Guide to the Human Genome
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Name: PPOX Sequence: fasta or formatted (477aa) NCBI GI: 4506001
Description:

protoporphyrinogen oxidase

Referenced in:

Heme

Other entries for this name:
alt mRNA [477aa] protoporphyrinogen oxidase
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         48           3
 C cysteine            1.7          8           1
 D aspartate           2.3         11           1
 E glutamate           5.9         28           1
 F phenylalanine       2.5         12           1
 G glycine            10.3         49           3
 H histidine           2.9         14           1
 I isoleucine          2.7         13           1
 K lysine              1.7          8           1
 L leucine            14.7         70           3
 M methionine          1.0          5           1
 N asparagine          1.5          7           1
 P proline             7.1         34           2
 Q glutamine           5.0         24           2
 R arginine            7.1         34           2
 S serine              9.4         45           2
 T threonine           3.6         17           1
 V valine              7.8         37           3
 W tryptophan          1.5          7           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protoporphyrinogen oxidase 
PPOX                  1.000   protoporphyrinogen oxidase 
MAOB                  0.018   monoamine oxidase B 
PAOX                  0.016   polyamine oxidase isoform 4 
PAOX                  0.016   polyamine oxidase isoform 2 
PAOX                  0.016   polyamine oxidase isoform 1 
MAOA                  0.015   monoamine oxidase A 
IL4I1                 0.012   interleukin 4 induced 1 isoform 1 precursor 
IL4I1                 0.012   interleukin 4 induced 1 isoform 2 
KCNK7                 0.012   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.012   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.012   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.012   potassium channel, subfamily K, member 7 isoform B [...
RETSAT                0.010   all-trans-13,14-dihydroretinol saturase 
SMOX                  0.009   spermine oxidase isoform 4 
SMOX                  0.009   spermine oxidase isoform 3 
SMOX                  0.009   spermine oxidase isoform 2 
SMOX                  0.009   spermine oxidase isoform 1 
KDM1                  0.009   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.009   amine oxidase (flavin containing) domain 2 isoform b...
DMGDH                 0.008   dimethylglycine dehydrogenase precursor 
GPR68                 0.008   G protein-coupled receptor 68 
PDPR                  0.007   pyruvate dehydrogenase phosphatase regulatory subun...
LOC100287558          0.007   PREDICTED: hypothetical protein XP_002343325 
SON                   0.005   SON DNA-binding protein isoform F 
SON                   0.005   SON DNA-binding protein isoform B 
FAR2                  0.005   fatty acyl CoA reductase 2 
TCF7L2                0.005   transcription factor 7-like 2 isoform 1 
TCF7L2                0.005   transcription factor 7-like 2 isoform 2 
TCF7L2                0.005   transcription factor 7-like 2 isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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