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Search of human proteins with 51092270
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51092270 hypothetical protein LOC375057 [Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51092270 hypothetical protein LOC375057 [Homo sapiens] 283 3e-77
gi|18702331 OTU domain containing 7A [Homo sapiens] 30 0.86
gi|122937440 multiple EGF-like-domains 9 [Homo sapiens] 30 0.86
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 29 1.1
gi|194097332 ephrin receptor EphB6 precursor [Homo sapiens] 29 1.5
gi|53988385 tweety 2 isoform 1 [Homo sapiens] 29 1.5
gi|51702206 solute carrier family 41 member 1 [Homo sapiens] 28 1.9
gi|154813195 DENN/MADD domain containing 2A [Homo sapiens] 28 1.9
gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens] 28 1.9
gi|12751477 forkhead box L2 [Homo sapiens] 28 2.5
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 28 2.5
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 28 2.5
gi|239753602 PREDICTED: hypothetical protein [Homo sapiens] 28 2.5
gi|239748177 PREDICTED: hypothetical protein XP_002346568 [Homo ... 28 2.5
gi|239742067 PREDICTED: hypothetical protein XP_002342405 [Homo ... 28 2.5
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 28 2.5
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 28 3.3
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 28 3.3
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 28 3.3
gi|28274705 family with sequence similarity 9, member A [Homo sa... 28 3.3
gi|18079216 CASK interacting protein 1 [Homo sapiens] 27 4.3
gi|102469037 jun D proto-oncogene [Homo sapiens] 27 4.3
gi|67906195 ankyrin repeat and sterile alpha motif domain contai... 27 4.3
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 27 4.3
gi|24497554 homeobox A13 [Homo sapiens] 27 7.3
gi|93277122 RNA binding motif protein 4 [Homo sapiens] 26 9.5
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens] 26 9.5
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens] 26 9.5
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens] 26 9.5
gi|73427803 lethal giant larvae homolog 2 isoform c [Homo sapiens] 26 9.5
>gi|51092270 hypothetical protein LOC375057 [Homo sapiens]
Length = 141
Score = 283 bits (725), Expect = 3e-77
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MEPSHKDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVICLFL 60
MEPSHKDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVICLFL
Sbjct: 1 MEPSHKDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVICLFL 60
Query: 61 NTFVPGLGTFVSAFTVLCGARTDLPDRHVCCVFWLNIAAALIQILTAIVMVGWIMSIFWG 120
NTFVPGLGTFVSAFTVLCGARTDLPDRHVCCVFWLNIAAALIQILTAIVMVGWIMSIFWG
Sbjct: 61 NTFVPGLGTFVSAFTVLCGARTDLPDRHVCCVFWLNIAAALIQILTAIVMVGWIMSIFWG 120
Query: 121 MDMVILAISQGYKEQGIPQQL 141
MDMVILAISQGYKEQGIPQQL
Sbjct: 121 MDMVILAISQGYKEQGIPQQL 141
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 29.6 bits (65), Expect = 0.86
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 2 EPSHKDAETAAAAAAVAAA----DPRGASSSSGVVVQVREKKGP 41
E +DA TAAAAAA AAA P + GV V R GP
Sbjct: 670 EQRRRDAATAAAAAAAAAAATAKRPPRRPETEGVPVPERASPGP 713
>gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]
Length = 639
Score = 29.6 bits (65), Expect = 0.86
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 8 AETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVA 54
A AAAAA +AA + G QV GP P PFP A
Sbjct: 16 AAAAAAAAVASAASAGNVTGGGGAAGQVDASPGPGLRGEPSHPFPRA 62
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 29.3 bits (64), Expect = 1.1
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 8 AETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFP 52
A AAAAA +A G+ + VV E+ GPL +P +PFP
Sbjct: 2 ATAAAAAAVMAPPGCPGSCPNFAVVCSFLERYGPL-LDLPELPFP 45
>gi|194097332 ephrin receptor EphB6 precursor [Homo sapiens]
Length = 1021
Score = 28.9 bits (63), Expect = 1.5
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 3 PSHKDAETAAAAAAVAAADPRGASSSSGVVVQVREKK-GPLRAAIPYMPFPVAVICLFL 60
PS + +++++AA A P GA +G+ + V+E+ GPL Y+ F CL L
Sbjct: 165 PSSSSSSSSSSSAAWAVG-PHGAGQRAGLQLNVKERSFGPLTQRGFYVAFQDTGACLAL 222
>gi|53988385 tweety 2 isoform 1 [Homo sapiens]
Length = 534
Score = 28.9 bits (63), Expect = 1.5
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 53 VAVICLFLNTFVPGLGTFVSAFTVL-CGARTD----LPDRHVCCVFWLNIAAALI 102
VA +CL LN F+ A+ V C R D H CC+ W + A LI
Sbjct: 51 VAAVCLGLNLI------FLVAYLVCACHCRRDDAVQTKQHHSCCITWTAVVAGLI 99
>gi|51702206 solute carrier family 41 member 1 [Homo sapiens]
Length = 513
Score = 28.5 bits (62), Expect = 1.9
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 64 VPGLGTFVSAFTVLCGARTDLPDRHVCCVFWLNIAAALIQILTAIVMVGWIMSIFWG 120
VPG F+ + + G T L + +F++ AAL+Q+L + + W++ WG
Sbjct: 417 VPGHLVFLYTISCMQGGHTTLT--LIFIIFYMT--AALLQVLILLYIADWMVHWMWG 469
>gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]
Length = 1009
Score = 28.5 bits (62), Expect = 1.9
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 29 SGVVVQVREKKG-------PLRAAIPYMPFPVAVICLFLNTFVPGLGTFVSAFTVLCGAR 81
S ++ +V +++G PL ++ PFP + + F+PG GT V +R
Sbjct: 678 SRILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTILVKNFLPGSGTEVIELCRPLDSR 737
Query: 82 TDLPD----------RHVCCVF 93
+ D RH+ CVF
Sbjct: 738 LEHVDFESLFSSLSVRHLVCVF 759
>gi|38348398 lipoma HMGIC fusion partner-like 4 [Homo sapiens]
Length = 247
Score = 28.5 bits (62), Expect = 1.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 53 VAVICLFLNTFVPGLGTFVSAFTVLCGARTDLPDRHVCCVFWLNIAAALIQILTAIVM 110
+A +CL L + G +CGA+T C V W I A+I IL A+++
Sbjct: 134 LAALCLVLGCMIFPDGWDAETIRDMCGAKTGKYSLGDCSVRWAYI-LAIIGILNALIL 190
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 28.1 bits (61), Expect = 2.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 5 HKDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPY 48
+ + AAAAAA AAA S G V+ GP + PY
Sbjct: 215 YASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPY 258
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 28.1 bits (61), Expect = 2.5
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 8 AETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVA 54
A AAAAAAVAAA P A++S+ +++ P P P PV+
Sbjct: 100 AAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAP-----PPPPPPVS 141
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 28.1 bits (61), Expect = 2.5
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 8 AETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVA 54
A AAAAAAVAAA P A++S+ +++ P P P PV+
Sbjct: 100 AAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAP-----PPPPPPVS 141
>gi|239753602 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 28.1 bits (61), Expect = 2.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 1 MEPSHKDAETAAAAAAVAAADPRGASSSS 29
++P H A TAAAAAA A +S+S
Sbjct: 28 LQPEHPGAATAAAAAAATATSAASTASTS 56
>gi|239748177 PREDICTED: hypothetical protein XP_002346568 [Homo
sapiens]
Length = 214
Score = 28.1 bits (61), Expect = 2.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 1 MEPSHKDAETAAAAAAVAAADPRGASSSS 29
++P H A TAAAAAA A +S+S
Sbjct: 28 LQPEHPGAATAAAAAAATATSAASTASTS 56
>gi|239742067 PREDICTED: hypothetical protein XP_002342405 [Homo
sapiens]
Length = 214
Score = 28.1 bits (61), Expect = 2.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 1 MEPSHKDAETAAAAAAVAAADPRGASSSS 29
++P H A TAAAAAA A +S+S
Sbjct: 28 LQPEHPGAATAAAAAAATATSAASTASTS 56
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 28.1 bits (61), Expect = 2.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 11 AAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVIC 57
A AAAAVAA GA++++ V P RA+ P P PV +C
Sbjct: 2 AGAAAAVAAGAAAGAAAAAVSVA------APGRASAPPPPPPVYCVC 42
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 27.7 bits (60), Expect = 3.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 17 VAAADPRGASSSSGVVVQVREKK 39
V ADP G SS SG V ++REK+
Sbjct: 2577 VCMADPEGLSSESGRVERLREKE 2599
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 27.7 bits (60), Expect = 3.3
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 3 PSHK-----DAETAAAAAAVAAADPRGASSSSGVVVQVREKK 39
PSH D AAAAAAVAAA ++++ V ++EK+
Sbjct: 134 PSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQ 175
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 27.7 bits (60), Expect = 3.3
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 3 PSHK-----DAETAAAAAAVAAADPRGASSSSGVVVQVREKK 39
PSH D AAAAAAVAAA ++++ V ++EK+
Sbjct: 134 PSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQ 175
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 27.7 bits (60), Expect = 3.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 6 KDAETAAAAAAVAAADPRGASSSSGVVVQVREKK 39
++AE AAAAA AAA A+++ +VV+ E++
Sbjct: 192 EEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEE 225
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 27.3 bits (59), Expect = 4.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 8 AETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAI 46
A AAAAAA A P GAS ++ E L AA+
Sbjct: 1346 AAAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAAL 1384
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 27.3 bits (59), Expect = 4.3
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 14/84 (16%)
Query: 1 MEPSHKD----AETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVI 56
+E HK A AAAAAA AA P G ++ S P P P A +
Sbjct: 144 LEDLHKQNQLGAGAAAAAAAAAAGGPSGTATGS----------APPGELAPAAAAPEAPV 193
Query: 57 CLFLNTFVPGLGTFVSAFTVLCGA 80
L+++ G G A TV A
Sbjct: 194 YANLSSYAGGAGGAGGAATVAFAA 217
>gi|67906195 ankyrin repeat and sterile alpha motif domain
containing 6 [Homo sapiens]
Length = 871
Score = 27.3 bits (59), Expect = 4.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 7 DAETAAAAAAVAAADP--RGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVIC 57
D ETA AA+P RGA +G E GP AA + PV V C
Sbjct: 21 DTETARRLLEPGAAEPAERGAEPEAGAEPAGAEVAGPGAAAAGAVGAPVPVDC 73
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 27.3 bits (59), Expect = 4.3
Identities = 17/50 (34%), Positives = 20/50 (40%)
Query: 3 PSHKDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFP 52
P+H +A AAA AA A P S G + P A P P P
Sbjct: 112 PAHPEAPAAAARAAALVAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTP 161
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 26.6 bits (57), Expect = 7.3
Identities = 15/23 (65%), Positives = 15/23 (65%)
Query: 8 AETAAAAAAVAAADPRGASSSSG 30
A AAAAAA AAA ASSS G
Sbjct: 116 AAAAAAAAAAAAAAAAAASSSGG 138
>gi|93277122 RNA binding motif protein 4 [Homo sapiens]
Length = 364
Score = 26.2 bits (56), Expect = 9.5
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 3 PSHKDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMP 50
P+ A TAAAAAA AAA ++S G + PLR A +P
Sbjct: 278 PTSGAAATAAAAAAAAAAVTAASTSYYG------RDRSPLRRATAPVP 319
>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
Length = 625
Score = 26.2 bits (56), Expect = 9.5
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 11 AAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFP 52
AAAAAA AA+ P SSSS + P RAA P P
Sbjct: 187 AAAAAAAAASAPSAGSSSSCSSASLPASPAP-RAARKASPSP 227
>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 26.2 bits (56), Expect = 9.5
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 11 AAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFP 52
AAAAAA AA+ P SSSS + P RAA P P
Sbjct: 189 AAAAAAAAASAPSAGSSSSCSSASLPASPAP-RAARKASPSP 229
>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 26.2 bits (56), Expect = 9.5
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 11 AAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFP 52
AAAAAA AA+ P SSSS + P RAA P P
Sbjct: 189 AAAAAAAAASAPSAGSSSSCSSASLPASPAP-RAARKASPSP 229
>gi|73427803 lethal giant larvae homolog 2 isoform c [Homo sapiens]
Length = 1020
Score = 26.2 bits (56), Expect = 9.5
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 41 PLRAAIPYMPFPVAVICLFL-NTFVPGLGTFVSAFTVLCGA--RTDLPDRHVCCV 92
PLR+ +PY PFP I L T GL FT+ G R DRH V
Sbjct: 268 PLRSLVPYGPFPCKAITRILWLTTRQGL-----PFTIFQGGMPRASYGDRHCISV 317
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,060,867
Number of Sequences: 37866
Number of extensions: 194484
Number of successful extensions: 1385
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1290
Number of HSP's gapped (non-prelim): 89
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.