Guide to the Human Genome
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Name: KIF3B Sequence: fasta or formatted (747aa) NCBI GI: 4758646
Description:

kinesin family member 3B

Referenced in:

Kinesins
Left-Right Axis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         47           2
 C cysteine            0.3          2           1
 D aspartate           5.2         39           2
 E glutamate          11.8         88           6
 F phenylalanine       2.1         16           2
 G glycine             6.0         45           4
 H histidine           2.1         16           1
 I isoleucine          5.0         37           2
 K lysine              9.6         72           2
 L leucine             8.4         63           2
 M methionine          2.5         19           2
 N asparagine          4.0         30           1
 P proline             3.1         23           1
 Q glutamine           5.4         40           3
 R arginine            7.4         55           2
 S serine              7.4         55           6
 T threonine           4.6         34           2
 V valine              6.0         45           3
 W tryptophan          0.4          3           1
 Y tyrosine            2.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 3B 
KIF3C                 0.615   kinesin family member 3C 
KIF3A                 0.449   kinesin family member 3A 
KIF17                 0.300   kinesin family member 17 isoform b 
KIF17                 0.300   kinesin family member 17 isoform a 
KIF11                 0.206   kinesin family member 11 
KIF13B                0.192   kinesin family member 13B 
KIF15                 0.192   kinesin family member 15 
KIF1C                 0.191   kinesin family member 1C 
KIF5A                 0.189   kinesin family member 5A 
KIF16B                0.185   kinesin-like motor protein C20orf23 
CENPE                 0.184   centromere protein E 
KIF1B                 0.183   kinesin family member 1B isoform alpha 
KIF1B                 0.183   kinesin family member 1B isoform b 
KIF27                 0.183   kinesin family member 27 
KIF5C                 0.182   kinesin family member 5C 
KIF13A                0.180   kinesin family member 13A isoform d 
KIF13A                0.180   kinesin family member 13A isoform c 
KIF13A                0.180   kinesin family member 13A isoform b 
KIF13A                0.180   kinesin family member 13A isoform a 
KIF4A                 0.180   kinesin family member 4 
KIF5B                 0.179   kinesin family member 5B 
KIF1A                 0.179   axonal transport of synaptic vesicles 
KIF4B                 0.179   kinesin family member 4B 
KIF21A                0.170   kinesin family member 21A 
KIF14                 0.170   kinesin family member 14 
KIF18A                0.167   kinesin family member 18A 
KIF21B                0.165   kinesin family member 21B 
KIF7                  0.160   kinesin family member 7 
KIF18B                0.156   kinesin family member 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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