Guide to the Human Genome
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Name: ADAMTSL3 Sequence: fasta or formatted (1691aa) NCBI GI: 145275198
Description:

ADAMTS-like 3 precursor

Referenced in:

Metalloproteases
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         95           2
 C cysteine            6.2        104           2
 D aspartate           4.3         72           3
 E glutamate           6.2        105           3
 F phenylalanine       2.4         41           3
 G glycine             7.2        121           3
 H histidine           3.0         50           1
 I isoleucine          4.1         70           2
 K lysine              5.2         88           3
 L leucine             7.2        121           3
 M methionine          1.8         30           2
 N asparagine          3.9         66           2
 P proline             7.0        118           3
 Q glutamine           5.7         97           2
 R arginine            6.3        106           2
 S serine              7.5        126           3
 T threonine           6.2        104           2
 V valine              6.0        101           3
 W tryptophan          2.2         37           2
 Y tyrosine            2.3         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAMTS-like 3 precursor 
ADAMTSL1              0.390   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.216   ADAMTS-like 1 isoform 2 precursor 
ADAMTS20              0.079   a disintegrin-like and metalloprotease with thrombo...
ADAMTS9               0.075   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.073   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.073   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.073   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.072   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.067   ADAM metallopeptidase with thrombospondin type 1 mo...
PAPLN                 0.066   papilin 
ADAMTS17              0.062   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.061   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.061   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.061   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.058   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.057   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS3               0.053   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.051   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.051   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS15              0.049   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS1               0.049   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.049   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS8               0.042   ADAM metallopeptidase with thrombospondin type 1 mo...
THSD4                 0.042   thrombospondin, type I, domain containing 4 
ADAMTS5               0.038   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.036   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTSL4              0.035   thrombospondin repeat containing 1 isoform 1 
ADAMTSL2              0.032   ADAMTS-like 2 precursor 
ADAMTSL2              0.032   ADAMTS-like 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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