Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL28RA Sequence: fasta or formatted (520aa) NCBI GI: 25014103
Description:

interleukin 28 receptor, alpha isoform 1

Referenced in:

Interferon
Interleukins and Their Receptors

Other entries for this name:
alt prot [491aa] interleukin 28 receptor, alpha isoform 2
alt prot [244aa] interleukin 28 receptor, alpha isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         36           2
 C cysteine            1.7          9           1
 D aspartate           4.2         22           1
 E glutamate           9.2         48           5
 F phenylalanine       3.7         19           1
 G glycine             7.3         38           2
 H histidine           1.7          9           2
 I isoleucine          1.5          8           1
 K lysine              3.7         19           2
 L leucine            10.2         53           3
 M methionine          1.3          7           2
 N asparagine          2.1         11           1
 P proline            10.6         55           3
 Q glutamine           4.4         23           2
 R arginine            5.2         27           3
 S serine              9.0         47           2
 T threonine           6.0         31           1
 V valine              5.6         29           1
 W tryptophan          3.1         16           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.927   interleukin 28 receptor, alpha isoform 2 
IL28RA                0.419   interleukin 28 receptor, alpha isoform 3 
IL22RA2               0.036   interleukin 22-binding protein isoform 2 
IL22RA2               0.028   interleukin 22-binding protein isoform 3 
IL20RA                0.028   interleukin 20 receptor, alpha 
IL22RA2               0.025   interleukin 22-binding protein isoform 1 
IL20RB                0.019   interleukin 20 receptor beta precursor 
TNRC6C                0.018   trinucleotide repeat containing 6C isoform 1 
TNRC6C                0.018   trinucleotide repeat containing 6C isoform 2 
IL10RB                0.015   interleukin 10 receptor, beta precursor 
IFNAR1                0.012   interferon-alpha receptor 1 precursor 
PPARGC1B              0.011   peroxisome proliferator-activated receptor gamma, co...
HDGFL1                0.011   hepatoma derived growth factor-like 1 
SETD1A                0.011   SET domain containing 1A 
PPP1R15A              0.011   protein phosphatase 1, regulatory subunit 15A [Homo...
PELP1                 0.010   proline, glutamic acid and leucine rich protein 1 [...
AEBP2                 0.010   AE binding protein 2 isoform b 
AEBP2                 0.010   AE binding protein 2 isoform a 
SLC4A3                0.009   solute carrier family 4, anion exchanger, member 3 ...
TTBK1                 0.009   tau tubulin kinase 1 
NES                   0.008   nestin 
PRUNE2                0.008   prune homolog 2 
TNRC6A                0.008   trinucleotide repeat containing 6A 
HNRNPU                0.008   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.008   heterogeneous nuclear ribonucleoprotein U isoform a ...
MLL2                  0.008   myeloid/lymphoid or mixed-lineage leukemia 2 
BAZ2B                 0.008   bromodomain adjacent to zinc finger domain, 2B [Homo...
SMARCA4               0.008   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.008   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press