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Search of human proteins with 4885135
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885135 cerberus 1 [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885135 cerberus 1 [Homo sapiens] 560 e-160
gi|7019349 gremlin-1 precursor [Homo sapiens] 71 9e-13
gi|22749329 dante precursor [Homo sapiens] 69 4e-12
gi|71164892 gremlin 2 precursor [Homo sapiens] 65 6e-11
gi|116284392 mucin 2 precursor [Homo sapiens] 54 2e-07
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 54 2e-07
gi|4885509 neuroblastoma, suppression of tumorigenicity 1 2 prec... 50 3e-06
gi|115387106 neuroblastoma, suppression of tumorigenicity 1 1 [H... 50 3e-06
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 40 0.002
gi|89191868 von Willebrand factor preproprotein [Homo sapiens] 35 0.052
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 35 0.089
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 35 0.089
gi|239755460 PREDICTED: similar to mucin, partial [Homo sapiens] 30 1.7
gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo ... 29 3.8
gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo ... 29 3.8
gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo ... 29 3.8
gi|119395738 insulin receptor isoform Short precursor [Homo sapi... 29 3.8
gi|119395736 insulin receptor isoform Long precursor [Homo sapiens] 29 3.8
gi|87299628 biorientation of chromosomes in cell division 1-like... 29 3.8
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 29 3.8
gi|102468717 mediator complex subunit 13 [Homo sapiens] 29 4.9
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 28 6.4
gi|21450749 carboxylesterase 7 isoform 2 [Homo sapiens] 28 6.4
gi|239743345 PREDICTED: hypothetical protein XP_002342795 [Homo ... 28 8.4
gi|239509033 PREDICTED: hypothetical protein [Homo sapiens] 28 8.4
gi|117414152 transcription factor 19 [Homo sapiens] 28 8.4
gi|117414156 transcription factor 19 [Homo sapiens] 28 8.4
gi|24308171 zinc finger protein 280C [Homo sapiens] 28 8.4
gi|19923191 minichromosome maintenance complex component 3 assoc... 28 8.4
>gi|4885135 cerberus 1 [Homo sapiens]
Length = 267
Score = 560 bits (1443), Expect = e-160
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MHLLLFQLLVLLPLGKTTRHQDGRQNQSSLSPVLLPRNQRELPTGNHEEAEEKPDLFVAV 60
MHLLLFQLLVLLPLGKTTRHQDGRQNQSSLSPVLLPRNQRELPTGNHEEAEEKPDLFVAV
Sbjct: 1 MHLLLFQLLVLLPLGKTTRHQDGRQNQSSLSPVLLPRNQRELPTGNHEEAEEKPDLFVAV 60
Query: 61 PHLVATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMK 120
PHLVATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMK
Sbjct: 61 PHLVATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMK 120
Query: 121 MEKSPLREEAKKFWHHFMFRKTPASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVV 180
MEKSPLREEAKKFWHHFMFRKTPASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVV
Sbjct: 121 MEKSPLREEAKKFWHHFMFRKTPASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVV 180
Query: 181 VQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEECQ 240
VQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEECQ
Sbjct: 181 VQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEECQ 240
Query: 241 CKVKTEHEDGHILHAGSQDSFIPGVSA 267
CKVKTEHEDGHILHAGSQDSFIPGVSA
Sbjct: 241 CKVKTEHEDGHILHAGSQDSFIPGVSA 267
>gi|7019349 gremlin-1 precursor [Homo sapiens]
Length = 184
Score = 71.2 bits (173), Expect = 9e-13
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 162 CRTVPFSQTITHEGCEKVVVQNNLCFGKCGSVHFP---GAAQHSHTSCSHCLPAKFTTMH 218
C+T P QTI EGC + N C+G+C S + P + S SCS C P KFTTM
Sbjct: 94 CKTQPLKQTIHEEGCNSRTIINRFCYGQCNSFYIPRHIRKEEGSFQSCSFCKPKKFTTMM 153
Query: 219 LPLNCTELSSVIKV--VMLVEECQC 241
+ LNC EL K V V++C+C
Sbjct: 154 VTLNCPELQPPTKKKRVTRVKQCRC 178
>gi|22749329 dante precursor [Homo sapiens]
Length = 189
Score = 68.9 bits (167), Expect = 4e-12
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 148 VILPIKSHEVHWETCRTVPFSQTITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCS 207
V LP+ EV C+ VPF Q + GC + ++N+LCFG C S++ PG+ C+
Sbjct: 87 VTLPLNPQEVIQGMCKAVPFVQVFSRPGCSAIRLRNHLCFGHCSSLYIPGSDPTPLVLCN 146
Query: 208 HCLPAKFTTMHLPLNCTELSSV----IKV-VMLVEECQCKVK 244
C+PA+ + L C SS +K+ ML+E C C K
Sbjct: 147 SCMPARKRWAPVVLWCLTGSSASRRRVKISTMLIEGCHCSPK 188
>gi|71164892 gremlin 2 precursor [Homo sapiens]
Length = 168
Score = 65.1 bits (157), Expect = 6e-11
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 134 WHHFMFRKTPASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVVVQNNLCFGKCGSV 193
W H + +SQ ++ + + + C+T P QT++ EGC + N C+G+C S
Sbjct: 45 WQHQIKEVLASSQEALVVTERKYLKSDWCKTQPLRQTVSEEGCRSRTILNRFCYGQCNSF 104
Query: 194 HFP---GAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSV--IKVVMLVEECQC 241
+ P + S SC+ C P + T++ + L C L +K + V++C+C
Sbjct: 105 YIPRHVKKEEESFQSCAFCKPQRVTSVLVELECPGLDPPFRLKKIQKVKQCRC 157
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 53.5 bits (127), Expect = 2e-07
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 162 CRTVPFSQTITHEGCEKVVVQNNLCFGKCGS-VHFPGAAQHSHTSCSHCLPAKFTTMHLP 220
C TVP + +++ GC K V+ N+ C G CG+ V + AQ SCS C K + +
Sbjct: 5075 CSTVPVTTEVSYAGCTKTVLMNH-CSGSCGTFVMYSAKAQALDHSCSCCKEEKTSQREVV 5133
Query: 221 LNCTELSSVIKVVMLVEECQCK 242
L+C S+ +E CQC+
Sbjct: 5134 LSCPNGGSLTHTYTHIESCQCQ 5155
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 53.5 bits (127), Expect = 2e-07
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 162 CRTVPFSQTITHEGCEKVVVQNNLCFGKCGS-VHFPGAAQHSHTSCSHCLPAKFTTMHLP 220
C TVP + +++ GC K V+ N+ C G CG+ V + AQ SCS C K + +
Sbjct: 2535 CSTVPVTTEVSYAGCTKTVLMNH-CSGSCGTFVMYSAKAQALDHSCSCCKEEKTSQREVV 2593
Query: 221 LNCTELSSVIKVVMLVEECQCK 242
L+C S+ +E CQC+
Sbjct: 2594 LSCPNGGSLTHTYTHIESCQCQ 2615
>gi|4885509 neuroblastoma, suppression of tumorigenicity 1 2
precursor [Homo sapiens]
Length = 180
Score = 49.7 bits (117), Expect = 3e-06
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 143 PASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHS 202
P ++ + P KS W C +Q + H GCE +QN C G+C S P S
Sbjct: 20 PINKLALFPDKSA---W--CEAKNITQIVGHSGCEAKSIQNRACLGQCFSYSVPNTFPQS 74
Query: 203 HTS---CSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEE-----CQCKVKTEHEDGHILH 254
S C C+PA+ + L C V +V LVE+ CQ K +G ++
Sbjct: 75 TESLVHCDSCMPAQSMWEIVTLECPGHEEVPRVDKLVEKILHCSCQACGKEPSHEGLSVY 134
Query: 255 AGSQD 259
+D
Sbjct: 135 VQGED 139
>gi|115387106 neuroblastoma, suppression of tumorigenicity 1 1 [Homo
sapiens]
Length = 216
Score = 49.7 bits (117), Expect = 3e-06
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 143 PASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHS 202
P ++ + P KS W C +Q + H GCE +QN C G+C S P S
Sbjct: 56 PINKLALFPDKSA---W--CEAKNITQIVGHSGCEAKSIQNRACLGQCFSYSVPNTFPQS 110
Query: 203 HTS---CSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEE-----CQCKVKTEHEDGHILH 254
S C C+PA+ + L C V +V LVE+ CQ K +G ++
Sbjct: 111 TESLVHCDSCMPAQSMWEIVTLECPGHEEVPRVDKLVEKILHCSCQACGKEPSHEGLSVY 170
Query: 255 AGSQD 259
+D
Sbjct: 171 VQGED 175
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 160 ETCRTVPFSQTITHEGCEKVVVQNNLCFGKC-GSVHFPGAAQHSHTSCSHCLPAKFTTMH 218
++C+ + + H+GCE V C G C G+ + AQ C+ C +
Sbjct: 5659 DSCQVRINTTILWHQGCE-TEVNITFCEGSCPGASKYSAEAQAMQHQCTCCQERRVHEET 5717
Query: 219 LPLNCTELSSVIKVVMLVEECQC 241
+PL+C S+++ V+EC C
Sbjct: 5718 VPLHCPNGSAILHTYTHVDECGC 5740
>gi|89191868 von Willebrand factor preproprotein [Homo sapiens]
Length = 2813
Score = 35.4 bits (80), Expect = 0.052
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 178 KVVVQNNLCFGKCGS-VHFPGAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSVIKVVMLV 236
+V V + C GKC S + CS C P + M + L+CT S V V+
Sbjct: 2742 EVEVDIHYCQGKCASKAMYSIDINDVQDQCSCCSPTRTEPMQVALHCTNGSVVYHEVLNA 2801
Query: 237 EECQC 241
EC+C
Sbjct: 2802 MECKC 2806
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 34.7 bits (78), Expect = 0.089
Identities = 41/159 (25%), Positives = 57/159 (35%), Gaps = 29/159 (18%)
Query: 23 GRQNQSSLSPVLL----PRNQRELPTGNHEEAEEKPDLFV--AVPHLVATSPAGEGQRQR 76
GR+ + SP LL PR + LP H A L A P L + A G+R R
Sbjct: 147 GREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTR 206
Query: 77 EKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMKMEKSPLREEAKKFWHH 136
S + P PPG +S P G ++E+ R A
Sbjct: 207 A-------------------SPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGG--RG 245
Query: 137 FMFRKTPASQGVILPIKSHEVHWETCRTV--PFSQTITH 173
R P ++PI H HW C + ++ +TH
Sbjct: 246 GAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTH 284
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 34.7 bits (78), Expect = 0.089
Identities = 41/159 (25%), Positives = 57/159 (35%), Gaps = 29/159 (18%)
Query: 23 GRQNQSSLSPVLL----PRNQRELPTGNHEEAEEKPDLFV--AVPHLVATSPAGEGQRQR 76
GR+ + SP LL PR + LP H A L A P L + A G+R R
Sbjct: 147 GREAEPRASPALLICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTR 206
Query: 77 EKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMKMEKSPLREEAKKFWHH 136
S + P PPG +S P G ++E+ R A
Sbjct: 207 A-------------------SPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGG--RG 245
Query: 137 FMFRKTPASQGVILPIKSHEVHWETCRTV--PFSQTITH 173
R P ++PI H HW C + ++ +TH
Sbjct: 246 GAQRIPPRPLRRLVPIHPHPSHWSFCTRLLEGWAPAVTH 284
>gi|239755460 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 1064
Score = 30.4 bits (67), Expect = 1.7
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 161 TCRTVPFSQTITHEGCEKVV-VQNNLCFGKCG--SVHFPGAAQHSHTSCSHCLPAKFTTM 217
TC S I +GC V+ C G CG S + C C + +
Sbjct: 941 TCAVYHRSLIIQQQGCSSSEPVRLAYCRGNCGDSSSMYSLEGNTVEHRCQCCQELRTSLR 1000
Query: 218 HLPLNCTELSSVIKVVMLVEECQC 241
++ L+CT+ SS VEEC C
Sbjct: 1001 NVTLHCTDGSSRAFSYTEVEECGC 1024
>gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo
sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 171 ITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAK 213
I H GC K++ Q L G G+ G ++SH+ S LP +
Sbjct: 150 INHPGCVKIICQGRL-HGPLGAGEPEGRGENSHSRGSSTLPRR 191
>gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo
sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 171 ITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAK 213
I H GC K++ Q L G G+ G ++SH+ S LP +
Sbjct: 150 INHPGCVKIICQGRL-HGPLGAGEPEGRGENSHSRGSSTLPRR 191
>gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo
sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 171 ITHEGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAK 213
I H GC K++ Q L G G+ G ++SH+ S LP +
Sbjct: 150 INHPGCVKIICQGRL-HGPLGAGEPEGRGENSHSRGSSTLPRR 191
>gi|119395738 insulin receptor isoform Short precursor [Homo
sapiens]
Length = 1370
Score = 29.3 bits (64), Expect = 3.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 158 HWETCRTVPFS--QTITH-------EGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSH 208
H++ R V FS Q + H +GC + V+ NN C +C S + S+ C+
Sbjct: 274 HFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGY---TMNSSNLLCTP 330
Query: 209 CL 210
CL
Sbjct: 331 CL 332
>gi|119395736 insulin receptor isoform Long precursor [Homo sapiens]
Length = 1382
Score = 29.3 bits (64), Expect = 3.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 158 HWETCRTVPFS--QTITH-------EGCEKVVVQNNLCFGKCGSVHFPGAAQHSHTSCSH 208
H++ R V FS Q + H +GC + V+ NN C +C S + S+ C+
Sbjct: 274 HFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGY---TMNSSNLLCTP 330
Query: 209 CL 210
CL
Sbjct: 331 CL 332
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 29.3 bits (64), Expect = 3.8
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 77 EKMLSRFGRFWKKPEREMHPSRDSD-SEPFPPGTQSLIQPIDGMKMEKSPLREEAKK 132
EK+++ R +KP+R + S D++ SEP +S+ P++ K ++S EE ++
Sbjct: 2938 EKIVTSVRRRGRKPKRSLTVSDDAESSEPERKRQKSVSDPVEDKKEQESDEEEEEEE 2994
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 29.3 bits (64), Expect = 3.8
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 34 LLPRNQRELPTGNHEEAEEKPDLFVAVPHLVATSPAGEGQRQREKMLSRFGRFWKKPERE 93
LL + ++E + EE EEK + P ++ A GQ Q L+R ++PE
Sbjct: 928 LLNQQEQEKEESSSEEEEEKAEERPRRPSQEQSASASSGQPQAP--LNR-----ERPESP 980
Query: 94 MHPSRDSDSEPFPPGTQSLIQPIDG 118
M PS E P Q+L DG
Sbjct: 981 MVPSEQVVEEAVPLPPQALTTSQDG 1005
>gi|102468717 mediator complex subunit 13 [Homo sapiens]
Length = 2174
Score = 28.9 bits (63), Expect = 4.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 90 PEREMHPSRDSDSEPFPPGTQSLIQPIDGMKMEKSPLREEAKKFWHHFMFRK 141
P + M DS S+ FPP Q ++P + + +EA W ++ F K
Sbjct: 571 PSKPMEDRIDSLSQSFPPQYQEAVEPTVYVGTAVNLEEDEANIAWKYYKFPK 622
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 28.5 bits (62), Expect = 6.4
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 65 ATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMKME-K 123
A SP E + EK S K PE+ P ++ P + + +D E K
Sbjct: 708 AKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAK 767
Query: 124 SPLREEAKKFWHHFMFR-KTPASQGVILPIKS 154
+P +EEA+ F + K+P + V P K+
Sbjct: 768 TPAKEEARSPADKFPEKAKSPVKEEVKSPEKA 799
>gi|21450749 carboxylesterase 7 isoform 2 [Homo sapiens]
Length = 525
Score = 28.5 bits (62), Expect = 6.4
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 55 DLFVAVPHLVATSPAGEGQRQREKMLSR-FGRFWKKPEREMHPS-RDSDSEPFPPGTQSL 112
D+F VP L+ EG + EK+LSR ++W R +P+ D P T+
Sbjct: 409 DVFFVVPALITARYHREGATEEEKLLSRKMMKYWATFARTGNPNGNDLSLWPAYNLTEQY 468
Query: 113 IQPIDGMKMEKSPLREEAKKFW 134
+Q M + + L+E FW
Sbjct: 469 LQLDLNMSLGQR-LKEPRVDFW 489
>gi|239743345 PREDICTED: hypothetical protein XP_002342795 [Homo
sapiens]
Length = 140
Score = 28.1 bits (61), Expect = 8.4
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 19 RHQDGRQNQSSLSPVLLP--------RNQRELPTGNHEEAEEKPDLFV--AVPHLVATSP 68
RHQ R + +S +L P Q + + H + KPD P + S
Sbjct: 9 RHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGISA 68
Query: 69 AGEGQRQREKMLSRFGRF-------WKKPEREMHPSR 98
AG G RQ + R W++PE MH S+
Sbjct: 69 AGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSK 105
>gi|239509033 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 28.1 bits (61), Expect = 8.4
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 19 RHQDGRQNQSSLSPVLLP--------RNQRELPTGNHEEAEEKPDLFV--AVPHLVATSP 68
RHQ R + +S +L P Q + + H + KPD P + S
Sbjct: 9 RHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGISA 68
Query: 69 AGEGQRQREKMLSRFGRF-------WKKPEREMHPSR 98
AG G RQ + R W++PE MH S+
Sbjct: 69 AGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSK 105
>gi|117414152 transcription factor 19 [Homo sapiens]
Length = 345
Score = 28.1 bits (61), Expect = 8.4
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 59 AVPHLVATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDG 118
A P + T+P+ QR R K + R + D +SEP L++P
Sbjct: 206 APPGEMGTTPSAPPQRNRRKSVHR-----------VLAELDDESEPPENPPPVLMEPRKK 254
Query: 119 MKMEKSPLREEAKKFWHHFMFRKTPASQGVILP-IKSHEVHWETCRTVPFSQTITHEGCE 177
++++K+PL + RK P S + P + E C +P +T+ C+
Sbjct: 255 LRVDKAPLTPTGNRRGRP---RKYPVSAPMAPPAVGGGEPCAAPCCCLPQEETVAWVQCD 311
>gi|117414156 transcription factor 19 [Homo sapiens]
Length = 345
Score = 28.1 bits (61), Expect = 8.4
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 59 AVPHLVATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDG 118
A P + T+P+ QR R K + R + D +SEP L++P
Sbjct: 206 APPGEMGTTPSAPPQRNRRKSVHR-----------VLAELDDESEPPENPPPVLMEPRKK 254
Query: 119 MKMEKSPLREEAKKFWHHFMFRKTPASQGVILP-IKSHEVHWETCRTVPFSQTITHEGCE 177
++++K+PL + RK P S + P + E C +P +T+ C+
Sbjct: 255 LRVDKAPLTPTGNRRGRP---RKYPVSAPMAPPAVGGGEPCAAPCCCLPQEETVAWVQCD 311
>gi|24308171 zinc finger protein 280C [Homo sapiens]
Length = 737
Score = 28.1 bits (61), Expect = 8.4
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 176 CEKVVVQNNLCFGKCGSVHFPGAAQHS-----HTSCSHCLPAKFTTMHLPLNCTELSSVI 230
C KV+ +NN+ F H Q++ HT+C HC T L + +
Sbjct: 321 CSKVL-KNNIRFMNHMKHHLELEKQNNESWENHTTCQHCYRQYPTPFQLQCHIESTHTPH 379
Query: 231 KVVMLVEECQCKVKTEHEDGHILHAGSQDSFIPG 264
+ + + C+ +TE HIL +D+ PG
Sbjct: 380 EFSTICKICELSFETE----HILLQHMKDTHKPG 409
>gi|19923191 minichromosome maintenance complex component 3
associated protein [Homo sapiens]
Length = 1980
Score = 28.1 bits (61), Expect = 8.4
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 78 KMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQP--IDGMKMEKSPLREEAKKFWH 135
K + R G K E S +SD P G QS++ P I G+ E+ E K+
Sbjct: 350 KEVGRLGNKEAKKETGFVESAESDHMAIPGGNQSVLAPSRIPGVNKEEETESREKKE--- 406
Query: 136 HFMFRKTPASQ 146
R TPA Q
Sbjct: 407 -DSLRGTPARQ 416
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,185,256
Number of Sequences: 37866
Number of extensions: 624503
Number of successful extensions: 1558
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1538
Number of HSP's gapped (non-prelim): 37
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.