Guide to the Human Genome
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Search of human proteins with 49533617

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|49533617 sterol O-acyltransferase 1 [Homo sapiens]
         (550 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|49533617 sterol O-acyltransferase 1 [Homo sapiens]                1135   0.0  
gi|4507147 acyl-CoA:cholesterol acyltransferase 2 [Homo sapiens]      504   e-142
gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens]        123   4e-28
gi|41352705 kinesin family member 3C [Homo sapiens]                    34   0.40 
gi|12025678 actinin, alpha 4 [Homo sapiens]                            33   0.68 
gi|170784809 kinesin family member 17 isoform b [Homo sapiens]         33   0.68 
gi|170784807 kinesin family member 17 isoform a [Homo sapiens]         33   0.68 
gi|4757902 caltractin [Homo sapiens]                                   33   0.88 
gi|98986325 dual oxidase activator 2 [Homo sapiens]                    32   1.2  
gi|154426306 kinesin family member 24 [Homo sapiens]                   32   1.2  
gi|7661878 kinesin family member 14 [Homo sapiens]                     32   1.5  
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]                 32   1.5  
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]                 32   1.5  
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]                   32   1.5  
gi|7657655 translocation associated membrane protein 1 [Homo sap...    32   2.0  
gi|163838631 retinoblastoma-associated protein 140 isoform a [Ho...    31   2.6  
gi|6912450 translocation-associated membrane protein 2 [Homo sap...    31   3.4  
gi|4758646 kinesin family member 3B [Homo sapiens]                     30   4.4  
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]                       30   4.4  
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]                        30   4.4  
gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]       30   4.4  
gi|5032213 solute carrier family 35, member B1 [Homo sapiens]          30   4.4  
gi|188497637 cell division cycle associated 7-like isoform 3 [Ho...    30   7.5  
gi|188497635 cell division cycle associated 7-like isoform 2 [Ho...    30   7.5  
gi|31542537 cell division cycle associated 7-like isoform 1 [Hom...    30   7.5  
gi|192455698 glutathione peroxidase 8 [Homo sapiens]                   29   9.8  
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]       29   9.8  
gi|21735483 transient receptor potential cation channel, subfami...    29   9.8  
gi|21553331 solute carrier family 2 (facilitated glucose transpo...    29   9.8  
gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens]    29   9.8  

>gi|49533617 sterol O-acyltransferase 1 [Homo sapiens]
          Length = 550

 Score = 1135 bits (2937), Expect = 0.0
 Identities = 550/550 (100%), Positives = 550/550 (100%)

Query: 1   MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE 60
           MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE
Sbjct: 1   MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE 60

Query: 61  LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK 120
           LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK
Sbjct: 61  LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK 120

Query: 121 IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK 180
           IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK
Sbjct: 121 IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK 180

Query: 181 FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT 240
           FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT
Sbjct: 181 FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT 240

Query: 241 YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF 300
           YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF
Sbjct: 241 YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF 300

Query: 301 LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR 360
           LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR
Sbjct: 301 LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR 360

Query: 361 VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW 420
           VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW
Sbjct: 361 VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW 420

Query: 421 NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM 480
           NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM
Sbjct: 421 NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM 480

Query: 481 FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR 540
           FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR
Sbjct: 481 FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR 540

Query: 541 PRSWTCRYVF 550
           PRSWTCRYVF
Sbjct: 541 PRSWTCRYVF 550


>gi|4507147 acyl-CoA:cholesterol acyltransferase 2 [Homo sapiens]
          Length = 522

 Score =  504 bits (1297), Expect = e-142
 Identities = 239/427 (55%), Positives = 296/427 (69%), Gaps = 8/427 (1%)

Query: 120 KIFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFG 179
           K+FI R+SLLDEL+EV H RTIYHMFIA L +FI+STL +D+IDEGRL+LEF LL ++FG
Sbjct: 102 KVFIIRKSLLDELMEVQHFRTIYHMFIAGLCVFIISTLAIDFIDEGRLLLEFDLLIFSFG 161

Query: 180 KFPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGP 239
           + P  + TW  MFLST   PY   + WA G    +  L      G   +     VL   P
Sbjct: 162 QLPLALVTWVPMFLSTLLAPYQALRLWARGTWTQATGL------GCALLAAHAVVLCALP 215

Query: 240 TYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLY 299
            +V + + LPPASR +++FEQ+RF+MK++SF+RE VP  L + + +   +  P+ + YLY
Sbjct: 216 VHVAVEHQLPPASRCVLVFEQVRFLMKSYSFLREAVPGTLRARRGEG--IQAPSFSSYLY 273

Query: 300 FLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSA 359
           FLF PTLIYR++YPR P VRW YVA  FAQ  GC  Y  +I  RLC P+F N+ +EPFS 
Sbjct: 274 FLFCPTLIYRETYPRTPYVRWNYVAKNFAQALGCVLYACFILGRLCVPVFANMSREPFST 333

Query: 360 RVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRT 419
           R LVL + ++ LPG+ +L L FFAFLHCWLNAFAEMLRFGDRMFY+DWWNSTS+SNYYRT
Sbjct: 334 RALVLSILHATLPGIFMLLLIFFAFLHCWLNAFAEMLRFGDRMFYRDWWNSTSFSNYYRT 393

Query: 420 WNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLF 479
           WNVVVHDWLY Y Y+D L     R +  AML VF VSAV HEY     L FFYPV+ +LF
Sbjct: 394 WNVVVHDWLYSYVYQDGLRLLGARARGVAMLGVFLVSAVAHEYIFCFVLGFFYPVMLILF 453

Query: 480 MFFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYV 539
           +  G   NF+++D R  P WNVLMWT LFLG G+ +  Y QEWYAR+HCPL   TF   V
Sbjct: 454 LVIGGMLNFMMHDQRTGPAWNVLMWTMLFLGQGIQVSLYCQEWYARRHCPLPQATFWGLV 513

Query: 540 RPRSWTC 546
            PRSW+C
Sbjct: 514 TPRSWSC 520


>gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens]
          Length = 488

 Score =  123 bits (309), Expect = 4e-28
 Identities = 91/316 (28%), Positives = 146/316 (46%), Gaps = 39/316 (12%)

Query: 234 VLGFGPTYVVLAYTLPPASRFI------IIFEQIRFVMKAHSFVRENVPRVLNSAKEKSS 287
           +L F    V+L  ++ P    +      I+F ++      +S+ R    +  ++ K+ SS
Sbjct: 175 ILCFPAAVVLLVESITPVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASS 234

Query: 288 -----TVPIP---TVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYY 339
                TV  P   T     YFLFAPTL Y  ++PR+P +R  ++  +  ++         
Sbjct: 235 AAAPHTVSYPDNLTYRDLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEMLFFTQLQVG 294

Query: 340 IFERLCAPLFRNIKQEPFS--------ARVLVLCVFNSILPGVLILFLTFFAFLHCWLNA 391
           + ++   P  +N   +PF          R+L L V     P  LI  + F+   H  LNA
Sbjct: 295 LIQQWMVPTIQN-SMKPFKDMDYSRIIERLLKLAV-----PNHLIWLIFFYWLFHSCLNA 348

Query: 392 FAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLA 451
            AE+++FGDR FY+DWWNS S + +++ WN+ VH W   + YK  L   S ++   A   
Sbjct: 349 VAELMQFGDREFYRDWWNSESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKW--MARTG 406

Query: 452 VFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGM----AFNFIVNDSRKKPIWNVLMWTSL 507
           VF  SA  HEY ++V L      +F L+ F GM       + V    +    N  +W SL
Sbjct: 407 VFLASAFFHEYLVSVPLR-----MFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSL 461

Query: 508 FLGNGVLLCFYSQEWY 523
            +G  + +  Y  ++Y
Sbjct: 462 IIGQPIAVLMYVHDYY 477


>gi|41352705 kinesin family member 3C [Homo sapiens]
          Length = 793

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 195 TFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRF 254
           TF   Y      A  Y ++  PLI S+  GF   +F  G  G G TY +    + P  R 
Sbjct: 59  TFDAVYDASSKQADLYDETVRPLIDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVEPELRG 118

Query: 255 II--IFEQI 261
           +I   FE I
Sbjct: 119 VIPNAFEHI 127


>gi|12025678 actinin, alpha 4 [Homo sapiens]
          Length = 911

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 73  FDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLR--APPEQGKIFIAR 125
           F  F+  +  ++   D     + +F VL G+KN   A++LR   PP+Q +  IAR
Sbjct: 828 FQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIAR 882


>gi|170784809 kinesin family member 17 isoform b [Homo sapiens]
          Length = 1028

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 210 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFII------IFEQIRF 263
           Y++ ++PL+  +  G+   IF  G  G G ++ +     PP+ R II      +FE ++ 
Sbjct: 68  YNEIAYPLVEGVTEGYNGTIFAYGQTGSGKSFTMQGLPDPPSQRGIIPRAFEHVFESVQC 127

Query: 264 VMKAHSFVRENVPRVLN 280
                  VR +   + N
Sbjct: 128 AENTKFLVRASYLEIYN 144


>gi|170784807 kinesin family member 17 isoform a [Homo sapiens]
          Length = 1029

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 210 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFII------IFEQIRF 263
           Y++ ++PL+  +  G+   IF  G  G G ++ +     PP+ R II      +FE ++ 
Sbjct: 68  YNEIAYPLVEGVTEGYNGTIFAYGQTGSGKSFTMQGLPDPPSQRGIIPRAFEHVFESVQC 127

Query: 264 VMKAHSFVRENVPRVLN 280
                  VR +   + N
Sbjct: 128 AENTKFLVRASYLEIYN 144


>gi|4757902 caltractin [Homo sapiens]
          Length = 172

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 13/107 (12%)

Query: 8   SLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEELKPFFMK 67
           S R R+S   E  EE + +   A +  +    G ID+K+L   K+ + A   E K   +K
Sbjct: 14  SQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKEL---KVAMRALGFEPKKEEIK 70

Query: 68  EVGS----------HFDDFVTNLIEKSASLDNGGCALTTFSVLEGEK 104
           ++ S          +F DF+T + +K +  D     L  F + + ++
Sbjct: 71  KMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDE 117


>gi|98986325 dual oxidase activator 2 [Homo sapiens]
          Length = 320

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 470 FFYPVLFVLFMFFGMAFNFIVN----DSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWY 523
           F  P+L V+ +F  +A +F++         +  W V +  SLF+G  ++   +S EW+
Sbjct: 20  FSVPLLIVILVFLALAASFLLILPGIRGHSRWFWLVRVLLSLFIGAEIVAVHFSAEWF 77


>gi|154426306 kinesin family member 24 [Homo sapiens]
          Length = 1368

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 210 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVL 244
           Y K++HPLI+ +F+G     F  G  G G TY ++
Sbjct: 290 YMKTTHPLIQHIFNGGNATCFAYGQTGAGKTYTMI 324


>gi|7661878 kinesin family member 14 [Homo sapiens]
          Length = 1648

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 199 PYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPP 250
           P++  Q   T Y K + PL+   F GF   +F  G  G G +Y ++ ++  P
Sbjct: 415 PHYASQ--TTVYEKLAAPLLERAFEGFNTCLFAYGQTGSGKSYTMMGFSEEP 464


>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
          Length = 887

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 73  FDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLR--APPEQGKIFIAR 125
           F  F+  +  ++A  D     + +F +L G+KN     +LR   PP+Q +  IAR
Sbjct: 804 FQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQAEYCIAR 858


>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
          Length = 914

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 73  FDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLR--APPEQGKIFIAR 125
           F  F+  +  ++A  D     + +F +L G+KN     +LR   PP+Q +  IAR
Sbjct: 831 FQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQAEYCIAR 885


>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
          Length = 892

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 73  FDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLR--APPEQGKIFIAR 125
           F  F+  +  ++A  D     + +F +L G+KN     +LR   PP+Q +  IAR
Sbjct: 809 FQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQAEYCIAR 863


>gi|7657655 translocation associated membrane protein 1 [Homo
           sapiens]
          Length = 374

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 299 YFLFAPT----LIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCA---PLFRN 351
           ++LFA      ++  ++Y  +PT+ W             FFY+  +   L A     F+ 
Sbjct: 128 FYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAFPELYFQK 187

Query: 352 IKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNST 411
            K+E    +++ + ++   + G  +L L     +   L+ F E L    R+FY   +++ 
Sbjct: 188 TKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFY---FSNE 244

Query: 412 SYSNYYRTWNVV 423
            Y   +  W V+
Sbjct: 245 KYQKGFSLWAVL 256


>gi|163838631 retinoblastoma-associated protein 140 isoform a [Homo
           sapiens]
          Length = 1512

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 491 NDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLD 537
           N  R    +N  +W    L  G LLC+ S     R   P+K P  LD
Sbjct: 346 NTDRNIDKYNYTLWKGQLLNKGKLLCYISLRSATRAFLPIKLPEKLD 392


>gi|6912450 translocation-associated membrane protein 2 [Homo
           sapiens]
          Length = 370

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 47/226 (20%), Positives = 84/226 (37%), Gaps = 20/226 (8%)

Query: 196 FSVPYFLFQHWATGYSKSSHPLIRSLFH-----GFLFMIFQIGVLGFGPTYVVLAYTLPP 250
           FS  + +  H   G+      LI  +F       FLF++ Q  +         + Y   P
Sbjct: 13  FSQEFVIHNHADIGFCLVLCVLIGLMFEVTAKTAFLFILPQYNISVPTADSETVHYHYGP 72

Query: 251 ASRFIIIFEQIRFVMKAHSFVRE----NVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTL 306
                I+F  I   +  H+ V+E     + + L+ +K K S        Q + F F   +
Sbjct: 73  KDLVTILF-YIFITIILHAVVQEYILDKISKRLHLSKVKHSK--FNESGQLVVFHFTSVI 129

Query: 307 -----IYRDSYPRNPTVRWG---YVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFS 358
                +  + Y  NP   W    +V + F   F     + Y    L    F+ +++E   
Sbjct: 130 WCFYVVVTEGYLTNPRSLWEDYPHVHLPFQVKFFYLCQLAYWLHALPELYFQKVRKEEIP 189

Query: 359 ARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFY 404
            ++  +C++   + G  +L L+    +   L    E L    R+FY
Sbjct: 190 RQLQYICLYLVHIAGAYLLNLSRLGLILLLLQYSTEFLFHTARLFY 235


>gi|4758646 kinesin family member 3B [Homo sapiens]
          Length = 747

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)

Query: 210 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFII 256
           Y ++  PL+ S+  GF   IF  G  G G TY +      P  R +I
Sbjct: 73  YDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVI 119


>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
          Length = 532

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)

Query: 10  RNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAE-AEELKPFF--- 65
           +N    + EN +ED+++    +E  E P  G I   Q+  +KIK   E  EE+K F    
Sbjct: 168 KNDWRDAEENKKEDKEKE---EEEEEKPKRGSIGENQIKDEKIKKDKEPKEEVKSFMDRK 224

Query: 66  --MKEVGSHFDDFVTNLIEKSASLDN--GGCALTTFSVLEGEKNNHRAKDL 112
               EV S   +F+T+ ++ + +  +  GG A       EG       K L
Sbjct: 225 KGFTEVKSQNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRL 275


>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
          Length = 538

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)

Query: 10  RNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAE-AEELKPFF--- 65
           +N    + EN +ED+++    +E  E P  G I   Q+  +KIK   E  EE+K F    
Sbjct: 174 KNDWRDAEENKKEDKEKE---EEEEEKPKRGSIGENQIKDEKIKKDKEPKEEVKSFMDRK 230

Query: 66  --MKEVGSHFDDFVTNLIEKSASLDN--GGCALTTFSVLEGEKNNHRAKDL 112
               EV S   +F+T+ ++ + +  +  GG A       EG       K L
Sbjct: 231 KGFTEVKSQNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRL 281


>gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]
          Length = 554

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 45/182 (24%)

Query: 348 LFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDW 407
           LFR+  QEP   R L L + + +  G + L L+                   DR+F+  W
Sbjct: 243 LFRHFCQEP---RKLDLILHHFLPVGFVTLSLSLMI----------------DRIFFGQW 283

Query: 408 WNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRF--------------------KSA 447
              T     +  +NV+  +W  +Y    + W+FS+ F                    +  
Sbjct: 284 ---TLVQFNFLKFNVL-QNWGTFYGSHPWHWYFSQGFPVILGTHLPFFIHGCYLAPKRYR 339

Query: 448 AMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSL 507
            +L     + +V+         F YPVL    +F G +   +   + KKP  + L  ++L
Sbjct: 340 ILLVTVLWTLLVYSMLSHKEFRFIYPVLPFCMVFCGYSLTHL--KTWKKPALSFLFLSNL 397

Query: 508 FL 509
           FL
Sbjct: 398 FL 399


>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
          Length = 322

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 327 FAQVFGCFFYVYYIFERLCAPLF-RNIKQEPFS---ARVLVLCVFNSILPGVLILF 378
           F  VF C+FY   + E++    +    KQE F+     V + CV N++   +LI F
Sbjct: 18  FLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQF 73


>gi|188497637 cell division cycle associated 7-like isoform 3 [Homo
           sapiens]
          Length = 408

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/62 (25%), Positives = 29/62 (46%)

Query: 4   EEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEELKP 63
           E K   R  + +     E ++D R+ ++ES +      ++IK+  A   +L AE   +  
Sbjct: 135 ERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPD 194

Query: 64  FF 65
           FF
Sbjct: 195 FF 196


>gi|188497635 cell division cycle associated 7-like isoform 2 [Homo
           sapiens]
          Length = 420

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/62 (25%), Positives = 29/62 (46%)

Query: 4   EEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEELKP 63
           E K   R  + +     E ++D R+ ++ES +      ++IK+  A   +L AE   +  
Sbjct: 147 ERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPD 206

Query: 64  FF 65
           FF
Sbjct: 207 FF 208


>gi|31542537 cell division cycle associated 7-like isoform 1 [Homo
           sapiens]
          Length = 454

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/62 (25%), Positives = 29/62 (46%)

Query: 4   EEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEELKP 63
           E K   R  + +     E ++D R+ ++ES +      ++IK+  A   +L AE   +  
Sbjct: 181 ERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPD 240

Query: 64  FF 65
           FF
Sbjct: 241 FF 242


>gi|192455698 glutathione peroxidase 8 [Homo sapiens]
          Length = 209

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 485 AFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQE 521
           AF F+V+ S+K+P WN   W  L    G ++ F+  E
Sbjct: 150 AFRFLVDSSKKEPRWN--FWKYLVNPEGQVVKFWKPE 184


>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
          Length = 857

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 19  NPEEDEDQRNPAKESLETPSNGRIDIKQLIAK 50
           N E +E+   PAKE  +TP  G I  K+   K
Sbjct: 385 NVESEEENEKPAKEQRQTPGKGLISGKERAGK 416


>gi|21735483 transient receptor potential cation channel, subfamily
           V, member 3 [Homo sapiens]
          Length = 790

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 20/88 (22%)

Query: 422 VVVHDWLYYYAYKDFL----------W----FFSKRFKSAAMLAVFAVSAVVHEYALAVC 467
           V++  +LY +AYK++L          W    ++++ F+S  M +V     ++H+      
Sbjct: 533 VILSVFLYLFAYKEYLACLVLAMALGWANMLYYTRGFQSMGMYSVMIQKVILHD-----V 587

Query: 468 LSFFYPVLFVLFMFFGMAFNFIVNDSRK 495
           L F + V  V  + FG+A   ++    K
Sbjct: 588 LKFLF-VYIVFLLGFGVALASLIEKCPK 614


>gi|21553331 solute carrier family 2 (facilitated glucose
           transporter), member 12 [Homo sapiens]
          Length = 617

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 30/158 (18%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 220 SLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVL 279
           ++FHG+ +M     V+  G    +  Y LPP+ RF+++  Q     K    +     R L
Sbjct: 191 NVFHGWKYMFGL--VIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRL-----RAL 243

Query: 280 NSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYY 339
           +   E+ + +     ++Y Y  +    ++R        +  G   + F Q+ G    ++Y
Sbjct: 244 SDTTEELTVIKSSLKDEYQYSFWD---LFRSKDNMRTRIMIGLTLVFFVQITGQPNILFY 300

Query: 340 IFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLIL 377
               L +  F++ +    ++  + +    S +P  L++
Sbjct: 301 ASTVLKSVGFQSNEAASLASTGVGVVKVISTIPATLLV 338


>gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens]
          Length = 491

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 13  LSKSRENPE--EDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEELKPFFMKEVG 70
           +SK+   PE  E   +R+   +++ T       + +L A+K K  A+   L  F      
Sbjct: 222 VSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASF------ 275

Query: 71  SHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKN 105
               DF   L   + ++  G CAL TF   E ++N
Sbjct: 276 -DHCDFPELLSPSNVAIYGGLCALATFDRQELQRN 309


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.142    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,892,186
Number of Sequences: 37866
Number of extensions: 836666
Number of successful extensions: 3137
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3112
Number of HSP's gapped (non-prelim): 38
length of query: 550
length of database: 18,247,518
effective HSP length: 107
effective length of query: 443
effective length of database: 14,195,856
effective search space: 6288764208
effective search space used: 6288764208
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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