Guide to the Human Genome
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Name: SOAT2 Sequence: fasta or formatted (522aa) NCBI GI: 4507147
Description:

acyl-CoA:cholesterol acyltransferase 2

Referenced in:

Bile Acids and Other Cholesterol Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         42           2
 C cysteine            2.7         14           1
 D aspartate           2.5         13           1
 E glutamate           4.4         23           1
 F phenylalanine       6.9         36           2
 G glycine             6.5         34           2
 H histidine           2.7         14           1
 I isoleucine          3.8         20           2
 K lysine              1.3          7           1
 L leucine            14.2         74           3
 M methionine          3.4         18           2
 N asparagine          1.9         10           1
 P proline             5.7         30           5
 Q glutamine           4.8         25           1
 R arginine            7.5         39           2
 S serine              5.0         26           2
 T threonine           4.8         25           1
 V valine              6.9         36           3
 W tryptophan          2.9         15           2
 Y tyrosine            4.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA:cholesterol acyltransferase 2 
SOAT1                 0.454   sterol O-acyltransferase 1 
DGAT1                 0.103   diacylglycerol O-acyltransferase 1 
IQCE                  0.009   IQ motif containing E isoform 1 
IQCE                  0.009   IQ motif containing E isoform 2 
PORCN                 0.009   porcupine isoform C 
DBN1                  0.008   drebrin 1 isoform b 
DBN1                  0.008   drebrin 1 isoform a 
LOC100293650          0.008   PREDICTED: hypothetical protein 
LOC100290789          0.008   PREDICTED: hypothetical protein XP_002346935 
LOC100289506          0.008   PREDICTED: hypothetical protein XP_002342811 
LOC100289506          0.008   PREDICTED: hypothetical protein 
PERP                  0.007   PERP, TP53 apoptosis effector 
CNTROB                0.007   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.007   centrobin, centrosomal BRCA2 interacting protein iso...
MXI1                  0.007   MAX interactor 1 isoform a 
APBB1IP               0.006   amyloid beta (A4) precursor protein-binding, family ...
PORCN                 0.006   porcupine isoform E 
PORCN                 0.006   porcupine isoform A 
SLC12A6               0.005   solute carrier family 12, member 6 isoform e 
SLC12A6               0.005   solute carrier family 12, member 6 isoform d 
SLC12A6               0.005   solute carrier family 12, member 6 isoform c 
SLC12A6               0.005   solute carrier family 12, member 6 isoform c 
SLC12A6               0.005   solute carrier family 12, member 6 isoform b 
SLC12A6               0.005   solute carrier family 12, member 6 isoform a 
PWWP2A                0.005   PWWP domain containing 2A isoform b 
PWWP2A                0.005   PWWP domain containing 2A isoform a 
WAS                   0.005   Wiskott-Aldrich syndrome protein 
IL11                  0.005   interleukin 11 precursor 
TPCN1                 0.005   two pore segment channel 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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