Guide to the Human Genome
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Name: PLA2G15 Sequence: fasta or formatted (412aa) NCBI GI: 6912484
Description:

lysophospholipase 3 (lysosomal phospholipase A2)

Referenced in:

Bile Acids and Other Cholesterol Derivatives
Lipid Metabolism
Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         21           1
 C cysteine            1.2          5           1
 D aspartate           5.3         22           1
 E glutamate           4.9         20           2
 F phenylalanine       4.1         17           2
 G glycine             8.3         34           2
 H histidine           1.9          8           1
 I isoleucine          3.4         14           2
 K lysine              3.9         16           2
 L leucine            13.3         55           5
 M methionine          2.4         10           1
 N asparagine          3.2         13           2
 P proline             7.5         31           2
 Q glutamine           4.4         18           2
 R arginine            5.6         23           2
 S serine              5.1         21           2
 T threonine           5.3         22           2
 V valine              7.5         31           2
 W tryptophan          2.4         10           1
 Y tyrosine            5.1         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysophospholipase 3 (lysosomal phospholipase A2) [Hom... 
LCAT                  0.451   lecithin-cholesterol acyltransferase precursor 
HN1                   0.006   hematological and neurological expressed 1 isoform 2...
GABRG3                0.005   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
TTMA                  0.005   hypothetical protein LOC645369 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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