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Search of human proteins with 50345294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50345294 hematological and neurological expressed 1 isoform
2 [Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50345294 hematological and neurological expressed 1 isoform 2... 382 e-107
gi|7705877 hematological and neurological expressed 1 isoform 1 ... 200 5e-52
gi|50345292 hematological and neurological expressed 1 isoform 3... 106 1e-23
gi|21700763 hematological and neurological expressed 1-like [Hom... 45 3e-05
gi|74048537 praja 1 isoform b [Homo sapiens] 33 0.10
gi|41281725 praja 1 isoform a [Homo sapiens] 33 0.10
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 31 0.66
gi|27597090 suppressor of Ty 6 homolog [Homo sapiens] 31 0.66
gi|6912484 lysophospholipase 3 (lysosomal phospholipase A2) [Hom... 30 0.87
gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens] 30 1.5
gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens] 30 1.5
gi|21361831 partitioning-defective protein 3 homolog [Homo sapiens] 30 1.5
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 29 1.9
gi|119220585 apical early endosomal glycoprotein precursor [Homo... 29 1.9
gi|134244285 Notch homolog 3 [Homo sapiens] 29 2.5
gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens] 29 2.5
gi|154937342 ring finger protein 190 [Homo sapiens] 29 2.5
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 29 2.5
gi|154937340 ring finger protein 190 [Homo sapiens] 29 2.5
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 29 2.5
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 29 2.5
gi|4502435 BMX non-receptor tyrosine kinase [Homo sapiens] 28 3.3
gi|42544182 BMX non-receptor tyrosine kinase [Homo sapiens] 28 3.3
gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens] 28 3.3
gi|145275198 ADAMTS-like 3 precursor [Homo sapiens] 28 3.3
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 28 3.3
gi|93102424 hypothetical protein LOC23116 [Homo sapiens] 28 3.3
gi|169214023 PREDICTED: hypothetical protein [Homo sapiens] 28 4.3
gi|169214468 PREDICTED: hypothetical protein [Homo sapiens] 28 4.3
gi|31563503 activity-dependent neuroprotector [Homo sapiens] 28 4.3
>gi|50345294 hematological and neurological expressed 1 isoform 2
[Homo sapiens]
Length = 181
Score = 382 bits (981), Expect = e-107
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
Query: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKKMWTQTCQAAWGRVKRSPCLL 120
SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKKMWTQTCQAAWGRVKRSPCLL
Sbjct: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKKMWTQTCQAAWGRVKRSPCLL 120
Query: 121 RLCPARWPRPQCHPEEIPLAASPASSWVSSDCPERCRSVCFLHACELHNLSLTVHLLDLF 180
RLCPARWPRPQCHPEEIPLAASPASSWVSSDCPERCRSVCFLHACELHNLSLTVHLLDLF
Sbjct: 121 RLCPARWPRPQCHPEEIPLAASPASSWVSSDCPERCRSVCFLHACELHNLSLTVHLLDLF 180
Query: 181 H 181
H
Sbjct: 181 H 181
>gi|7705877 hematological and neurological expressed 1 isoform 1
[Homo sapiens]
Length = 154
Score = 200 bits (509), Expect = 5e-52
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
Query: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK 99
SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK
Sbjct: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK 99
>gi|50345292 hematological and neurological expressed 1 isoform 3
[Homo sapiens]
Length = 108
Score = 106 bits (265), Expect = 1e-23
Identities = 53/53 (100%), Positives = 53/53 (100%)
Query: 47 MASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK 99
MASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK
Sbjct: 1 MASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK 53
>gi|21700763 hematological and neurological expressed 1-like [Homo
sapiens]
Length = 190
Score = 45.4 bits (106), Expect = 3e-05
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 15 RNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEE--NQASWAKSAGAKSSG 72
R SR ++PPGG S+ G E R N+MASNIFG EE N G K SG
Sbjct: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
Query: 73 GREDLESSGLQRRNSSEASSGDFLDL 98
+ ES+ +Q R G D+
Sbjct: 71 IFD--ESTPVQTRQHLNPPGGKTSDI 94
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 33.5 bits (75), Expect = 0.10
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 25 GGGSNFSLGFDEPTEQPVRKNKMASN------IFGTPEENQASWAKSAGAKSSGGREDLE 78
GGG N S +EP +P +N + N F T +++ + S ++ E
Sbjct: 187 GGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEG-H 245
Query: 79 SSGLQRRNSSEASSG 93
S GL RR E+SSG
Sbjct: 246 SDGLARRGRGESSSG 260
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 33.5 bits (75), Expect = 0.10
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 25 GGGSNFSLGFDEPTEQPVRKNKMASN------IFGTPEENQASWAKSAGAKSSGGREDLE 78
GGG N S +EP +P +N + N F T +++ + S ++ E
Sbjct: 242 GGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEG-H 300
Query: 79 SSGLQRRNSSEASSG 93
S GL RR E+SSG
Sbjct: 301 SDGLARRGRGESSSG 315
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 30.8 bits (68), Expect = 0.66
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 106 CQAAWGRVKRSPCLLRLCPARWPRPQCHPEEIPLAASPASSWVSSDCPERCRSV 159
C+ + +P LL LC W P P PL+ P SS + R R++
Sbjct: 431 CEELLQEIDITPFLLALCGHTWGLPHAPPSPGPLSPGPFSSSMEEGAEPRERAI 484
>gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]
Length = 1726
Score = 30.8 bits (68), Expect = 0.66
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 25 GGGSNFSLGFDEPTEQPVRKNKMA--------SNIFGTPEENQASWAKSAGAKSSGGRED 76
GGGS+ F P +QPV M S TP+ +Q S +S+ +
Sbjct: 1595 GGGSSAYHVFPTPAQQPVATPLMTPSYSYTTPSQPITTPQYHQLQ--ASTTPQSAQAQPQ 1652
Query: 77 LESSGLQRRNSSEASSGDFLDLKKM---WTQTCQAAWGRVKRSPCLLRLCPARWPRPQCH 133
SS QR+ +++S +D KM W Q +A + K+ RL P P P
Sbjct: 1653 PSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQ-----RLTPRPSPSPMIE 1707
Query: 134 PEEIPLA 140
+ +A
Sbjct: 1708 STPMSIA 1714
>gi|6912484 lysophospholipase 3 (lysosomal phospholipase A2) [Homo
sapiens]
Length = 412
Score = 30.4 bits (67), Expect = 0.87
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 21 LRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESS 80
+R PG G FSL F +P++ V + F T E+ W + G ED+ +
Sbjct: 113 VRVPGFGKTFSLEFLDPSKSSV------GSYFHTMVESLVGWGYTRG-------EDVRGA 159
Query: 81 GLQRRNSSEASSGDFLDLKKMWTQTCQAAWGRV 113
R + + FL L++M + Q G V
Sbjct: 160 PYDWRRAPNENGPYFLALREMIEEMYQLYGGPV 192
>gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens]
Length = 520
Score = 29.6 bits (65), Expect = 1.5
Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 56 EENQASWAKSAGAKSSGGRED--LESSGLQRRNSSEASSGDFLDLKKMWTQTCQAAWGRV 113
+E+QA AG SG + S G +SS+ S W T ++W R
Sbjct: 352 QEHQAPGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRS----------WASTVDSSWDRA 401
Query: 114 KRSPCLLRLCPARWPRPQCHPEEIPLAASPASSWVSSDCPE 154
S L P + P H E +P S + PE
Sbjct: 402 GSSGYLAEKGPGQGPGGDGHQESLPPPEFSKDSGFLEELPE 442
>gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens]
Length = 491
Score = 29.6 bits (65), Expect = 1.5
Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 56 EENQASWAKSAGAKSSGGRED--LESSGLQRRNSSEASSGDFLDLKKMWTQTCQAAWGRV 113
+E+QA AG SG + S G +SS+ S W T ++W R
Sbjct: 323 QEHQAPGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRS----------WASTVDSSWDRA 372
Query: 114 KRSPCLLRLCPARWPRPQCHPEEIPLAASPASSWVSSDCPE 154
S L P + P H E +P S + PE
Sbjct: 373 GSSGYLAEKGPGQGPGGDGHQESLPPPEFSKDSGFLEELPE 413
>gi|21361831 partitioning-defective protein 3 homolog [Homo sapiens]
Length = 1356
Score = 29.6 bits (65), Expect = 1.5
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 6 TFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKS 65
T G P R R++R G +F D+ ++P + T EE+ ++S
Sbjct: 901 TLNGDIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPAVDDDDEG--METLEEDTEESSRS 958
Query: 66 AGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKK 100
G +S D S L+R+ + GD D KK
Sbjct: 959 -GRESVSTASDQPSHSLERQMNGNQEKGDKTDRKK 992
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 29.3 bits (64), Expect = 1.9
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 28/127 (22%)
Query: 35 DEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGD 94
+ P+++P+ S EE A + K GG+EDL SS + + SS G
Sbjct: 1160 EPPSKRPLSSKSQQSVSAEDDEEEDAGFFK-------GGKEDLLSSSVPKWPSSSTPRGG 1212
Query: 95 FLDLKKMWTQTCQAAWGRVKRSPCLL------RLCPARWPRPQCHPEEIPLAASPASSWV 148
+ + + +R P + L P + P P P +SP +S V
Sbjct: 1213 ---------KDADGSLAKEEREPAIALAPRGGSLAPVKRPLPP------PPGSSPRASHV 1257
Query: 149 SSDCPER 155
S P R
Sbjct: 1258 PSRLPPR 1264
>gi|119220585 apical early endosomal glycoprotein precursor [Homo
sapiens]
Length = 1137
Score = 29.3 bits (64), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 56 EENQASWAKSAGAKSSGGREDLESSGLQRRN--------SSEASSGDFLDLKKMWTQ 104
E+ QA + +GG ED LQ R SS A++G FL L++ W Q
Sbjct: 485 EDEQACGTTDFESPEAGGWEDASVGRLQWRRVSAQESQGSSAAAAGHFLSLQRAWGQ 541
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 28.9 bits (63), Expect = 2.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Query: 122 LCPARWPRPQCHPEEIPLAASPASSWVSSDCPERCRSVC 160
LCP P C P P A P S + D P R VC
Sbjct: 682 LCPPGSLPPLCLPPSHPCAHEPCSHGICYDAPGGFRCVC 720
>gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens]
Length = 986
Score = 28.9 bits (63), Expect = 2.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 55 PEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASS 92
P ASWA+ ++ +G RED+ G +SS ++
Sbjct: 469 PRPEHASWARGGPSRETGRREDITGPGSPSVDSSSVTT 506
>gi|154937342 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 28.9 bits (63), Expect = 2.5
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 8 KGVDPNSRN----SSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWA 63
K + N+ N SSR P G S + TE+P +++ + G P+
Sbjct: 330 KNFEENAENCRGHSSRRSEPSHGSLRISNAMEPATERPSAGQRLSQDP-GLPDR------ 382
Query: 64 KSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKKMWT 103
+SA K GG E+ + S L SE ++ + +W+
Sbjct: 383 ESATEKDRGGSENAKKSPLSWDTKSEPRQEVGVNAENVWS 422
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 28.9 bits (63), Expect = 2.5
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 9/34 (26%)
Query: 128 PRPQC-----HPEEIPLAASPASSWVSSDCPERC 156
PR QC H IPL SWVSS C E+C
Sbjct: 2263 PRSQCGCKDAHGGSIPLG----KSWVSSGCTEKC 2292
>gi|154937340 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 28.9 bits (63), Expect = 2.5
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 8 KGVDPNSRN----SSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWA 63
K + N+ N SSR P G S + TE+P +++ + G P+
Sbjct: 330 KNFEENAENCRGHSSRRSEPSHGSLRISNAMEPATERPSAGQRLSQDP-GLPDR------ 382
Query: 64 KSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKKMWT 103
+SA K GG E+ + S L SE ++ + +W+
Sbjct: 383 ESATEKDRGGSENAKKSPLSWDTKSEPRQEVGVNAENVWS 422
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 28.9 bits (63), Expect = 2.5
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 9/34 (26%)
Query: 128 PRPQC-----HPEEIPLAASPASSWVSSDCPERC 156
PR QC H IPL SWVSS C E+C
Sbjct: 2263 PRSQCGCKDAHGGSIPLG----KSWVSSGCTEKC 2292
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 28.9 bits (63), Expect = 2.5
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 16/79 (20%)
Query: 30 FSLGFDEPTEQPVRKNKMASNIFGTPEENQ---------------ASWAKSAGAKSSGGR 74
+++ + P + V KM +FG ++NQ WA S+ A R
Sbjct: 502 YTIELENPNSEEVEARKMIDKVFGV-DDNQDYNRPVINEKHKDLIKDWALSSAAAVMEER 560
Query: 75 EDLESSGLQRRNSSEASSG 93
+ L +SG +SSG
Sbjct: 561 KPLTTSGFHHSEEGTSSSG 579
>gi|4502435 BMX non-receptor tyrosine kinase [Homo sapiens]
Length = 675
Score = 28.5 bits (62), Expect = 3.3
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 2 TTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQAS 61
+++TT D S+ + +PP S+ SL + + + ++ N+ P E+
Sbjct: 186 SSSTTLAQYDNESKKNYGS-QPPS--SSTSLAQYDSNSKKIYGSQPNFNMQYIPREDFPD 242
Query: 62 WAKSAGAKSSGGREDLESSGLQRRNSSEASS 92
W + KSS ED+ SS + RN + +S
Sbjct: 243 WWQVRKLKSSSSSEDVASSNQKERNVNHTTS 273
>gi|42544182 BMX non-receptor tyrosine kinase [Homo sapiens]
Length = 675
Score = 28.5 bits (62), Expect = 3.3
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 2 TTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQAS 61
+++TT D S+ + +PP S+ SL + + + ++ N+ P E+
Sbjct: 186 SSSTTLAQYDNESKKNYGS-QPPS--SSTSLAQYDSNSKKIYGSQPNFNMQYIPREDFPD 242
Query: 62 WAKSAGAKSSGGREDLESSGLQRRNSSEASS 92
W + KSS ED+ SS + RN + +S
Sbjct: 243 WWQVRKLKSSSSSEDVASSNQKERNVNHTTS 273
>gi|226051634 zinc finger protein 414 isoform 1 [Homo sapiens]
Length = 390
Score = 28.5 bits (62), Expect = 3.3
Identities = 30/104 (28%), Positives = 37/104 (35%), Gaps = 25/104 (24%)
Query: 53 GTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKKMWTQT------C 106
G P + A W KS GA SS R + S+A SG + +W T
Sbjct: 278 GPPASSAAVWKKSQGAGSSPRRP---------QGGSDAPSGHAAPSRIVWEHTRGRYSCM 328
Query: 107 QAAWGRVKRSPCLLRL---------CPARW-PRPQCHPEEIPLA 140
Q A+ R L L PA PRP + PLA
Sbjct: 329 QCAFSTASRPAMTLHLEDHRPGAPAAPAAGPPRPDAPADPAPLA 372
>gi|145275198 ADAMTS-like 3 precursor [Homo sapiens]
Length = 1691
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 19/68 (27%)
Query: 117 PCLLRLCPARW---PRPQC--------HPEEIPLAASPASSWVSSDCPERC--------R 157
PC +R CPARW QC H ++ + A+ V P C R
Sbjct: 1477 PCNIRDCPARWFTSVWSQCSVSCGEGYHSRQVTCKRTKANGTVQVVSPRACAPKDRPLGR 1536
Query: 158 SVCFLHAC 165
CF H C
Sbjct: 1537 KPCFGHPC 1544
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 28.5 bits (62), Expect = 3.3
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 56 EENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGD 94
+ +Q+SW S ++ GG ++ + +G Q S++ G+
Sbjct: 1042 QRDQSSWQNSDASQEVGGHQERQQAGAQGPGSADLEDGE 1080
>gi|93102424 hypothetical protein LOC23116 [Homo sapiens]
Length = 1720
Score = 28.5 bits (62), Expect = 3.3
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 41 PVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQR--RNSSEA 90
P + +AS + E +SW++S G S G ED L R R+ SEA
Sbjct: 61 PTTTSPLASALLMPSEAVSSSWSESGGGLSGGDEEDTRLLQLLRTARDPSEA 112
>gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 28.1 bits (61), Expect = 4.3
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 12 PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSS 71
P + +SS RPP G PT +P K A + P W + AG +S+
Sbjct: 68 PPTPHSSIPPRPPSPWGPRVWG--APTHRPALKGTEAQLLAPGPAAGSGCWPELAGTESA 125
Query: 72 GGREDLESSGLQ--RRNSSEASSG 93
+ E G + R S SSG
Sbjct: 126 SAEREREGGGPRSIRPRPSLLSSG 149
>gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 28.1 bits (61), Expect = 4.3
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 12 PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSS 71
P + +SS RPP G PT +P K A + P W + AG +S+
Sbjct: 68 PPTPHSSIPPRPPSPWGPRVWG--APTHRPALKGTEAQLLAPGPAAGSGCWPELAGTESA 125
Query: 72 GGREDLESSGLQ--RRNSSEASSG 93
+ E G + R S SSG
Sbjct: 126 SAEREREGGGPRSIRPRPSLLSSG 149
>gi|31563503 activity-dependent neuroprotector [Homo sapiens]
Length = 1102
Score = 28.1 bits (61), Expect = 4.3
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 12 PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVR-------KNKMASNIFGTPEENQASWAK 64
P S + L P G G ++ LG ++ ++ P R + ++S +P +Q+ ++
Sbjct: 360 PQQSQSVKQLLPSGNGRSYGLGSEQRSQAPARYSLQSANASSLSSGQLKSPSLSQSQASR 419
Query: 65 SAGAKSS 71
G SS
Sbjct: 420 VLGQSSS 426
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,438,932
Number of Sequences: 37866
Number of extensions: 411727
Number of successful extensions: 1410
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1380
Number of HSP's gapped (non-prelim): 69
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.