Guide to the Human Genome
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Name: C1orf95 Sequence: fasta or formatted (141aa) NCBI GI: 51092270
Description:

hypothetical protein LOC375057

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.9         21           6
 C cysteine            2.8          4           2
 D aspartate           3.5          5           1
 E glutamate           2.8          4           1
 F phenylalanine       5.0          7           1
 G glycine             7.1         10           1
 H histidine           1.4          2           1
 I isoleucine          7.8         11           1
 K lysine              2.8          4           2
 L leucine             7.8         11           1
 M methionine          4.3          6           1
 N asparagine          1.4          2           1
 P proline             6.4          9           1
 Q glutamine           4.3          6           2
 R arginine            3.5          5           1
 S serine              5.7          8           4
 T threonine           4.3          6           1
 V valine             10.6         15           3
 W tryptophan          2.1          3           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC375057 
OTUD7A                0.019   OTU domain containing 7A 
MEGF9                 0.019   multiple EGF-like-domains 9 
RSF1                  0.016   remodeling and spacing factor 1 
EPHB6                 0.016   ephrin receptor EphB6 precursor 
TTYH2                 0.016   tweety 2 isoform 1 
SLC41A1               0.012   solute carrier family 41 member 1 
DENND2A               0.012   DENN/MADD domain containing 2A 
LHFPL4                0.012   lipoma HMGIC fusion partner-like 4 
FOXL2                 0.012   forkhead box L2 
MAZ                   0.012   MYC-associated zinc finger protein isoform 2 
MAZ                   0.012   MYC-associated zinc finger protein isoform 1 
LOC100292818          0.012   PREDICTED: hypothetical protein 
LOC100290830          0.012   PREDICTED: hypothetical protein XP_002346568 
LOC100289598          0.012   PREDICTED: hypothetical protein XP_002342405 
JHDM1D                0.012   jumonji C domain containing histone demethylase 1 ho...
MAP1A                 0.012   microtubule-associated protein 1A 
ZMIZ2                 0.012   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.012   zinc finger, MIZ-type containing 2 isoform 2 
FAM9A                 0.012   family with sequence similarity 9, member A 
CASKIN1               0.008   CASK interacting protein 1 
JUND                  0.008   jun D proto-oncogene 
ANKS6                 0.008   ankyrin repeat and sterile alpha motif domain contai...
ZIC5                  0.008   zinc finger protein of the cerebellum 5 
HOXA13                0.008   homeobox A13 
RBM4                  0.004   RNA binding motif protein 4 
LOC100130174          0.004   PREDICTED: hypothetical protein 
LOC100130174          0.004   PREDICTED: hypothetical protein 
LOC100130174          0.004   PREDICTED: hypothetical protein 
LLGL2                 0.004   lethal giant larvae homolog 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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