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Search of human proteins with 4885629
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885629 trefoil factor 2 precursor [Homo sapiens]
(129 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885629 trefoil factor 2 precursor [Homo sapiens] 291 1e-79
gi|4507451 trefoil factor 1 precursor [Homo sapiens] 74 3e-14
gi|48928027 trefoil factor 3 precursor [Homo sapiens] 62 1e-10
gi|119393895 acid alpha-glucosidase preproprotein [Homo sapiens] 40 4e-04
gi|119393893 acid alpha-glucosidase preproprotein [Homo sapiens] 40 4e-04
gi|119393891 acid alpha-glucosidase preproprotein [Homo sapiens] 40 4e-04
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 37 0.003
gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3... 37 0.004
gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2... 37 0.004
gi|239758030 PREDICTED: keratin associated protein 4-8 isoform 1... 37 0.004
gi|239756798 PREDICTED: similar to keratin associated protein 4-... 37 0.004
gi|239756796 PREDICTED: similar to keratin associated protein 4-... 37 0.004
gi|239756794 PREDICTED: similar to keratin associated protein 4-... 37 0.004
gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens] 35 0.021
gi|239745805 PREDICTED: keratin associated protein 4.8 [Homo sap... 35 0.021
gi|225690554 keratin associated protein 4.8 [Homo sapiens] 35 0.021
gi|14210534 keratin associated protein 4.4 [Homo sapiens] 35 0.021
gi|225690544 keratin associated protein 4-11 [Homo sapiens] 34 0.028
gi|63053517 keratin associated protein 10-5 [Homo sapiens] 34 0.028
gi|239751306 PREDICTED: keratin associated protein 4-8 [Homo sap... 34 0.037
gi|225690551 keratin associated protein 4-9 [Homo sapiens] 33 0.081
gi|4505881 plasminogen [Homo sapiens] 32 0.11
gi|239743017 PREDICTED: hypothetical protein XP_002342719 [Homo ... 32 0.11
gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2... 32 0.14
gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1... 32 0.14
gi|21450863 attractin isoform 2 [Homo sapiens] 32 0.14
gi|21450861 attractin isoform 1 [Homo sapiens] 32 0.14
gi|15082228 keratin associated protein 4-2 [Homo sapiens] 32 0.14
gi|16118229 keratin associated protein 9-4 [Homo sapiens] 32 0.14
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 31 0.31
>gi|4885629 trefoil factor 2 precursor [Homo sapiens]
Length = 129
Score = 291 bits (744), Expect = 1e-79
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MGRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFD 60
MGRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFD
Sbjct: 1 MGRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFD 60
Query: 61 SSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFF 120
SSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFF
Sbjct: 61 SSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFF 120
Query: 121 PKSVEDCHY 129
PKSVEDCHY
Sbjct: 121 PKSVEDCHY 129
>gi|4507451 trefoil factor 1 precursor [Homo sapiens]
Length = 84
Score = 73.9 bits (180), Expect = 3e-14
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 1 MGRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFD 60
M + +++ AL+++ + AL G+ + + ++P R NCGFPG+T QC + GCCFD
Sbjct: 1 MATMENKVICALVLVSMLAL-GTLAEAQTETCTVAPRERQNCGFPGVTPSQCANKGCCFD 59
Query: 61 SSVTGVPWCFHP 72
+V GVPWCF+P
Sbjct: 60 DTVRGVPWCFYP 71
Score = 66.2 bits (160), Expect = 7e-12
Identities = 22/62 (35%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 73 LPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFFPKSV-----EDC 127
L + +++ C + +R+NCG+PG++P +CA++ CCF + + VPWCF+P ++ E+C
Sbjct: 23 LAEAQTETCTVAPRERQNCGFPGVTPSQCANKGCCFDDTVRGVPWCFYPNTIDVPPEEEC 82
Query: 128 HY 129
+
Sbjct: 83 EF 84
>gi|48928027 trefoil factor 3 precursor [Homo sapiens]
Length = 130
Score = 62.0 bits (149), Expect = 1e-10
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 13 LVLGLCALAGSEKP---SPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWC 69
LVL L + + +E+ S QC+ + +R +CG+P +T +C + GCCFDS + GVPWC
Sbjct: 61 LVLALLSSSSAEEYVGLSANQCA-VPAKDRVDCGYPHVTPKECNNRGCCFDSRIPGVPWC 119
Query: 70 FHPLPKQE 77
F PL + E
Sbjct: 120 FKPLQEAE 127
Score = 61.6 bits (148), Expect = 2e-10
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFFPKSVEDCHY 129
++QC + DR +CGYP ++P+EC +R CCF + I VPWCF P +C +
Sbjct: 79 ANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSRIPGVPWCFKPLQEAECTF 130
>gi|119393895 acid alpha-glucosidase preproprotein [Homo sapiens]
Length = 952
Score = 40.4 bits (93), Expect = 4e-04
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 38/131 (29%)
Query: 2 GRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCG-FPGITSDQCFDNGCCF- 59
G RDAQ A G + P QC + P++R +C IT +QC GCC+
Sbjct: 64 GPRDAQ-----------AHPGRPRAVPTQCD-VPPNSRFDCAPDKAITQEQCEARGCCYI 111
Query: 60 ------DSSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIF 113
+ G PWCF P YP E +S + ++ +
Sbjct: 112 PAKQGLQGAQMGQPWCFFP------------------PSYPSYKLENLSSSEMGYTATLT 153
Query: 114 EVPWCFFPKSV 124
FFPK +
Sbjct: 154 RTTPTFFPKDI 164
>gi|119393893 acid alpha-glucosidase preproprotein [Homo sapiens]
Length = 952
Score = 40.4 bits (93), Expect = 4e-04
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 38/131 (29%)
Query: 2 GRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCG-FPGITSDQCFDNGCCF- 59
G RDAQ A G + P QC + P++R +C IT +QC GCC+
Sbjct: 64 GPRDAQ-----------AHPGRPRAVPTQCD-VPPNSRFDCAPDKAITQEQCEARGCCYI 111
Query: 60 ------DSSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIF 113
+ G PWCF P YP E +S + ++ +
Sbjct: 112 PAKQGLQGAQMGQPWCFFP------------------PSYPSYKLENLSSSEMGYTATLT 153
Query: 114 EVPWCFFPKSV 124
FFPK +
Sbjct: 154 RTTPTFFPKDI 164
>gi|119393891 acid alpha-glucosidase preproprotein [Homo sapiens]
Length = 952
Score = 40.4 bits (93), Expect = 4e-04
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 38/131 (29%)
Query: 2 GRRDAQLLAALLVLGLCALAGSEKPSPCQCSRLSPHNRTNCG-FPGITSDQCFDNGCCF- 59
G RDAQ A G + P QC + P++R +C IT +QC GCC+
Sbjct: 64 GPRDAQ-----------AHPGRPRAVPTQCD-VPPNSRFDCAPDKAITQEQCEARGCCYI 111
Query: 60 ------DSSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIF 113
+ G PWCF P YP E +S + ++ +
Sbjct: 112 PAKQGLQGAQMGQPWCFFP------------------PSYPSYKLENLSSSEMGYTATLT 153
Query: 114 EVPWCFFPKSV 124
FFPK +
Sbjct: 154 RTTPTFFPKDI 164
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 37.4 bits (85), Expect = 0.003
Identities = 33/114 (28%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 18 CALAGSEKPSPCQC---SRLSPH--NRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHP 72
C A E PSPCQ S +P +++C TS C CC V P C P
Sbjct: 57 CCQAACE-PSPCQSGCTSSCTPSCCQQSSCQPACCTSSPC-QQACCVP--VCCKPVCCLP 112
Query: 73 LPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFFPKSVED 126
++S C + S + C S + C CC P C+ P ED
Sbjct: 113 TCSKDSSSCCQQSSCQPTCCASSSSQQSCCVPVCC-------KPVCYVPTCSED 159
>gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3
[Homo sapiens]
Length = 204
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P NC P + C CC S C P
Sbjct: 88 CCVSSCCKPQCCQSVCCQP----NCCRPSCSISSCCRPSCCVSS-------CCKP----- 131
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 132 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 162
Score = 35.4 bits (80), Expect = 0.013
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 53 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 96
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 97 --QCCQSVCCQPNCCRPSCSISSCCRPSCCVSS 127
>gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2
[Homo sapiens]
Length = 193
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P NC P + C CC S C P
Sbjct: 77 CCVSSCCKPQCCQSVCCQP----NCCRPSCSISSCCRPSCCVSS-------CCKP----- 120
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 121 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 151
Score = 33.1 bits (74), Expect = 0.062
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 18/86 (20%)
Query: 25 KPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQESDQCVME 84
KP CQ P C P C CC S C P QC
Sbjct: 49 KPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP-------QCCQS 90
Query: 85 VSDRRNCGYPGISPEECASRKCCFSN 110
V + NC P S C CC S+
Sbjct: 91 VCCQPNCCRPSCSISSCCRPSCCVSS 116
>gi|239758030 PREDICTED: keratin associated protein 4-8 isoform 1
[Homo sapiens]
Length = 220
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P NC P + C CC S C P
Sbjct: 104 CCVSSCCKPQCCQSVCCQP----NCCRPSCSISSCCRPSCCVSS-------CCKP----- 147
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 148 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 178
Score = 35.4 bits (80), Expect = 0.013
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 69 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 112
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 113 --QCCQSVCCQPNCCRPSCSISSCCRPSCCVSS 143
Score = 25.8 bits (55), Expect = 9.9
Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 42 CGFPGITSDQCFDNGCCFDSSVTGV--PWCFHPLPKQES---DQCVMEVSDRRNCGYPGI 96
C G D C + CC T C+ P QC V + C P
Sbjct: 10 CSDQGCGQDLCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQSVCCQPTCCRPSC 69
Query: 97 SPEECASRKCCFS 109
C +CC S
Sbjct: 70 CVSSCCKPQCCQS 82
>gi|239756798 PREDICTED: similar to keratin associated protein 4-12
isoform 3 [Homo sapiens]
Length = 204
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P NC P + C CC S C P
Sbjct: 88 CCVSSCCKPQCCQSVCCQP----NCCRPSCSISSCCRPSCCVSS-------CCKP----- 131
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 132 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 162
Score = 35.4 bits (80), Expect = 0.013
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 53 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 96
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 97 --QCCQSVCCQPNCCRPSCSISSCCRPSCCVSS 127
>gi|239756796 PREDICTED: similar to keratin associated protein 4-12
isoform 2 [Homo sapiens]
Length = 193
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P NC P + C CC S C P
Sbjct: 77 CCVSSCCKPQCCQSVCCQP----NCCRPSCSISSCCRPSCCVSS-------CCKP----- 120
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 121 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 151
Score = 33.1 bits (74), Expect = 0.062
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 18/86 (20%)
Query: 25 KPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQESDQCVME 84
KP CQ P C P C CC S C P QC
Sbjct: 49 KPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP-------QCCQS 90
Query: 85 VSDRRNCGYPGISPEECASRKCCFSN 110
V + NC P S C CC S+
Sbjct: 91 VCCQPNCCRPSCSISSCCRPSCCVSS 116
>gi|239756794 PREDICTED: similar to keratin associated protein 4-12
isoform 1 [Homo sapiens]
Length = 220
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P NC P + C CC S C P
Sbjct: 104 CCVSSCCKPQCCQSVCCQP----NCCRPSCSISSCCRPSCCVSS-------CCKP----- 147
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 148 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 178
Score = 35.4 bits (80), Expect = 0.013
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 69 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 112
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 113 --QCCQSVCCQPNCCRPSCSISSCCRPSCCVSS 143
Score = 25.8 bits (55), Expect = 9.9
Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 42 CGFPGITSDQCFDNGCCFDSSVTGV--PWCFHPLPKQES---DQCVMEVSDRRNCGYPGI 96
C G D C + CC T C+ P QC V + C P
Sbjct: 10 CSDQGCGQDLCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQSVCCQPTCCRPSC 69
Query: 97 SPEECASRKCCFS 109
C +CC S
Sbjct: 70 CVSSCCKPQCCQS 82
>gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]
Length = 2040
Score = 34.7 bits (78), Expect = 0.021
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 27 SPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCF--DSSVTGVPWCFHPLPKQESDQCVME 84
+PCQ +R + PG + C D + G PWC+ P++ D C +
Sbjct: 1739 TPCQEWAAQEPHRHSTFIPGTNKWAGLEKNYCRNPDGDING-PWCYTMNPRKLFDYCDIP 1797
Query: 85 V--SDRRNCGYPGISPEEC 101
+ S +CG P + P++C
Sbjct: 1798 LCASSSFDCGKPQVEPKKC 1816
>gi|239745805 PREDICTED: keratin associated protein 4.8 [Homo
sapiens]
Length = 185
Score = 34.7 bits (78), Expect = 0.021
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 69 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 112
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 113 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 143
Score = 25.8 bits (55), Expect = 9.9
Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 42 CGFPGITSDQCFDNGCCFDSSVTGV--PWCFHPLPKQES---DQCVMEVSDRRNCGYPGI 96
C G D C + CC T C+ P QC V + C P
Sbjct: 10 CSDQGCGQDLCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQSVCCQPTCCRPSC 69
Query: 97 SPEECASRKCCFS 109
C +CC S
Sbjct: 70 CVSSCCKPQCCQS 82
>gi|225690554 keratin associated protein 4.8 [Homo sapiens]
Length = 185
Score = 34.7 bits (78), Expect = 0.021
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 69 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 112
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 113 --QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 143
Score = 25.8 bits (55), Expect = 9.9
Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 42 CGFPGITSDQCFDNGCCFDSSVTGV--PWCFHPLPKQES---DQCVMEVSDRRNCGYPGI 96
C G D C + CC T C+ P QC V + C P
Sbjct: 10 CSDQGCGQDLCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQSVCCQPTCCRPSC 69
Query: 97 SPEECASRKCCFS 109
C +CC S
Sbjct: 70 CVSSCCKPQCCQS 82
>gi|14210534 keratin associated protein 4.4 [Homo sapiens]
Length = 166
Score = 34.7 bits (78), Expect = 0.021
Identities = 24/90 (26%), Positives = 29/90 (32%), Gaps = 13/90 (14%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ +P CQ + RT C P C CC SV P C P
Sbjct: 40 CCVSSCCRPQCCQTTCC----RTTCCHPSCCVSSCCRPQCC--QSVCCQPTCCRP----- 88
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCC 107
QC R C P +C CC
Sbjct: 89 --QCCQTTCCRTTCCRPSCCRPQCCQSVCC 116
Score = 28.9 bits (63), Expect = 1.2
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 9/69 (13%)
Query: 41 NCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEE 100
NC P C CC S V C P QC R C +P
Sbjct: 19 NCCRPSYCQTTCCRTTCCRPSCC--VSSCCRP-------QCCQTTCCRTTCCHPSCCVSS 69
Query: 101 CASRKCCFS 109
C +CC S
Sbjct: 70 CCRPQCCQS 78
>gi|225690544 keratin associated protein 4-11 [Homo sapiens]
Length = 195
Score = 34.3 bits (77), Expect = 0.028
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 18 CALAGSEKPSPCQCSRLSPHN-RTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQ 76
C ++ +PS C S P ++ C P +C + CC S V C P
Sbjct: 69 CCISSCCRPSCCVSSCCKPQCCQSMCCQPTCCRPRCCISSCCRPSCC--VSSCCRP---- 122
Query: 77 ESDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + C +P S C CC S+
Sbjct: 123 ---QCCQSVCCQPTCCHPSCSISSCCRPSCCESS 153
>gi|63053517 keratin associated protein 10-5 [Homo sapiens]
Length = 271
Score = 34.3 bits (77), Expect = 0.028
Identities = 30/109 (27%), Positives = 36/109 (33%), Gaps = 11/109 (10%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C A E PSPCQ S + C S C CC V P C P ++
Sbjct: 51 CCQAACE-PSPCQSGCTSSCTPSCCQPACCASSPC-QQACCVP--VCCKPVCCLPTCSKD 106
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFFPKSVED 126
S C + S + C + C CC P C P ED
Sbjct: 107 SSSCCQQSSCQPTCCASSSCQQSCCVPVCC-------KPVCCVPTCSED 148
Score = 25.8 bits (55), Expect = 9.9
Identities = 26/105 (24%), Positives = 32/105 (30%), Gaps = 16/105 (15%)
Query: 17 LCALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQ 76
+C L K S C + S C S C CC V P C P +
Sbjct: 97 VCCLPTCSKDSSSCCQQSS------CQPTCCASSSC-QQSCCVP--VCCKPVCCVPTCSE 147
Query: 77 ESDQCVMEVSDRRNCGYPGISPEECASRKCCFSNFIFEVPWCFFP 121
+S C S + C + C CC P CF P
Sbjct: 148 DSSSCCQHSSCQPTCCTSSPCQQSCYVPVCC-------KPVCFKP 185
>gi|239751306 PREDICTED: keratin associated protein 4-8 [Homo
sapiens]
Length = 195
Score = 33.9 bits (76), Expect = 0.037
Identities = 24/93 (25%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQE 77
C ++ KP CQ P C P C CC S C P
Sbjct: 79 CCVSSCCKPQCCQSVCCQP----TCCHPSCCISSCCRPSCCVSS-------CCKP----- 122
Query: 78 SDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + C +P S C CC S+
Sbjct: 123 --QCCQSVCCQPTCCHPSCSISSCCRPSCCESS 153
>gi|225690551 keratin associated protein 4-9 [Homo sapiens]
Length = 210
Score = 32.7 bits (73), Expect = 0.081
Identities = 25/96 (26%), Positives = 31/96 (32%), Gaps = 14/96 (14%)
Query: 18 CALAGSEKPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTG---VPWCFHPLP 74
C ++ +P CQ + P C P C CC S V C P
Sbjct: 84 CCVSSCCRPQCCQPACCQP----TCCRPSCCETTCCHPRCCISSCCRPSCCVSSCCKP-- 137
Query: 75 KQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
QC V + NC P S C CC S+
Sbjct: 138 -----QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 168
>gi|4505881 plasminogen [Homo sapiens]
Length = 810
Score = 32.3 bits (72), Expect = 0.11
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 55 NGCCFDSSVTGVPWCFHPLPKQESDQCVME--VSDRRNCGYPGISPEECASR 104
N C G PWC+ P++ D C + + +CG P + P++C R
Sbjct: 529 NYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQCAAPSFDCGKPQVEPKKCPGR 580
>gi|239743017 PREDICTED: hypothetical protein XP_002342719 [Homo
sapiens]
Length = 299
Score = 32.3 bits (72), Expect = 0.11
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 60 DSSVTGVPWCFHPLPKQESDQCVMEV--SDRRNCGYPGISPEEC 101
D + G PWC+ P++ D C + + S +CG P + P++C
Sbjct: 12 DGDING-PWCYRVNPRKLFDYCDIPLCASSSFDCGKPQVEPKKC 54
>gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2
[Homo sapiens]
Length = 195
Score = 32.0 bits (71), Expect = 0.14
Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 22/100 (22%)
Query: 18 CALAGSEKPSPCQ-------CSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF 70
C ++ +P CQ C R S T C P C CC S C
Sbjct: 69 CCVSSCCRPQCCQPVCCQPTCCRPSCCE-TTCCHPRCCISSCCRPSCCVSS-------CC 120
Query: 71 HPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
P QC V + NC P S C CC S+
Sbjct: 121 KP-------QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 153
>gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1
[Homo sapiens]
Length = 210
Score = 32.0 bits (71), Expect = 0.14
Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 22/100 (22%)
Query: 18 CALAGSEKPSPCQ-------CSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF 70
C ++ +P CQ C R S T C P C CC S C
Sbjct: 84 CCVSSCCRPQCCQPVCCQPTCCRPSCCE-TTCCHPRCCISSCCRPSCCVSS-------CC 135
Query: 71 HPLPKQESDQCVMEVSDRRNCGYPGISPEECASRKCCFSN 110
P QC V + NC P S C CC S+
Sbjct: 136 KP-------QCCQSVCCQPNCCRPSCSISSCCRPSCCESS 168
>gi|21450863 attractin isoform 2 [Homo sapiens]
Length = 1272
Score = 32.0 bits (71), Expect = 0.14
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 11/72 (15%)
Query: 16 GLCALAGSEKPSPCQCSRL-------SPHNRTNCGFP--GITSDQCFDNGCCFDSSVTGV 66
G C ++ S C+CS PH NCGFP GI + GC S G
Sbjct: 258 GECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICNSSDV-RGCSCFSDWQG- 315
Query: 67 PWCFHPLPKQES 78
P C P+P +S
Sbjct: 316 PGCSVPVPANQS 327
>gi|21450861 attractin isoform 1 [Homo sapiens]
Length = 1429
Score = 32.0 bits (71), Expect = 0.14
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 11/72 (15%)
Query: 16 GLCALAGSEKPSPCQCSRL-------SPHNRTNCGFP--GITSDQCFDNGCCFDSSVTGV 66
G C ++ S C+CS PH NCGFP GI + GC S G
Sbjct: 258 GECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICNSSDV-RGCSCFSDWQG- 315
Query: 67 PWCFHPLPKQES 78
P C P+P +S
Sbjct: 316 PGCSVPVPANQS 327
>gi|15082228 keratin associated protein 4-2 [Homo sapiens]
Length = 136
Score = 32.0 bits (71), Expect = 0.14
Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 26 PSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQESDQCVMEV 85
PS CQ + RT C P CF CC SV P C P Q + C
Sbjct: 63 PSCCQTTCC----RTTCCRPSCCVSSCFRPQCC--QSVCCQPTCCRPSCGQTT--CCRTT 114
Query: 86 SDRRNCGYPGISPEECASRKCC 107
R +C C+S CC
Sbjct: 115 CYRPSCCVSTCCRPTCSSGSCC 136
Score = 26.6 bits (57), Expect = 5.8
Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 11/82 (13%)
Query: 41 NCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQESDQCVMEVSDRRNCGYPGISPEE 100
NC P C CC S V C P QC V + C P
Sbjct: 19 NCCRPSCCQTTCCRTTCCRPSCC--VSSCCRP-------QCCQSVCCQPTCCSPSCCQTT 69
Query: 101 CASRKCCFSNFIFEVPWCFFPK 122
C CC + V CF P+
Sbjct: 70 CCRTTCCRPSCC--VSSCFRPQ 89
>gi|16118229 keratin associated protein 9-4 [Homo sapiens]
Length = 154
Score = 32.0 bits (71), Expect = 0.14
Identities = 31/111 (27%), Positives = 37/111 (33%), Gaps = 23/111 (20%)
Query: 25 KPSPCQCSRLSPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCFHPLPKQESDQCVME 84
+P+ CQ + P T+C P S C CC S +S C
Sbjct: 53 RPTCCQNTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSC-------------DQSSSCA-P 98
Query: 85 VSDRRNCGY------PGISPEECASRKC--CFSNFIFEVPWCFFPKSVEDC 127
V RR C Y PG + C S C C E CF P V C
Sbjct: 99 VYCRRTCYYPTTVCLPGCLNQSCGSNCCQPCCRPACCETT-CFQPTCVSSC 148
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 30.8 bits (68), Expect = 0.31
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 47 ITSDQCFDNGCCFD-SSVTGVPWCFHPLPKQESDQCVMEVSDRR--NCGYPGISPEECAS 103
+T+D+ + C + TGV WC LP Q ++ + V D R G++PE+ +
Sbjct: 4170 VTADEDVEFSCEVSRAGATGVQWCLQGLPLQSNEVTEVAVRDGRIHTLRLKGVTPEDAGT 4229
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.502
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,947,992
Number of Sequences: 37866
Number of extensions: 290144
Number of successful extensions: 1044
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 108
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.