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Search of human proteins with 5031821
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031821 potassium channel, subfamily K, member 7 isoform C
[Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031821 potassium channel, subfamily K, member 7 isoform C [H... 513 e-146
gi|16118235 potassium channel, subfamily K, member 7 isoform B [... 479 e-136
gi|16118233 potassium channel, subfamily K, member 7 isoform B [... 479 e-136
gi|16118231 potassium channel, subfamily K, member 7 isoform A [... 478 e-135
gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens] 172 3e-43
gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens] 132 3e-31
gi|14589851 potassium channel, subfamily K, member 2 isoform b [... 110 9e-25
gi|126365795 potassium channel, subfamily K, member 2 isoform c ... 110 9e-25
gi|62912487 potassium channel, subfamily K, member 2 isoform a [... 110 9e-25
gi|20143946 potassium channel, subfamily K, member 10 isoform 3 ... 110 9e-25
gi|20143944 potassium channel, subfamily K, member 10 isoform 2 ... 110 9e-25
gi|10863961 potassium channel, subfamily K, member 10 isoform 1 ... 110 9e-25
gi|205360983 potassium channel, subfamily K, member 16 isoform 3... 107 1e-23
gi|14149764 potassium channel, subfamily K, member 16 isoform 2 ... 107 1e-23
gi|205360973 potassium channel, subfamily K, member 16 isoform 4... 105 5e-23
gi|205360971 potassium channel, subfamily K, member 16 isoform 1... 105 5e-23
gi|17025230 potassium channel, subfamily K, member 17 isoform 1 ... 94 9e-20
gi|205361107 potassium channel, subfamily K, member 17 isoform 2... 92 6e-19
gi|15718767 TRAAK [Homo sapiens] 91 1e-18
gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens] 87 1e-17
gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens] 84 2e-16
gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens] 81 1e-15
gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens] 75 6e-14
gi|11545761 potassium channel, subfamily K, member 12 [Homo sapi... 69 3e-12
gi|16306555 potassium channel, subfamily K, member 13 [Homo sapi... 54 1e-07
gi|32469495 potassium channel, subfamily K, member 18 [Homo sapi... 47 1e-05
gi|170650615 protoporphyrinogen oxidase [Homo sapiens] 36 0.029
gi|4506001 protoporphyrinogen oxidase [Homo sapiens] 36 0.029
gi|5031819 potassium voltage-gated channel, shaker-related subfa... 34 0.11
gi|25952092 potassium voltage-gated channel, shaker-related subf... 33 0.19
>gi|5031821 potassium channel, subfamily K, member 7 isoform C [Homo
sapiens]
Length = 257
Score = 513 bits (1320), Expect = e-146
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
Sbjct: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
Query: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
Sbjct: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
Query: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
Sbjct: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
Query: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
Sbjct: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
Query: 241 KSSHLTACGGRGKRSLD 257
KSSHLTACGGRGKRSLD
Sbjct: 241 KSSHLTACGGRGKRSLD 257
>gi|16118235 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 479 bits (1234), Expect = e-136
Identities = 242/252 (96%), Positives = 243/252 (96%)
Query: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
Sbjct: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
Query: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
Sbjct: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
Query: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
Sbjct: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
Query: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
Sbjct: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
Query: 241 KSSHLTACGGRG 252
+ L G
Sbjct: 241 GGTSLQGTAWEG 252
>gi|16118233 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 479 bits (1234), Expect = e-136
Identities = 242/252 (96%), Positives = 243/252 (96%)
Query: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
Sbjct: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
Query: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
Sbjct: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
Query: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
Sbjct: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
Query: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
Sbjct: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
Query: 241 KSSHLTACGGRG 252
+ L G
Sbjct: 241 GGTSLQGTAWEG 252
>gi|16118231 potassium channel, subfamily K, member 7 isoform A
[Homo sapiens]
Length = 307
Score = 478 bits (1230), Expect = e-135
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
Sbjct: 1 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 60
Query: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
Sbjct: 61 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 120
Query: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
Sbjct: 121 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 180
Query: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
Sbjct: 181 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 240
>gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens]
Length = 336
Score = 172 bits (436), Expect = 3e-43
Identities = 95/215 (44%), Positives = 127/215 (59%), Gaps = 2/215 (0%)
Query: 10 YGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGT 69
+G LV+ +LL L GAVVF ++E P L+ ELR F EH CL LE+ LG
Sbjct: 23 FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHE-CLSEQQLEQFLGR 81
Query: 70 ALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALG 129
L +GVS L N+S WD SAL FA+++L+TTGYGH PLS GGKAFC++Y+ +G
Sbjct: 82 VLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIG 141
Query: 130 LPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVASSFVLLPAL 188
+P +L L A ++ + V RP + + W S A++ AV LG + S F +PA
Sbjct: 142 IPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQVVAIVHAVLLGFVTVSCFFFIPAA 201
Query: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRG 223
V L+ D + L + YFCF SLSTIGL D +PG G
Sbjct: 202 VFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEG 236
>gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens]
Length = 313
Score = 132 bits (332), Expect = 3e-31
Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 12/228 (5%)
Query: 14 VVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALAT 73
+ A+ L LGA++ LEGP RL+AEL L A + C+ AL+ + LA
Sbjct: 11 LAAYAAYLVLGALLVARLEGPHEARLRAELET-LRAQLLQRSPCVAAPALDAFVERVLAA 69
Query: 74 QAHGVSTLGNSSEGRT-----WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAAL 128
G L N+S WD SAL FA++++TT GYG+ PL+ GKAF + +A L
Sbjct: 70 GRLGRVVLANASGSANASDPAWDFASALFFASTLITTVGYGYTTPLTDAGKAFSIAFALL 129
Query: 129 GLPAS-LALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVASSFVLLPA 187
G+P + L L A+ + L + P +W+++ W P RAA VAL +V + L+PA
Sbjct: 130 GVPTTMLLLTASAQRLSLLLTHVPLSWLSMRWGWDPRRAACWHLVALLGVVVTVCFLVPA 189
Query: 188 LVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRG-----RSLHPVI 230
++ L+ S L A YFCF SLSTIGL D +PG R+L+ V+
Sbjct: 190 VIFAHLEEAWSFLDAFYFCFISLSTIGLGDYVPGEAPGQPYRALYKVL 237
Score = 28.5 bits (62), Expect = 6.0
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
Query: 90 WDLPSALLFAASILTTTGYGHMAPLSPGG-------KAFCMVYAALGLPASLALVATLRH 142
W A F L+T G G P G K VY LGL A + ++ T RH
Sbjct: 199 WSFLDAFYFCFISLSTIGLGDYVPGEAPGQPYRALYKVLVTVYLFLGLVAMVLVLQTFRH 258
>gi|14589851 potassium channel, subfamily K, member 2 isoform b
[Homo sapiens]
Length = 411
Score = 110 bits (276), Expect = 9e-25
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 6/219 (2%)
Query: 7 WSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEEL 66
W + + +L L +GA VF+ALE P + + + F ++H +C+ L+EL
Sbjct: 44 WKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNSTELDEL 102
Query: 67 LGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVY 125
+ +A G+ LGN+S + WDL S+ FA +++TT G+G+++P + GGK FC++Y
Sbjct: 103 IQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIY 162
Query: 126 AALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGLLVASSF 182
A LG+P L+A + L + + A V + W +S + ++ + L F
Sbjct: 163 ALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLF 222
Query: 183 VLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
V LPA++ ++G S L A+YF +L+TIG D + G
Sbjct: 223 VALPAIIFKHIEG-WSALDAIYFVVITLTTIGFGDYVAG 260
>gi|126365795 potassium channel, subfamily K, member 2 isoform c
[Homo sapiens]
Length = 426
Score = 110 bits (276), Expect = 9e-25
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 6/219 (2%)
Query: 7 WSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEEL 66
W + + +L L +GA VF+ALE P + + + F ++H +C+ L+EL
Sbjct: 59 WKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNSTELDEL 117
Query: 67 LGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVY 125
+ +A G+ LGN+S + WDL S+ FA +++TT G+G+++P + GGK FC++Y
Sbjct: 118 IQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIY 177
Query: 126 AALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGLLVASSF 182
A LG+P L+A + L + + A V + W +S + ++ + L F
Sbjct: 178 ALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLF 237
Query: 183 VLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
V LPA++ ++G S L A+YF +L+TIG D + G
Sbjct: 238 VALPAIIFKHIEG-WSALDAIYFVVITLTTIGFGDYVAG 275
>gi|62912487 potassium channel, subfamily K, member 2 isoform a
[Homo sapiens]
Length = 422
Score = 110 bits (276), Expect = 9e-25
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 6/219 (2%)
Query: 7 WSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEEL 66
W + + +L L +GA VF+ALE P + + + F ++H +C+ L+EL
Sbjct: 55 WKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNSTELDEL 113
Query: 67 LGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVY 125
+ +A G+ LGN+S + WDL S+ FA +++TT G+G+++P + GGK FC++Y
Sbjct: 114 IQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIY 173
Query: 126 AALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGLLVASSF 182
A LG+P L+A + L + + A V + W +S + ++ + L F
Sbjct: 174 ALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFILFGCVLF 233
Query: 183 VLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
V LPA++ ++G S L A+YF +L+TIG D + G
Sbjct: 234 VALPAIIFKHIEG-WSALDAIYFVVITLTTIGFGDYVAG 271
>gi|20143946 potassium channel, subfamily K, member 10 isoform 3
[Homo sapiens]
Length = 543
Score = 110 bits (276), Expect = 9e-25
Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 9/227 (3%)
Query: 2 GGLRP---WSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACL 58
GGL+ W + V ++ L G +VF+ALE P + + E A F +H C+
Sbjct: 66 GGLQTVMKWKTVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDH-VCV 124
Query: 59 PPGALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPG 117
P LE L+ AL GVS +GNSS + WDL SA FA +++TT GYG++AP + G
Sbjct: 125 SPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEG 184
Query: 118 GKAFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHW---QLSPARAALLQAVAL 174
GK FC++YA G+P L+A + L + + A V + Q+S + ++ +
Sbjct: 185 GKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILF 244
Query: 175 GLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
L FV +PA++ ++G + L ++YF +L+T+G D + G
Sbjct: 245 ILAGCIVFVTIPAVIFKYIEG-WTALESIYFVVVTLTTVGFGDFVAG 290
>gi|20143944 potassium channel, subfamily K, member 10 isoform 2
[Homo sapiens]
Length = 543
Score = 110 bits (276), Expect = 9e-25
Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 9/227 (3%)
Query: 2 GGLRP---WSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACL 58
GGL+ W + V ++ L G +VF+ALE P + + E A F +H C+
Sbjct: 66 GGLQTVMKWKTVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDH-VCV 124
Query: 59 PPGALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPG 117
P LE L+ AL GVS +GNSS + WDL SA FA +++TT GYG++AP + G
Sbjct: 125 SPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEG 184
Query: 118 GKAFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHW---QLSPARAALLQAVAL 174
GK FC++YA G+P L+A + L + + A V + Q+S + ++ +
Sbjct: 185 GKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILF 244
Query: 175 GLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
L FV +PA++ ++G + L ++YF +L+T+G D + G
Sbjct: 245 ILAGCIVFVTIPAVIFKYIEG-WTALESIYFVVVTLTTVGFGDFVAG 290
>gi|10863961 potassium channel, subfamily K, member 10 isoform 1
[Homo sapiens]
Length = 538
Score = 110 bits (276), Expect = 9e-25
Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 9/227 (3%)
Query: 2 GGLRP---WSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACL 58
GGL+ W + V ++ L G +VF+ALE P + + E A F +H C+
Sbjct: 61 GGLQTVMKWKTVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDH-VCV 119
Query: 59 PPGALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPG 117
P LE L+ AL GVS +GNSS + WDL SA FA +++TT GYG++AP + G
Sbjct: 120 SPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEG 179
Query: 118 GKAFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHW---QLSPARAALLQAVAL 174
GK FC++YA G+P L+A + L + + A V + Q+S + ++ +
Sbjct: 180 GKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILF 239
Query: 175 GLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
L FV +PA++ ++G + L ++YF +L+T+G D + G
Sbjct: 240 ILAGCIVFVTIPAVIFKYIEG-WTALESIYFVVVTLTTVGFGDFVAG 285
>gi|205360983 potassium channel, subfamily K, member 16 isoform 3
[Homo sapiens]
Length = 294
Score = 107 bits (267), Expect = 1e-23
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALA 72
L++A++ L LGA +FQ LE + + + + E F E+ CL A+E+ + +
Sbjct: 17 LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRF-LENYTCLDQWAMEQFVQVIME 75
Query: 73 TQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPA 132
GV+ GNS+ WD S+ FA +++TT GYG++AP + G+ FC+ YA LG+P
Sbjct: 76 AWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPL 135
Query: 133 SLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGL-LVASSFVLL--PALV 189
+ V L H L R W+ P R+ +LQ + L L L + V+L P +V
Sbjct: 136 N---VIFLNH--LGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMV 190
Query: 190 LWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLH 227
++G S YF F +LSTIG D + G S H
Sbjct: 191 FSHVEG-WSFSEGFYFAFITLSTIGFGDYVVGTDPSKH 227
>gi|14149764 potassium channel, subfamily K, member 16 isoform 2
[Homo sapiens]
Length = 309
Score = 107 bits (267), Expect = 1e-23
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALA 72
L++A++ L LGA +FQ LE + + + + E F E+ CL A+E+ + +
Sbjct: 17 LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRF-LENYTCLDQWAMEQFVQVIME 75
Query: 73 TQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPA 132
GV+ GNS+ WD S+ FA +++TT GYG++AP + G+ FC+ YA LG+P
Sbjct: 76 AWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPL 135
Query: 133 SLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGL-LVASSFVLL--PALV 189
+ V L H L R W+ P R+ +LQ + L L L + V+L P +V
Sbjct: 136 N---VIFLNH--LGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMV 190
Query: 190 LWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLH 227
++G S YF F +LSTIG D + G S H
Sbjct: 191 FSHVEG-WSFSEGFYFAFITLSTIGFGDYVVGTDPSKH 227
>gi|205360973 potassium channel, subfamily K, member 16 isoform 4
[Homo sapiens]
Length = 262
Score = 105 bits (261), Expect = 5e-23
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALA 72
L++A++ L LGA +FQ LE + + + + E F E+ CL A+E+ + +
Sbjct: 17 LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRF-LENYTCLDQWAMEQFVQVIME 75
Query: 73 TQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPA 132
GV+ GNS+ WD S+ FA +++TT GYG++AP + G+ FC+ YA LG+P
Sbjct: 76 AWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPL 135
Query: 133 SLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGL-LVASSFVLL--PALV 189
+ V L H L R W+ P R+ +LQ + L L L + V+L P +V
Sbjct: 136 N---VIFLNH--LGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMV 190
Query: 190 LWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
++G S YF F +LSTIG D + G
Sbjct: 191 FSHVEG-WSFSEGFYFAFITLSTIGFGDYVVG 221
>gi|205360971 potassium channel, subfamily K, member 16 isoform 1
[Homo sapiens]
Length = 322
Score = 105 bits (261), Expect = 5e-23
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALA 72
L++A++ L LGA +FQ LE + + + + E F E+ CL A+E+ + +
Sbjct: 17 LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRF-LENYTCLDQWAMEQFVQVIME 75
Query: 73 TQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPA 132
GV+ GNS+ WD S+ FA +++TT GYG++AP + G+ FC+ YA LG+P
Sbjct: 76 AWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPL 135
Query: 133 SLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGL-LVASSFVLL--PALV 189
+ V L H L R W+ P R+ +LQ + L L L + V+L P +V
Sbjct: 136 N---VIFLNH--LGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVILIFPPMV 190
Query: 190 LWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
++G S YF F +LSTIG D + G
Sbjct: 191 FSHVEG-WSFSEGFYFAFITLSTIGFGDYVVG 221
>gi|17025230 potassium channel, subfamily K, member 17 isoform 1
[Homo sapiens]
Length = 332
Score = 94.4 bits (233), Expect = 9e-20
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
Query: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
Query: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
Query: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLAL 238
+ ++G S YF F +LST+G D + G S +++ ++L
Sbjct: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSL 247
>gi|205361107 potassium channel, subfamily K, member 17 isoform 2
[Homo sapiens]
Length = 271
Score = 91.7 bits (226), Expect = 6e-19
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
LL++A+L L LG VF LEG A + + ++ CL AL+ L+ +
Sbjct: 24 LLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKWEL-LQNFTCLDRPALDSLIRDVV 82
Query: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
+G S L N++ W+L + F+ S +TT GYG+++P + + FC+ +A +G+P
Sbjct: 83 QAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIP 142
Query: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ---AVALGLLVASSFVLLPAL 188
+L ++ L H + ++ + + WQ P +A L A+ GLL+ F+LLP L
Sbjct: 143 LNLVVLNRLGHLMQQGVNHWASRLGGTWQ-DPDKARWLAGSGALLSGLLL---FLLLPPL 198
Query: 189 VLWGLQGDCSLLGAVYFCFSSLSTIGLED 217
+ ++G S YF F +LST+G D
Sbjct: 199 LFSHMEG-WSYTEGFYFAFITLSTVGFGD 226
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 90.9 bits (224), Expect = 1e-18
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 23/253 (9%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP---GALEELLGT 69
L+ LL L GA+VF+ALE P + Q EL F H C+ G L + +
Sbjct: 9 LLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAH-PCVSDQELGLLIKEVAD 67
Query: 70 ALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALG 129
AL A + ++S WDL SA F+ +I+TT GYG++A + G+ FC+ YA +G
Sbjct: 68 ALGGGADPETNSTSNSSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVG 127
Query: 130 LPASLALVA--------TLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVASS 181
+P L+A +LRH + + + + + W + P +L A+ L+
Sbjct: 128 IPLFGILLAGVGDRLGSSLRHGIGHIEA-----IFLKWHVPPELVRVLSAMLFLLIGCLL 182
Query: 182 FVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGR-----GRSLHPVIYHLGQL 236
FVL P V ++ D S L A+YF +L+T+G D + G + P+++ L
Sbjct: 183 FVLTPTFVFCYME-DWSKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPAYQPLVWFWILL 241
Query: 237 ALLGKSSHLTACG 249
L +S LT G
Sbjct: 242 GLAYFASVLTTIG 254
>gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens]
Length = 330
Score = 87.4 bits (215), Expect = 1e-17
Identities = 72/225 (32%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 5 RPWSRYGLLVVAHLLALGLGAVVFQALEGPPAC---RLQAELRAELA---AFQAEHRACL 58
RP R LV+ L L +GA VF ALE RL + R L F AE
Sbjct: 3 RPSVRAAGLVLCTLCYLLVGAAVFDALESEAESGRQRLLVQKRGALRRKFGFSAED---- 58
Query: 59 PPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGG 118
EL AL + H GR W P + FA +++TT GYGH AP + G
Sbjct: 59 ----YRELERLALQAEPHRA--------GRQWKFPGSFYFAITVITTIGYGHAAPGTDSG 106
Query: 119 KAFCMVYAALGLPASLALVATLRHCLLPVLSR----PRAWVAVHWQLSPARAALLQAVAL 174
K FCM YA LG+P +L +L L V+ R + + + W + V
Sbjct: 107 KVFCMFYALLGIPLTLVTFQSLGERLNAVVRRLLLAAKCCLGLRWTC----VSTENLVVA 162
Query: 175 GLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLL 219
GLL ++ + L A+ +G + A Y+CF +L+TIG D +
Sbjct: 163 GLLACAATLALGAVAFSHFEG-WTFFHAYYYCFITLTTIGFGDFV 206
>gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens]
Length = 394
Score = 83.6 bits (205), Expect = 2e-16
Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALA 72
L+V L +GA VF ALE P L R EL + R L G EEL L
Sbjct: 11 LIVCTFTYLLVGAAVFDALESEP--ELIERQRLELRQQELRARYNLSQGGYEELERVVLR 68
Query: 73 TQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPA 132
+ H G W + FA +++TT GYGH AP + GGK FCM YA LG+P
Sbjct: 69 LKPH--------KAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPL 120
Query: 133 SLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVASSFVLLPALVLWG 192
+L + +L + ++ + A ++ V +G S + + A
Sbjct: 121 TLVMFQSLGERINTLVRYLLHRAKKGLGMRRADVSMANMVLIGFFSCISTLCIGAAAFSH 180
Query: 193 LQGDCSLLGAVYFCFSSLSTIGLED 217
+ + A Y+CF +L+TIG D
Sbjct: 181 YE-HWTFFQAYYYCFITLTTIGFGD 204
>gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens]
Length = 499
Score = 80.9 bits (198), Expect = 1e-15
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 12 LLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTAL 71
LL A + L +GA +F+ LE P + + E CL L+++L
Sbjct: 7 LLTSAIIFYLAIGAAIFEVLEEPHWKEAKKNYYTQKLHLLKEF-PCLGQEGLDKILEVVS 65
Query: 72 ATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLP 131
GV+ GN + W+ P+A++FAA+++TT GYG++AP +P G+ FC+ Y G+P
Sbjct: 66 DAAGQGVAITGNQTFNN-WNWPNAMIFAATVITTIGYGNVAPKTPAGRLFCVFYGLFGVP 124
Query: 132 ASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVASSFVLLPALVLW 191
L ++ L R ++ +S +A + V + +++P V
Sbjct: 125 LCLTWISALGKFFGGRAKRLGQFLTKR-GVSLRKAQITCTVIFIVWGVLVHLVIPPFVFM 183
Query: 192 GLQGDCSLLGAVYFCFSSLSTIGLEDLLPG 221
+G + + +Y+ F ++STIG D + G
Sbjct: 184 VTEG-WNYIEGLYYSFITISTIGFGDFVAG 212
>gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens]
Length = 374
Score = 75.1 bits (183), Expect = 6e-14
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
Query: 13 LVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLGTALA 72
L+V L +GA VF ALE R + +L+AE + ++ EL+ L
Sbjct: 11 LIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYRQLELV--ILQ 68
Query: 73 TQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPA 132
++ H G W + FA +++TT GYGH AP + GKAFCM YA LG+P
Sbjct: 69 SEPHRA--------GVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL 120
Query: 133 SLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVASSFVLLPALVLWG 192
+L + +L + + + + ++ V +G + + A
Sbjct: 121 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ 180
Query: 193 LQGDCSLLGAVYFCFSSLSTIGLED 217
+ + S A Y+CF +L+TIG D
Sbjct: 181 CE-EWSFFHAYYYCFITLTTIGFGD 204
>gi|11545761 potassium channel, subfamily K, member 12 [Homo
sapiens]
Length = 430
Score = 69.3 bits (168), Expect = 3e-12
Identities = 69/258 (26%), Positives = 99/258 (38%), Gaps = 38/258 (14%)
Query: 9 RYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELLG 68
R+ LL L L GA VF ALE P +A A L F A H P L L
Sbjct: 38 RFVLLAALIGLYLVAGATVFSALESPGEAEARARWGATLRNFSAAHGVAEPE--LRAFLR 95
Query: 69 TALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAAL 128
A A GV + WD P A F ++++T G+G P + GGKAF + Y
Sbjct: 96 HYEAALAAGVRA---DALRPRWDFPGAFYFVGTVVSTIGFGMTTPATVGGKAFLIAYGLF 152
Query: 129 GLPASL------------ALVATLRHC---------LLPVLSR-----PRAWVAVHWQLS 162
G ++ L +R C LLP R A W+ S
Sbjct: 153 GCAGTILFFNLFLERIISLLAFIMRACRERQLRRSGLLPATFRRGSALSEADSLAGWKPS 212
Query: 163 PARAALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGR 222
L+ + LL + + ++ W + ++YFCF + STIG DL+ +
Sbjct: 213 VYHVLLILGLFAVLLSCCASAMYTSVEGW------DYVDSLYFCFVTFSTIGFGDLVSSQ 266
Query: 223 GRSL-HPVIYHLGQLALL 239
+ + +Y LG +
Sbjct: 267 HAAYRNQGLYRLGNFLFI 284
>gi|16306555 potassium channel, subfamily K, member 13 [Homo
sapiens]
Length = 408
Score = 53.9 bits (128), Expect = 1e-07
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 29/234 (12%)
Query: 8 SRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPPGALEELL 67
+R+ LL +L L GA VF ALE + + LA F H + +EL
Sbjct: 18 ARFLLLAALIVLYLLGGAAVFSALELAHERQAKQRWEERLANFSRGHNL-----SRDELR 72
Query: 68 GTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAA 127
G + + + + WD A F ++++T G+G P + GGK F + Y
Sbjct: 73 GFLRHYEEATRAGIRVDNVRPRWDFTGAFYFVGTVVSTIGFGMTTPATVGGKIFLIFYGL 132
Query: 128 LGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQA---------------- 171
+G +++ L+ +++ + H + R AL Q
Sbjct: 133 VGCSSTILFFNLFLERLITIIA--YIMKSCHQRQLRRRGALPQESLKDAGQCEVDSLAGW 190
Query: 172 ------VALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLL 219
V L L AS + A ++ S ++YFCF + STIG DL+
Sbjct: 191 KPSVYYVMLILCTASILISCCASAMYTPIEGWSYFDSLYFCFVAFSTIGFGDLV 244
>gi|32469495 potassium channel, subfamily K, member 18 [Homo
sapiens]
Length = 384
Score = 47.4 bits (111), Expect = 1e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 90 WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLS 149
W S+L F ++ +T GYG++ P++ GK CM+YA G+P ++ L +LS
Sbjct: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILS 160
>gi|170650615 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 36.2 bits (82), Expect = 0.029
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 7 WS-RYGLLVVAHLLALGLGAVVFQALEGPPAC--RLQAELRAELA----AFQAEHR-ACL 58
WS R GL ++ L L + L G P C LQAE R +++ + +A+H + +
Sbjct: 227 WSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAI 286
Query: 59 PPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGG 118
P L ELL A A +S + S L + + L G+GH+ P S
Sbjct: 287 PASVLSELLPAEAAPLARALSAITAVSVAVV-----NLQYQGAHLPVQGFGHLVPSSEDP 341
Query: 119 KAFCMVYAALGLP 131
+VY ++ P
Sbjct: 342 GVLGIVYDSVAFP 354
>gi|4506001 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 36.2 bits (82), Expect = 0.029
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 7 WS-RYGLLVVAHLLALGLGAVVFQALEGPPAC--RLQAELRAELA----AFQAEHR-ACL 58
WS R GL ++ L L + L G P C LQAE R +++ + +A+H + +
Sbjct: 227 WSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAI 286
Query: 59 PPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGG 118
P L ELL A A +S + S L + + L G+GH+ P S
Sbjct: 287 PASVLSELLPAEAAPLARALSAITAVSVAVV-----NLQYQGAHLPVQGFGHLVPSSEDP 341
Query: 119 KAFCMVYAALGLP 131
+VY ++ P
Sbjct: 342 GVLGIVYDSVAFP 354
>gi|5031819 potassium voltage-gated channel, shaker-related
subfamily, member 10 [Homo sapiens]
Length = 511
Score = 34.3 bits (77), Expect = 0.11
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 92 LPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGL 130
+P +A +TT GYG M P +PGGK + A G+
Sbjct: 408 IPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGV 446
>gi|25952092 potassium voltage-gated channel, shaker-related
subfamily, member 7 [Homo sapiens]
Length = 456
Score = 33.5 bits (75), Expect = 0.19
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 92 LPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGL 130
+P + +A +TT GYG MAP++ GGK + A G+
Sbjct: 345 IPESFWWAVVTMTTVGYGDMAPVTVGGKIVGSLCAIAGV 383
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,495,452
Number of Sequences: 37866
Number of extensions: 465312
Number of successful extensions: 1588
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1468
Number of HSP's gapped (non-prelim): 81
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.