNTPFPLSPNSPYPPSPASS 200
Query: 219 -------------------ETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNH 259
+TPPP Y+ D + Q +Q MDT + + P + ++
Sbjct: 201 TYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMG-QDNSQPMDTSN--NMIPQIMPSIS- 256
Query: 260 SLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSE-RFCLGLLSN 318
S D+QPV Y EP WCSI YYELN RVGE FHAS S+ VDGFTDPSN++ RFCLGLLSN
Sbjct: 257 SRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKSRFCLGLLSN 316
Query: 319 VNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPP 378
VNRN+T+E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS NCN +G+HP TVCKIP
Sbjct: 317 VNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPS 376
Query: 379 GCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWI 438
C+LKIFNNQEFA LLAQSVN GFEAVY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWI
Sbjct: 377 SCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWI 436
Query: 439 ELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
E+HL+GPLQWLDKVLTQMGSP SS+S
Sbjct: 437 EIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>gi|5174519 SMAD family member 9 isoform b [Homo sapiens]
Length = 430
Score = 538 bits (1386), Expect = e-153
Identities = 281/477 (58%), Positives = 330/477 (69%), Gaps = 63/477 (13%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
+SS+ FT P VKRLLGWK Q +EEKW EKAV SLVKKLKK G +D
Sbjct: 7 ISSLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDSLVKKLKKKKGAMD 53
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELE+A++ +KCVTIP RSLDGRLQVSH
Sbjct: 54 ELERALSCPGQPSKCVTIP------------------------------RSLDGRLQVSH 83
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK +E CE+ F K+ EVC+NPYHY+RVETPVLPPVL
Sbjct: 84 RKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYRRVETPVLPPVL 143
Query: 180 VPRHTEILTELPPLDDYT----HS---IPENTNFPAGIE-PQSNYIPETPPPGYISEDGE 231
VPRH+E +L L + HS +P N +P + P + +P +P +
Sbjct: 144 VPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAF-----S 198
Query: 232 TSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFH 291
S + GSP+E SP HS D +PV Y EP WCS+AYYELN RVGETF
Sbjct: 199 QSPCTASYPHSPGSPSEPE----SPYQHS-DFRPVCYEEPQHWCSVAYYELNNRVGETFQ 253
Query: 292 ASQPSLTVDGFTDPSNSE-RFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECL 350
AS S+ +DGFTDPSN+ RFCLGLLSNVNRN+T+E TRRHIG+GV LYY+GGEV+AEC+
Sbjct: 254 ASSRSVLIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECV 313
Query: 351 SDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTR 410
SDS+IFVQS NCN ++G+HPATVCKIP GC+LK+FNNQ FA LLAQSV+ GFE VY+LT+
Sbjct: 314 SDSSIFVQSRNCNYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTK 373
Query: 411 MCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
MCTIRMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVLTQMGSP SS+S
Sbjct: 374 MCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 430
>gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 536 bits (1381), Expect = e-152
Identities = 283/507 (55%), Positives = 332/507 (65%), Gaps = 84/507 (16%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
++S+ FT P VKRLLGWK Q +EEKW EKAV +LVKKLKK G ++
Sbjct: 3 VTSLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDALVKKLKKKKGAME 49
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELEKA++ + CVTIP RSLDGRLQVSH
Sbjct: 50 ELEKALSCPGQPSNCVTIP------------------------------RSLDGRLQVSH 79
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK +E CE+ F K+ EVC+NPYHY+RVE+PVLPPVL
Sbjct: 80 RKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVL 139
Query: 180 VPRHTE------ILTELPPLDDYTHSIPENTNFPAGIE-PQSNYIPETPPPGYISEDGET 232
VPRH+E +L + L +P N FP + P S+ P +P Y + G +
Sbjct: 140 VPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSS 199
Query: 233 SDQQLNQ--SMDTGSPAEL-----------------------------SPTTLSPVNHSL 261
S + S D GSP ++ +P S +N
Sbjct: 200 SSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPPLPSEINRG- 258
Query: 262 DLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSE-RFCLGLLSNVN 320
D+Q V Y EP WCSI YYELN RVGE FHAS S+ VDGFTDPSN++ RFCLGLLSNVN
Sbjct: 259 DVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVN 318
Query: 321 RNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGC 380
RN+T+E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS NCN +G+HP TVCKIP GC
Sbjct: 319 RNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGC 378
Query: 381 NLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIEL 440
+LKIFNNQEFA LLAQSVN GFE VY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWIE+
Sbjct: 379 SLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEI 438
Query: 441 HLNGPLQWLDKVLTQMGSPSVRCSSMS 467
HL+GPLQWLDKVLTQMGSP SS+S
Sbjct: 439 HLHGPLQWLDKVLTQMGSPHNPISSVS 465
>gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 536 bits (1381), Expect = e-152
Identities = 283/507 (55%), Positives = 332/507 (65%), Gaps = 84/507 (16%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
++S+ FT P VKRLLGWK Q +EEKW EKAV +LVKKLKK G ++
Sbjct: 3 VTSLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDALVKKLKKKKGAME 49
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELEKA++ + CVTIP RSLDGRLQVSH
Sbjct: 50 ELEKALSCPGQPSNCVTIP------------------------------RSLDGRLQVSH 79
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK +E CE+ F K+ EVC+NPYHY+RVE+PVLPPVL
Sbjct: 80 RKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVL 139
Query: 180 VPRHTE------ILTELPPLDDYTHSIPENTNFPAGIE-PQSNYIPETPPPGYISEDGET 232
VPRH+E +L + L +P N FP + P S+ P +P Y + G +
Sbjct: 140 VPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSS 199
Query: 233 SDQQLNQ--SMDTGSPAEL-----------------------------SPTTLSPVNHSL 261
S + S D GSP ++ +P S +N
Sbjct: 200 SSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPPLPSEINRG- 258
Query: 262 DLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSE-RFCLGLLSNVN 320
D+Q V Y EP WCSI YYELN RVGE FHAS S+ VDGFTDPSN++ RFCLGLLSNVN
Sbjct: 259 DVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVN 318
Query: 321 RNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGC 380
RN+T+E TRRHIG+GV LYY+GGEV+AECLSDS+IFVQS NCN +G+HP TVCKIP GC
Sbjct: 319 RNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGC 378
Query: 381 NLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIEL 440
+LKIFNNQEFA LLAQSVN GFE VY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWIE+
Sbjct: 379 SLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEI 438
Query: 441 HLNGPLQWLDKVLTQMGSPSVRCSSMS 467
HL+GPLQWLDKVLTQMGSP SS+S
Sbjct: 439 HLHGPLQWLDKVLTQMGSPHNPISSVS 465
>gi|187828357 SMAD family member 9 isoform a [Homo sapiens]
Length = 467
Score = 526 bits (1356), Expect = e-149
Identities = 282/504 (55%), Positives = 333/504 (66%), Gaps = 80/504 (15%)
Query: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKT-GRLD 59
+SS+ FT P VKRLLGWK Q +EEKW EKAV SLVKKLKK G +D
Sbjct: 7 ISSLFSFTSPAVKRLLGWK-------------QGDEEEKWAEKAVDSLVKKLKKKKGAMD 53
Query: 60 ELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSH 119
ELE+A++ +KCVTIP RSLDGRLQVSH
Sbjct: 54 ELERALSCPGQPSKCVTIP------------------------------RSLDGRLQVSH 83
Query: 120 RKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVL 179
RKGLPHVIYCR+WRWPDL SHHELK +E CE+ F K+ EVC+NPYHY+RVETPVLPPVL
Sbjct: 84 RKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYRRVETPVLPPVL 143
Query: 180 VPRHTEILTELPPLDDYT----HS---IPENTNFPAGIE-PQSNYIPETPP--------- 222
VPRH+E +L L + HS +P N +P + P + +P +P
Sbjct: 144 VPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQSPCT 203
Query: 223 ------PGYISE---------DGETSDQQLNQSMDTGSPAELSPTTLSPVNHSL---DLQ 264
PG SE D ++ +T S + T V S+ D +
Sbjct: 204 ASYPHSPGSPSEPESPYQHSVDTPPLPYHATEASETQSGQPVDATADRHVVLSIPNGDFR 263
Query: 265 PVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSE-RFCLGLLSNVNRNA 323
PV Y EP WCS+AYYELN RVGETF AS S+ +DGFTDPSN+ RFCLGLLSNVNRN+
Sbjct: 264 PVCYEEPQHWCSVAYYELNNRVGETFQASSRSVLIDGFTDPSNNRNRFCLGLLSNVNRNS 323
Query: 324 TVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLK 383
T+E TRRHIG+GV LYY+GGEV+AEC+SDS+IFVQS NCN ++G+HPATVCKIP GC+LK
Sbjct: 324 TIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPATVCKIPSGCSLK 383
Query: 384 IFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLN 443
+FNNQ FA LLAQSV+ GFE VY+LT+MCTIRMSFVKGWGAEY RQ VTSTPCWIE+HL+
Sbjct: 384 VFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLH 443
Query: 444 GPLQWLDKVLTQMGSPSVRCSSMS 467
GPLQWLDKVLTQMGSP SS+S
Sbjct: 444 GPLQWLDKVLTQMGSPHNPISSVS 467
>gi|223029444 mothers against decapentaplegic homolog 3 isoform 4
[Homo sapiens]
Length = 230
Score = 449 bits (1156), Expect = e-126
Identities = 212/231 (91%), Positives = 222/231 (96%), Gaps = 1/231 (0%)
Query: 237 LNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPS 296
+N SMD GSP LSP +SP +++LDLQPVTY EPAFWCSI+YYELNQRVGETFHASQPS
Sbjct: 1 MNHSMDAGSP-NLSPNPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPS 59
Query: 297 LTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIF 356
+TVDGFTDPSNSERFCLGLLSNVNRNA VE+TRRHIGRGVRLYYIGGEVFAECLSDSAIF
Sbjct: 60 MTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIF 119
Query: 357 VQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRM 416
VQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRM
Sbjct: 120 VQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRM 179
Query: 417 SFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
SFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPS+RCSS+S
Sbjct: 180 SFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 230
>gi|4885457 mothers against decapentaplegic homolog 4 [Homo sapiens]
Length = 552
Score = 168 bits (426), Expect = 8e-42
Identities = 101/241 (41%), Positives = 135/241 (56%), Gaps = 40/241 (16%)
Query: 256 PVNHSLDLQPVTYSEPA--FWCSIAYYELNQRVGETFH--ASQPSLTVDGFTDPSNSERF 311
PV++ L QP + PA +WCSIAY+E++ +VGETF +S P +TVDG+ DPS +RF
Sbjct: 303 PVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRF 362
Query: 312 CLGLLSNVNRNATVEMTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYGWHP 370
CLG LSNV+R +E R HIG+GV+L G G+V+ CLSD A+FVQS ++ G P
Sbjct: 363 CLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAP 422
Query: 371 A-TVCKIPPGCNLKIFN--------NQEFAALLAQSVNQGFE------------------ 403
V KI P +K+F+ Q+ A A + Q
Sbjct: 423 GDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAI 482
Query: 404 --------AVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQ 455
V L R+C +RMSFVKGWG +Y RQ++ TPCWIE+HL+ LQ LD+VL
Sbjct: 483 SLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHT 542
Query: 456 M 456
M
Sbjct: 543 M 543
Score = 126 bits (317), Expect = 4e-29
Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 33/168 (19%)
Query: 33 QNGQEEKWCEKAVKSLVKKLK-KTGRLDELEKAITTQNCN-TKCVTIPSTCSEIWGLSTP 90
Q G+ E + ++A++SLVKKLK K LD L AITT + +KCVTI
Sbjct: 28 QGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQ------------ 75
Query: 91 NTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCE 150
R+LDGRLQV+ RKG PHVIY RLWRWPDLH +ELK ++ C+
Sbjct: 76 ------------------RTLDGRLQVAGRKGFPHVIYARLWRWPDLHK-NELKHVKYCQ 116
Query: 151 YAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTH 198
YAF+LK D VCVNPYHY+RV +P + + + + + D+Y H
Sbjct: 117 YAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVH 164
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 131 bits (330), Expect = 1e-30
Identities = 100/332 (30%), Positives = 149/332 (44%), Gaps = 50/332 (15%)
Query: 115 LQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENC-EYAFNLKKDEVCVNPYHYQRVETP 173
L++ + P ++ RL+RWPDL ELK + C +A VC NPYH+ R+ P
Sbjct: 213 LRLGGQPAPPQLLLGRLFRWPDLQHAVELKPLCGCHSFAAAADGPTVCCNPYHFSRLCGP 272
Query: 174 VLPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETS 233
PP PP Y+ P + P + + ET
Sbjct: 273 ESPP-------------PP---YSRLSPRDEYKPLDLSDSTLSYTET------------- 303
Query: 234 DQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHAS 293
+ S+ T +P E S ++SP ++P+ WCS+AY+E RVG +
Sbjct: 304 --EATNSLIT-APGEFSDASMSP----------DATKPSHWCSVAYWEHRTRVGRLYAVY 350
Query: 294 QPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDS 353
++++ F D FCLG L+ R+ +V TR IG G+ L V+A +
Sbjct: 351 DQAVSI--FYDLPQGSGFCLGQLNLEQRSESVRRTRSKIGFGILLSKEPDGVWAYNRGEH 408
Query: 354 AIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCT 413
IFV SP + G V K+PPG ++K+F + E + L + Y +
Sbjct: 409 PIFVNSPTLDAP-GGRALVVRKVPPGYSIKVF-DFERSGLQHAPEPDAADGPYDPN---S 463
Query: 414 IRMSFVKGWGAEYRRQTVTSTPCWIELHLNGP 445
+R+SF KGWG Y RQ +TS PCW+E+ LN P
Sbjct: 464 VRISFAKGWGPCYSRQFITSCPCWLEILLNNP 495
>gi|5174517 SMAD family member 7 [Homo sapiens]
Length = 426
Score = 124 bits (310), Expect = 2e-28
Identities = 116/423 (27%), Positives = 181/423 (42%), Gaps = 78/423 (18%)
Query: 22 AGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDELEKAITTQN-CNTKCVTIPST 80
A G+G AGG E + + S++KKLK+ +L+ L +A+ ++ T C+ +P
Sbjct: 79 AAGAGAAGGAEAD------LKALTHSVLKKLKER-QLELLLQAVESRGGTRTACLLLPGR 131
Query: 81 CSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSH 140
G P YS LP ++ C+++RWPDL
Sbjct: 132 LDCRLGPGAPAGAQPAQPPSSYS-------------------LP-LLLCKVFRWPDLRHS 171
Query: 141 HELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTHSI 200
E+K + CE + + VC NP+H R+ PP PP Y
Sbjct: 172 SEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP-------------PPYSRY---- 214
Query: 201 PENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHS 260
P ++ + D + S +TG L+P LS +
Sbjct: 215 ---------------------PMDFLKPTADCPD-AVPSSAETGGTNYLAPGGLS--DSQ 250
Query: 261 LDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVN 320
L L+P + + WC +AY+E RVG + +PSL D F D FCLG L++ N
Sbjct: 251 LLLEP---GDRSHWCVVAYWEEKTRVGRLYCVQEPSL--DIFYDLPQGNGFCLGQLNSDN 305
Query: 321 RNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGC 380
++ V+ R IG G++L V+ S IF++S + V K+ PG
Sbjct: 306 KSQLVQKVRSKIGCGIQLTREVDGVWVYNRSSYPIFIKSATLDNPDS-RTLLVHKVFPGF 364
Query: 381 NLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIEL 440
++K F+ ++ +L Q N E + Q T+++SFVKGWG Y RQ ++S PCW+E+
Sbjct: 365 SIKAFDYEKAYSL--QRPND-HEFMQQPWTGFTVQISFVKGWGQCYTRQFISSCPCWLEV 421
Query: 441 HLN 443
N
Sbjct: 422 IFN 424
>gi|218749837 SMAD family member 6 isoform 2 [Homo sapiens]
Length = 235
Score = 105 bits (261), Expect = 1e-22
Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 242 DTGSPAELSPTTLS----PVNHSLDLQPVTYSE---------PAFWCSIAYYELNQRVGE 288
D P +LS +TLS +SL P +S+ P+ WCS+AY+E RVG
Sbjct: 25 DEYKPLDLSDSTLSYTETEATNSLITAPGEFSDASMSPDATKPSHWCSVAYWEHRTRVGR 84
Query: 289 TFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAE 348
+ ++++ F D FCLG L+ R+ +V TR IG G+ L V+A
Sbjct: 85 LYAVYDQAVSI--FYDLPQGSGFCLGQLNLEQRSESVRRTRSKIGFGILLSKEPDGVWAY 142
Query: 349 CLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQL 408
+ IFV SP + G V K+PPG ++K+F+ + A + + Y
Sbjct: 143 NRGEHPIFVNSPTLDAP-GGRALVVRKVPPGYSIKVFDFERSGLQHAPEPDAA-DGPYDP 200
Query: 409 TRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGP 445
++R+SF KGWG Y RQ +TS PCW+E+ LN P
Sbjct: 201 N---SVRISFAKGWGPCYSRQFITSCPCWLEILLNNP 234
>gi|11276067 snail 2 [Homo sapiens]
Length = 268
Score = 35.0 bits (79), Expect = 0.15
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 160 VCVNPYHYQRVETPVLPPVLVPRHTEILTE--LPPLDDYTHSIPENTNFPAGIEPQSNY- 216
V ++PY Y+ PV+P EIL+ P+ +T + P + P G+ P S Y
Sbjct: 27 VIISPYLYESYSMPVIP------QPEILSSGAYSPITVWTTAAPFHAQLPNGLSPLSGYS 80
Query: 217 -----IPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYS 269
+ PP S+D S+ ++ + P + +L TYS
Sbjct: 81 SSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYS 138
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 34.7 bits (78), Expect = 0.19
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Query: 176 PPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQ 235
PP LVP E E PP+ ++ P + P P S Y P + P S
Sbjct: 135 PPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQS 194
Query: 236 QLNQS--MDTGSPAELSPTTLSPVNHSLDLQPVTYSEPA 272
+QS T S + S ++ S ++HS P + + P+
Sbjct: 195 PPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPS 233
>gi|113865921 hypothetical protein LOC441457 [Homo sapiens]
Length = 492
Score = 34.3 bits (77), Expect = 0.25
Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 156 KKDEVCVNPYHYQR-VETPV-LPPVLVPR--HTEILTELPP---------LDDYTHSIPE 202
K C+ P QR ET LPP PR T++ E+PP +++ S P
Sbjct: 337 KAPTACLPPPRPQRPAETKAHLPPPRPPRPAETKVPEEIPPEVVQEYVDIMEELLGSHPG 396
Query: 203 NTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLD 262
+T P G + E P EDG TSD L +D E T + V H
Sbjct: 397 DTGEPEGQREKGKV--EQPQ----EEDGMTSDPGLLSYIDKLCSQEDFVTKVEAVIHPRF 450
Query: 263 LQPVTYSEPAFWCSIAYYELNQRVGETFHASQPS 296
L+ + +P EL Q G T PS
Sbjct: 451 LEELLSPDPQMDFLALSQELEQEEGLTLAQGAPS 484
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 33.5 bits (75), Expect = 0.42
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 199 SIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVN 258
S P+ + G +P IPE+ PP I+ T+ + + + P S T LS +
Sbjct: 1250 SQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGE--PAASSSRPVAPSGTALSTTS 1307
Query: 259 HSLDLQPVTYSEPAFWCSIAYYELNQ----RVGETFHASQPS 296
L+ P E F S+A L RVG+ +++P+
Sbjct: 1308 SKLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPT 1349
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 33.5 bits (75), Expect = 0.42
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 173 PVLPPVLVPRHTEILTELPPLDDY--THSIPENTNFPAGIEPQSNYIPETPPPGY---IS 227
P +PP+ VP L +PP+ S+P T P P S P PPP
Sbjct: 203 PSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP----PMSGMPPLNPPPVAPLPAG 258
Query: 228 EDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSI---AYYELNQ 284
+G + LN +++ L+P +N ++P+ + + S+ + +
Sbjct: 259 MNGSGAPMNLNNNLNPMFLGPLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMEN 318
Query: 285 RVGETFH 291
V + FH
Sbjct: 319 DVRDFFH 325
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 33.5 bits (75), Expect = 0.42
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 173 PVLPPVLVPRHTEILTELPPLDDY--THSIPENTNFPAGIEPQSNYIPETPPPGY---IS 227
P +PP+ VP L +PP+ S+P T P P S P PPP
Sbjct: 203 PSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP----PMSGMPPLNPPPVAPLPAG 258
Query: 228 EDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQPVTYSEPAFWCSI---AYYELNQ 284
+G + LN +++ L+P +N ++P+ + + S+ + +
Sbjct: 259 MNGSGAPMNLNNNLNPMFLGPLNPVNPIQMNSQSSVKPLPINPDDLYVSVHGMPFSAMEN 318
Query: 285 RVGETFH 291
V + FH
Sbjct: 319 DVRDFFH 325
>gi|46094081 development and differentiation enhancing factor 1 [Homo
sapiens]
Length = 1129
Score = 33.1 bits (74), Expect = 0.55
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 13/130 (10%)
Query: 154 NLKKDEVCVNPYHYQR----VETPVLPPV--LVPRHTEI-----LTELPPLDDYTHSIPE 202
+L D+ + P +Q+ E P PP L P+ TE+ + +LPP P+
Sbjct: 908 HLSLDKATIPPEIFQKSSQLAELPQKPPPGDLPPKPTELAPKPQIGDLPPKPGELPPKPQ 967
Query: 203 NTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLD 262
+ P +PQ + +P P + + D SP P+ ++ +H LD
Sbjct: 968 LGDLPP--KPQLSDLPPKPQMKDLPPKPQLGDLLAKSQTGDVSPKAQQPSEVTLKSHPLD 1025
Query: 263 LQPVTYSEPA 272
L P S A
Sbjct: 1026 LSPNVQSRDA 1035
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 32.7 bits (73), Expect = 0.72
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 135 PDLHSHHELKAIENCEYAFNLK----KDEVCVNPYHYQRVETPVLPPVLVPRHT-----E 185
PD+ +HH L E +F L+ ++ VN H Q V ++P ++ + E
Sbjct: 33 PDIDNHHALIEYNEAECSFVLQDFNSRNGTFVNECHIQNVAVKLIPGDILRFGSAGLTYE 92
Query: 186 ILTELPPLDDYTHSIPENTNFPAGIEPQSNYIP-ETPPPGYISEDGETSDQQLNQSMDTG 244
++ E PP + + +P P++ P + PPP +I + +S
Sbjct: 93 LVIENPPPVSFPW-MRGPAPWPGPQPPRATQQPNQAPPPSHIPFHQGVQPAPMQRSWSQA 151
Query: 245 SPAELSPTTLSPVNHSLDLQPVTYSEPAF 273
P PT + P +H +PV+ ++ F
Sbjct: 152 FP---RPTVVLPASHR---RPVSANKEMF 174
>gi|71274109 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, epsilon [Homo sapiens]
Length = 500
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 13/80 (16%)
Query: 199 SIPENTNFPAGIEPQSNYIPETPPPGYISE-------DGETSDQQLNQSMDT------GS 245
S+PE+T+ PA + P T PPG + E DGE +D S T G
Sbjct: 167 SLPESTSAPASGPSDGSPQPCTHPPGPVKEPQEKEDADGERADSTYGSSSLTYTLSLLGG 226
Query: 246 PAELSPTTLSPVNHSLDLQP 265
P P P+ H L P
Sbjct: 227 PEAEDPAPRLPLPHVGALSP 246
>gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens]
Length = 863
Score = 32.0 bits (71), Expect = 1.2
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 180 VPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQ 239
VP+ ++ ++P L D H G++P +P+ PP I +D + D+ +NQ
Sbjct: 595 VPKKFDVSIDMPDLLDINHLRAR------GLQPGEEELPDISPPIVIPDD--SKDRLMNQ 646
Query: 240 SMDTGSPAELSPTTLSPVNHSLD 262
+D E S L+ + L+
Sbjct: 647 LIDPSDIDESSVMQLAEMGFPLE 669
>gi|70980547 FYVE-finger-containing Rab5 effector protein
rabenosyn-5 [Homo sapiens]
Length = 784
Score = 31.6 bits (70), Expect = 1.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 218 PETPPPGYISEDGETSDQQLNQSMDTGSPAELSPTTLSPVNHSLDLQP 265
P++P P SE+ E Q+L+ + G+P E PT ++P D P
Sbjct: 682 PDSPAPNPFSEEDEHPQQRLSSPLVPGNPFE-EPTCINPFEMDSDSGP 728
>gi|34452173 integrin alpha X precursor [Homo sapiens]
Length = 1163
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 427 RRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSS 465
+R S W+ + LN W+D ++ +PS+RCSS
Sbjct: 962 QRDLPVSINFWVPVELNQEAVWMDVEVSHPQNPSLRCSS 1000
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,331,060
Number of Sequences: 37866
Number of extensions: 1093627
Number of successful extensions: 4549
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4433
Number of HSP's gapped (non-prelim): 85
length of query: 467
length of database: 18,247,518
effective HSP length: 106
effective length of query: 361
effective length of database: 14,233,722
effective search space: 5138373642
effective search space used: 5138373642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.