Guide to the Human Genome
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Name: NR0B1 Sequence: fasta or formatted (470aa) NCBI GI: 5016090
Description:

nuclear receptor subfamily 0, group B, member 1

Referenced in:

Adrenals
Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         41           2
 C cysteine            4.9         23           2
 D aspartate           3.0         14           2
 E glutamate           5.3         25           2
 F phenylalanine       3.0         14           2
 G glycine             8.3         39           2
 H histidine           2.1         10           2
 I isoleucine          3.0         14           2
 K lysine              3.6         17           1
 L leucine            11.5         54           2
 M methionine          2.3         11           2
 N asparagine          2.3         11           1
 P proline             7.7         36           2
 Q glutamine           6.2         29           2
 R arginine            6.2         29           3
 S serine              6.4         30           2
 T threonine           5.5         26           2
 V valine              5.1         24           2
 W tryptophan          2.1         10           2
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor subfamily 0, group B, member 1 [Homo... 
NR0B2                 0.127   short heterodimer partner 
NR2F6                 0.070   nuclear receptor subfamily 2, group F, member 6 [Hom...
NR2C2                 0.062   nuclear receptor subfamily 2, group C, member 2 [Hom...
NR2E3                 0.059   photoreceptor-specific nuclear receptor isoform b [Ho...
NR2F2                 0.056   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.056   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.056   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.056   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F1                 0.054   nuclear receptor subfamily 2, group F, member 1 [Homo...
HNF4A                 0.046   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.046   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.046   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.046   hepatocyte nuclear factor 4 alpha isoform f 
HNF4A                 0.046   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.046   hepatocyte nuclear factor 4 alpha isoform d 
NR2C1                 0.044   nuclear receptor subfamily 2, group C, member 1 iso...
RXRB                  0.043   retinoid X receptor, beta 
RXRA                  0.042   retinoid X receptor, alpha 
HNF4G                 0.042   hepatocyte nuclear factor 4, gamma 
RXRG                  0.041   retinoid X receptor, gamma isoform a 
NR5A2                 0.036   nuclear receptor subfamily 5, group A, member 2 isof...
NR5A2                 0.036   nuclear receptor subfamily 5, group A, member 2 isofo...
NR2E3                 0.035   photoreceptor-specific nuclear receptor isoform a [Ho...
NR2E1                 0.034   nuclear receptor subfamily 2, group E, member 1 [Homo...
ESRRG                 0.030   estrogen-related receptor gamma isoform 2 
ESRRG                 0.030   estrogen-related receptor gamma isoform 2 
ESRRG                 0.030   estrogen-related receptor gamma isoform 1 
ESRRG                 0.030   estrogen-related receptor gamma isoform 2 
ESRRB                 0.024   estrogen-related receptor beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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