Guide to the Human Genome
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Name: TRAM2 Sequence: fasta or formatted (370aa) NCBI GI: 6912450
Description:

translocation-associated membrane protein 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         26           2
 C cysteine            2.2          8           1
 D aspartate           1.9          7           1
 E glutamate           5.4         20           2
 F phenylalanine       7.8         29           2
 G glycine             3.8         14           1
 H histidine           4.3         16           1
 I isoleucine          5.7         21           2
 K lysine              5.1         19           2
 L leucine            14.1         52           4
 M methionine          1.1          4           1
 N asparagine          3.5         13           2
 P proline             4.1         15           1
 Q glutamine           3.8         14           1
 R arginine            5.7         21           3
 S serine              4.9         18           1
 T threonine           4.9         18           1
 V valine              7.6         28           3
 W tryptophan          2.2          8           1
 Y tyrosine            5.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocation-associated membrane protein 2 
TRAM1                 0.507   translocation associated membrane protein 1 
TRAM1L1               0.399   translocation associated membrane protein 1-like 1 ...
LASS4                 0.050   LAG1 homolog, ceramide synthase 4 
LASS2                 0.048   LAG1 longevity assurance 2 
LASS2                 0.048   LAG1 longevity assurance 2 
LASS6                 0.039   longevity assurance homolog 6 
LASS5                 0.034   LAG1 homolog, ceramide synthase 5 
LASS1                 0.023   LAG1 homolog, ceramide synthase 1 isoform 2 
LASS1                 0.023   LAG1 homolog, ceramide synthase 1 isoform 1 
LASS3                 0.020   LAG1 longevity assurance homolog 3 
SEMA6D                0.010   semaphorin 6D isoform 1 precursor 
SEMA6D                0.010   semaphorin 6D isoform 4 precursor 
SEMA6D                0.010   semaphorin 6D isoform 3 precursor 
SEMA6D                0.010   semaphorin 6D isoform 2 precursor 
SOAT1                 0.008   sterol O-acyltransferase 1 
C21orf66              0.005   GC-rich sequence DNA-binding factor candidate isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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