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Search of human proteins with 4826944
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo
sapiens]
(166 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 365 e-101
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 365 e-101
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 360 e-100
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 192 8e-50
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 192 1e-49
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 182 1e-46
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 169 1e-42
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 169 1e-42
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 160 4e-40
gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens] 96 1e-20
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 80 1e-15
gi|7706501 WW domain binding protein 11 [Homo sapiens] 79 2e-15
gi|19924099 synapsin I isoform Ia [Homo sapiens] 77 9e-15
gi|19924097 synapsin I isoform Ib [Homo sapiens] 77 9e-15
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 73 1e-13
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 73 1e-13
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 72 2e-13
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 72 2e-13
gi|154448882 proline rich 4 (lacrimal) isoform 1 [Homo sapiens] 71 4e-13
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 70 6e-13
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 70 6e-13
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 70 6e-13
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 70 8e-13
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 70 8e-13
gi|50511941 EMI domain containing 1 [Homo sapiens] 66 1e-11
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 65 2e-11
gi|50428940 mediator complex subunit 25 [Homo sapiens] 65 2e-11
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 65 3e-11
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 65 3e-11
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 65 3e-11
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 365 bits (936), Expect = e-101
Identities = 166/166 (100%), Positives = 166/166 (100%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA
Sbjct: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
Query: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP 120
GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
Sbjct: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP 120
Query: 121 PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ
Sbjct: 121 PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 365 bits (936), Expect = e-101
Identities = 166/166 (100%), Positives = 166/166 (100%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA
Sbjct: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
Query: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP 120
GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
Sbjct: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP 120
Query: 121 PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ
Sbjct: 121 PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 360 bits (924), Expect = e-100
Identities = 163/166 (98%), Positives = 166/166 (100%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
MLLILLSVALLAFSSAQDL+EDVSQEDVPLVISDGGDSEQF+DEERQGPPLGGQQSQPSA
Sbjct: 1 MLLILLSVALLAFSSAQDLNEDVSQEDVPLVISDGGDSEQFLDEERQGPPLGGQQSQPSA 60
Query: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP 120
GDGNQ+DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
Sbjct: 61 GDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP 120
Query: 121 PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ
Sbjct: 121 PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 192 bits (489), Expect = 8e-50
Identities = 107/200 (53%), Positives = 122/200 (61%), Gaps = 34/200 (17%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDG--GDSEQFIDEERQGPPLGGQQSQP 58
MLLILLSVALLA SSAQ+L+EDVSQE+ P +I+ G S Q ++ + PP G+ P
Sbjct: 1 MLLILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGP 60
Query: 59 SAGDGNQNDGPQ-------------------------QGPPQQGGQQQQGPPPPQGKPQG 93
GN+ GP QGPP QGG Q QGPPPP GKPQG
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 120
Query: 94 PPQQGGHPP---PPQGRPQGPPQQGGH---PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQ 147
PP QGG+ P PP G+PQGPP QG PR P G+PQGPP QGG+Q PPPPPGKPQ
Sbjct: 121 PPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 180
Query: 148 GPPPQGG-RPQGPPQGQSPQ 166
GPPPQGG +PQGPP PQ
Sbjct: 181 GPPPQGGKKPQGPPPPGKPQ 200
Score = 159 bits (401), Expect = 1e-39
Identities = 80/132 (60%), Positives = 88/132 (66%), Gaps = 12/132 (9%)
Query: 47 QGPPLGGQ-QSQPSAGDGNQND----GPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHP 101
QGPP G+ Q P GD +++ G QGPP QGG Q QGPPPP GKPQGPP QGG
Sbjct: 130 QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKK 189
Query: 102 P---PPQGRPQGPPQQGGHPRP---PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG- 154
P PP G+PQGPP QG R P G+PQGPP QGG+Q PPPPPGKPQGPPPQGG
Sbjct: 190 PQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 249
Query: 155 RPQGPPQGQSPQ 166
+PQGPP PQ
Sbjct: 250 KPQGPPPPGKPQ 261
Score = 146 bits (368), Expect = 9e-36
Identities = 79/141 (56%), Positives = 88/141 (62%), Gaps = 26/141 (18%)
Query: 47 QGPPLGGQ-QSQPSAGDGNQND----GPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHP 101
QGPP G+ Q P GD +++ G QGPP QGG Q QGPPPP GKPQGPP QGG+
Sbjct: 191 QGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 250
Query: 102 P---PPQGRPQGPPQQGG----HPRPPRGRPQGPPQQ-GGHQQGPPP-----------PP 142
P PP G+PQGPP QGG R P G+PQGPPQQ G + QGPPP PP
Sbjct: 251 PQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 310
Query: 143 PGKPQGP--PPQGGRPQGPPQ 161
G+PQGP PPQGGRP PPQ
Sbjct: 311 AGQPQGPPRPPQGGRPSRPPQ 331
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 192 bits (487), Expect = 1e-49
Identities = 102/173 (58%), Positives = 113/173 (65%), Gaps = 20/173 (11%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
MLLILLSVALLA SSAQ+L+EDVSQE+ P +I+ PP GG + Q
Sbjct: 1 MLLILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQG---------APPQGGNKPQGPP 51
Query: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPP---PPQGRPQGPPQQGGH 117
G QGPP QGG Q QGPPPP GKPQGPP QGG+ P PP G+PQGPP QG
Sbjct: 52 SP----PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDK 107
Query: 118 ---PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG-RPQGPPQGQSPQ 166
PR P G+PQGPP QGG+Q PPPPPGKPQGPPPQGG +PQGPP PQ
Sbjct: 108 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 160
Score = 161 bits (408), Expect = 2e-40
Identities = 81/134 (60%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
Query: 47 QGPPLGGQ-QSQPSAGDGNQND-----GPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGH 100
QGPP G+ Q P GD G QGPP QGG Q QGPPPP GKPQGPP QGG+
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 272
Query: 101 PP---PPQGRPQGPPQQGGHP----RPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQG 153
P PP G+PQGPP QGG R P G+PQGPP QGG+Q PPPPPGKPQGPPPQG
Sbjct: 273 KPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 332
Query: 154 G-RPQGPPQGQSPQ 166
G +PQGPP PQ
Sbjct: 333 GNKPQGPPPPGKPQ 346
Score = 159 bits (403), Expect = 8e-40
Identities = 80/134 (59%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
Query: 47 QGPPLGGQ-QSQPSAGDGNQND-----GPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGH 100
QGPP G+ Q P GD G QGPP QGG Q QGPPPP GKPQGPP QGG+
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 210
Query: 101 PP---PPQGRPQGPPQQGGHP----RPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQG 153
P PP G+PQGPP QG + R P G+PQGPP QGG+Q PPPPPGKPQGPPPQG
Sbjct: 211 KPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 270
Query: 154 G-RPQGPPQGQSPQ 166
G +PQGPP PQ
Sbjct: 271 GNKPQGPPPPGKPQ 284
Score = 144 bits (363), Expect = 3e-35
Identities = 77/142 (54%), Positives = 86/142 (60%), Gaps = 27/142 (19%)
Query: 47 QGPPLGGQQSQPSAGDGNQN------DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGH 100
QGPP G+ P G+++ G QGPP QGG Q QGPPPP GKPQGPP QGG+
Sbjct: 275 QGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 334
Query: 101 PP---PPQGRPQGPPQQGG----HPRPPRGRPQGPPQQ-GGHQQGPPP-----------P 141
P PP G+PQGPP QGG R P G+PQGPPQQ G + QGPPP P
Sbjct: 335 KPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 394
Query: 142 PPGKPQGP--PPQGGRPQGPPQ 161
P G+PQGP PPQGGRP PPQ
Sbjct: 395 PAGQPQGPPRPPQGGRPSRPPQ 416
Score = 138 bits (347), Expect = 2e-33
Identities = 78/149 (52%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Query: 44 EERQGPPLGGQQSQPSAGDGNQNDGPQ----QGPPQQGGQQQQGPPPPQGKPQGPPQQGG 99
+ + PP Q P G+ Q P QGPP QGG + QGPPPP GKPQGPP QGG
Sbjct: 233 QSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP-GKPQGPPPQGG 291
Query: 100 HPP----PPQGRPQGPPQQGGH----PRPPRGRPQGPPQQGGHQ-QGPPPPPPGKPQGPP 150
P G+PQGPP QGG+ P PP G+PQGPP QGG++ QG PPPPGKPQGPP
Sbjct: 292 SKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG--PPPPGKPQGPP 349
Query: 151 PQG-----------GRPQGPPQ--GQSPQ 166
PQG G+PQGPPQ G +PQ
Sbjct: 350 PQGGSKSRSARSPPGKPQGPPQQEGNNPQ 378
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 182 bits (462), Expect = 1e-46
Identities = 102/190 (53%), Positives = 122/190 (64%), Gaps = 25/190 (13%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVIS---DGGDSEQFIDEERQGPPLGGQQSQ 57
MLLILLSVALLA SSAQ L+EDVSQE+ P VIS +G + +R PP G + +
Sbjct: 1 MLLILLSVALLALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGR 60
Query: 58 PSAGDGNQNDGPQ------QGPPQQGGQQQQGPPPPQGKPQGPPQQGGH----PPPPQGR 107
P G GNQ+ GP +GPP QGG Q QGPPP GKP+G P QGG+ PPP G+
Sbjct: 61 PPQG-GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGK 119
Query: 108 PQGPPQQGGH----PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG-RPQGP--- 159
P+GPP QGG+ P P G+P+GPP QGG+Q PPP PGKP+GPPPQGG + QGP
Sbjct: 120 PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPH 179
Query: 160 ---PQGQSPQ 166
P+G PQ
Sbjct: 180 PGKPEGPPPQ 189
Score = 146 bits (368), Expect = 9e-36
Identities = 75/144 (52%), Positives = 87/144 (60%), Gaps = 26/144 (18%)
Query: 49 PPLGGQQSQ-----------PSAGDGNQNDGPQ------QGPPQQGGQQQQGPPPPQGKP 91
PP GG QSQ P GNQ+ GP +GPP QGG Q QGPPP GKP
Sbjct: 124 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKP 183
Query: 92 QGPPQQGGH----PPPPQGRPQGPPQQGGH----PRPPRGRPQGPPQQGGHQQGPPPPPP 143
+GPP QGG+ PPP G+P+GPP QGG+ P P G+P+GPP QGG++ PPP P
Sbjct: 184 EGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHP 243
Query: 144 GKPQGPPPQ-GGRPQGPPQGQSPQ 166
GKPQGPPPQ G +PQ PP PQ
Sbjct: 244 GKPQGPPPQEGNKPQRPPPPGRPQ 267
Score = 145 bits (365), Expect = 2e-35
Identities = 82/165 (49%), Positives = 90/165 (54%), Gaps = 47/165 (28%)
Query: 49 PPLGGQQSQ-----------PSAGDGNQNDGPQ------QGPPQQGGQQQQGPPPPQGKP 91
PP GG QSQ P GNQ+ GP +GPP QGG Q QGPPP GKP
Sbjct: 145 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP 204
Query: 92 QGPPQQGGH----PPP----PQG-------RPQGPPQQGGHPR-------------PPRG 123
+GPP QGG+ PPP P+G +PQGPP G P+ PP G
Sbjct: 205 EGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPG 264
Query: 124 RPQGPPQQGGHQQGPPPPPPGKPQG--PPPQGGRPQGPPQGQSPQ 166
RPQGPP GG+ Q P PPP GKPQG PPPQGGRP PPQGQ PQ
Sbjct: 265 RPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 36 GDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQG-----K 90
G Q ++ ++ PP G Q P G GN PQQ P G+ Q PPPPQG
Sbjct: 248 GPPPQEGNKPQRPPPPGRPQGPPPPG-GN----PQQPLPPPAGKPQGPPPPPQGGRPHRP 302
Query: 91 PQGPPQQ 97
PQG P Q
Sbjct: 303 PQGQPPQ 309
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 169 bits (428), Expect = 1e-42
Identities = 102/198 (51%), Positives = 119/198 (60%), Gaps = 37/198 (18%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDG--GDSEQFIDEERQGPPLGGQQSQP 58
MLLILLSVALLA SSAQ+L+EDVSQE+ P +I+ G S Q ++ + PP G+ P
Sbjct: 1 MLLILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGP 60
Query: 59 SAGDGNQNDGPQ-----QGPPQQGGQQQ---------QGPPPPQGKPQGPPQQGGHPP-- 102
GN+ GP QGPP QG + + QGPPP GKPQGPP QGG+ P
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQG 120
Query: 103 -PPQGRPQGPPQQGGHP----RPPRGRPQGPPQQ-GGHQQGPPP-----------PPPGK 145
PP G+PQGPP QGG R P G+PQGPPQQ G + QGPPP PP G+
Sbjct: 121 PPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 180
Query: 146 PQGP--PPQGGRPQGPPQ 161
PQGP PPQGGRP PPQ
Sbjct: 181 PQGPPRPPQGGRPSRPPQ 198
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 169 bits (427), Expect = 1e-42
Identities = 98/196 (50%), Positives = 116/196 (59%), Gaps = 31/196 (15%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVIS---DGGDSEQFIDEERQGPPLGGQQSQ 57
MLLILLSVALLA SSA+ EDVSQE+ +IS +G + +R PP G Q
Sbjct: 1 MLLILLSVALLALSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRPPPPPGKPQGP 60
Query: 58 PSAGDGNQNDGPQ------QGPPQQGGQQQQGPPPPQGKPQGPPQQGGHP----PPPQGR 107
P G GNQ+ GP +G P QGG Q QGPPP GKP+ PP QGG+ PPP G+
Sbjct: 61 PPQG-GNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGK 119
Query: 108 PQGPPQQGGH----PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQ----------- 152
P+ PP QGG+ P PP G+P+ PP QGG+Q PPP PGKP+GPPPQ
Sbjct: 120 PERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSP 179
Query: 153 GGRPQGPPQ--GQSPQ 166
G+PQGPPQ G PQ
Sbjct: 180 PGKPQGPPQQEGNKPQ 195
Score = 85.5 bits (210), Expect = 2e-17
Identities = 52/106 (49%), Positives = 59/106 (55%), Gaps = 27/106 (25%)
Query: 49 PPLGGQQSQ-----------PSAGDGNQN------DGPQQGPPQQGGQQQQGPPPPQGKP 91
PP GG QSQ P +GN++ G QGPPQQ G + QGPPPP GKP
Sbjct: 145 PPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPP-GKP 203
Query: 92 QGPPQQGGHPP----PPQGRPQG---PPQQGGHPRPPRGRPQGPPQ 130
QGPP GG+P PP G+PQG PPQ G PRP +G Q PPQ
Sbjct: 204 QGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQG--QQPPQ 247
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 160 bits (406), Expect = 4e-40
Identities = 101/198 (51%), Positives = 112/198 (56%), Gaps = 57/198 (28%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
MLLILLSVALLA SSAQ+L+EDVSQE+ P +I+ G P G PS
Sbjct: 1 MLLILLSVALLALSSAQNLNEDVSQEESPSLIA--------------GNPQG-----PSP 41
Query: 61 GDGNQNDGPQ------QGPPQQGGQQQQGPPPPQGKPQGPPQQGGH-------------P 101
GN+ GP QGPP QGG + QGPPPP GKPQGPP QG P
Sbjct: 42 QGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPP-GKPQGPPPQGDKSRSPRSPPGKPQGP 100
Query: 102 PPPQGRPQGPPQQGG----HPRPPRGRPQGPPQQ-GGHQQGPPP-----------PPPGK 145
PP G+PQGPP QGG R P G+PQGPPQQ G + QGPPP PP G+
Sbjct: 101 PPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 160
Query: 146 PQGP--PPQGGRPQGPPQ 161
PQGP PPQGGRP PPQ
Sbjct: 161 PQGPPRPPQGGRPSRPPQ 178
>gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens]
Length = 134
Score = 96.3 bits (238), Expect = 1e-20
Identities = 50/98 (51%), Positives = 59/98 (60%)
Query: 1 MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA 60
MLL+LLSV LLA SSAQ D DV+ ED I D DS Q D+ Q PP G +P
Sbjct: 1 MLLVLLSVVLLALSSAQSTDNDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPG 60
Query: 61 GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG 98
GNQ+DGPQQ PP+ GG + PPPP Q PP++G
Sbjct: 61 DSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 98
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 79.7 bits (195), Expect = 1e-15
Identities = 60/151 (39%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 38 SEQFIDEERQGPPLGGQQSQ-PSAG-----------DGNQNDGPQQ--GPPQQGGQQQQG 83
S Q E + GPP G ++ P G G++ GP GPP Q
Sbjct: 177 SGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTP 236
Query: 84 PPPPQGKPQGPPQQGGHPPPPQGRPQ---GPPQQGGHPRPP---RGRPQGPPQQGGHQQG 137
P PP G P GPP G PPP Q P GPP +G P PP G+P G P G G
Sbjct: 237 PRPPLGPP-GPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG 295
Query: 138 PPPPPPG---KPQGPPPQGGRPQGPPQGQSP 165
PPPP PG P PPPQ G P PP G P
Sbjct: 296 PPPPVPGYGPPPGPPPPQQGPP--PPPGPFP 324
Score = 62.0 bits (149), Expect = 2e-10
Identities = 53/139 (38%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 50 PLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPP-QGKPQ---GPPQQGGHPPPP- 104
P G P G P GPP G GPPPP Q P GPP +G PPPP
Sbjct: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPP--GPPPPGQVLPPPLAGPPNRGDRPPPPV 277
Query: 105 --QGRPQGPPQQGGHPR----------PPRGRP---QGPPQQGGHQQGPPPPPPGKPQGP 149
G+P G P G P PP G P QGPP GP PP P P GP
Sbjct: 278 LFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPP----PPGPFPPRPPGPLGP 333
Query: 150 PPQGGRP---QGPPQGQSP 165
P P GPP G P
Sbjct: 334 PLTLAPPPHLPGPPPGAPP 352
Score = 61.6 bits (148), Expect = 3e-10
Identities = 56/148 (37%), Positives = 57/148 (38%), Gaps = 35/148 (23%)
Query: 48 GPPLGGQQSQPS-AGDGNQNDGPQQG---PPQQGGQQQQGPPPP--------QGKPQGPP 95
GPP GQ P AG N+ D P P Q GQ GP PP G P GPP
Sbjct: 251 GPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPP 310
Query: 96 Q-QGGHPPPPQGRPQGPPQQGGHPR----PPR--GRPQGPPQQGGHQQG---PPP----- 140
Q G PPPP P PP G P PP G P G P H PPP
Sbjct: 311 PPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGM 370
Query: 141 -------PPPGKPQG-PPPQGGRPQGPP 160
PPP P G PPP GPP
Sbjct: 371 PTSDSRGPPPTDPYGRPPPYDRGDYGPP 398
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 79.0 bits (193), Expect = 2e-15
Identities = 61/154 (39%), Positives = 72/154 (46%), Gaps = 32/154 (20%)
Query: 34 DGGDSEQFI---DEERQGPPLGGQQSQPSAGDGNQNDGP------QQGPPQQGGQQQ-QG 83
+G + E+F DE+ +QSQ + + +DG QQ PPQ Q Q
Sbjct: 345 EGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQA 404
Query: 84 PP----PPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHP--RPP----------RGRPQG 127
PP PP G P PP + P PP G P GPP G P RPP R P G
Sbjct: 405 PPMPGPPPLGPPPAPPLRP--PGPPTGLPPGPPP-GAPPFLRPPGMPGLRGPLPRLLPPG 461
Query: 128 PPQQGGHQQGPPP-PPPGKPQGPPPQGGRPQGPP 160
PP G GPPP PPPG P GPPP+G P+ PP
Sbjct: 462 PPP--GRPPGPPPGPPPGLPPGPPPRGPPPRLPP 493
Score = 73.9 bits (180), Expect = 6e-14
Identities = 53/153 (34%), Positives = 59/153 (38%), Gaps = 38/153 (24%)
Query: 37 DSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQG---GQQQQGPPPPQGKPQG 93
D ++Q PP SQ A P GPP G + P PP G P G
Sbjct: 381 DGTSTASSQQQAPPQSVPPSQIQAP-------PMPGPPPLGPPPAPPLRPPGPPTGLPPG 433
Query: 94 PPQQGGHPP---------------------PPQGRPQGPPQQGGHPRPPRGRPQGPPQQG 132
PP G PP PP GRP GPP P PP G P GPP +G
Sbjct: 434 PPP--GAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPP-----PGPPPGLPPGPPPRG 486
Query: 133 GHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSP 165
+ PPP PPG P P P PP G +P
Sbjct: 487 PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAP 519
Score = 61.2 bits (147), Expect = 4e-10
Identities = 49/130 (37%), Positives = 55/130 (42%), Gaps = 33/130 (25%)
Query: 49 PPLGGQQSQPSAGDGNQND---GPQQGPPQ----------QGGQQQQGPP-PPQGKPQGP 94
PPLG + P G GP G P +G + PP PP G+P GP
Sbjct: 411 PPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGP 470
Query: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGP--PPQ 152
P P PP G P GPP +G PR P P PP G PPP PG + P PP
Sbjct: 471 P-----PGPPPGLPPGPPPRGPPPRLP---PPAPP-------GIPPPRPGMMRPPLVPPL 515
Query: 153 GGRPQG--PP 160
G P G PP
Sbjct: 516 GPAPPGLFPP 525
Score = 56.2 bits (134), Expect = 1e-08
Identities = 42/114 (36%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 48 GPPLGGQQS-QPSAGDGNQNDGPQQGPPQQGGQQQQGPPP--PQGKPQGPPQQGGHPPPP 104
GPP G +P G + P+ PP + GPPP P G P GPP +G P P
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLP 492
Query: 105 QGRPQG-PPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQ 157
P G PP + G RPP P GP G P P PG PP RP+
Sbjct: 493 PPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPA-PLPNPGVLSAPPNLIQRPK 545
Score = 28.1 bits (61), Expect = 3.6
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 16/48 (33%)
Query: 127 GPPQQG-------GHQQGPPPPPPG-KPQGPPPQGGRPQGPPQGQSPQ 166
GPP + GH G P PPG KP GPPP GPP Q Q
Sbjct: 174 GPPTRAVSILPLLGH--GVPRLPPGRKPPGPPP------GPPPPQVVQ 213
Score = 27.3 bits (59), Expect = 6.1
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 12/65 (18%)
Query: 92 QGPPQQGGHPPP--PQGRPQGPPQQGGHPRPPRGR--PQGPPQQGGHQQGPPPPPPGKPQ 147
Q P G PP + GPP + P G P+ PP G GPPP P
Sbjct: 154 QDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPP--GRKPPGPPPGP----- 206
Query: 148 GPPPQ 152
PPPQ
Sbjct: 207 -PPPQ 210
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 76.6 bits (187), Expect = 9e-15
Identities = 59/152 (38%), Positives = 62/152 (40%), Gaps = 42/152 (27%)
Query: 50 PLGGQQSQPSAGD-GNQNDGPQQGPPQQG-GQQQQGPP-----PPQGK------------ 90
PLG Q SQ AG Q PQ GPPQ G G Q+QGPP PPQG+
Sbjct: 443 PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGS 502
Query: 91 ------------PQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP 138
PQ P Q P QGR Q P GG PP RP P Q GP
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGR-QSRPVAGGPGAPPAARPPASPSPQ-RQAGP 560
Query: 139 PP---------PPPGKPQGPPPQGGRPQGPPQ 161
P P P K G PP G + QGPPQ
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQ 592
Score = 57.0 bits (136), Expect = 7e-09
Identities = 51/169 (30%), Positives = 64/169 (37%), Gaps = 27/169 (15%)
Query: 15 SAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPP 74
S+ L D ED L++ E +++ Q P +Q S G G+ P G
Sbjct: 390 SSMPLIGDHQDEDKQLIV------ELVVNKMAQALPRQ-RQRDASPGRGSHGQTPSPGAL 442
Query: 75 QQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQ-----------------GGH 117
G Q Q P P + + PPQ G P P + QGPP Q G
Sbjct: 443 PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGS 502
Query: 118 PRPPR-GRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSP 165
P P R P PQQ Q PP G+ Q P GG P PP + P
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGR-QSRPVAGG-PGAPPAARPP 549
Score = 52.0 bits (123), Expect = 2e-07
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 44 EERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
+ + GPP +Q+ S + G PP GGQQ+QGPP P GP +Q P
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASG---APP--GGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 104 PQGRPQGPPQQGGHPRP----PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQ 157
P+ P PRP P GRP+ Q Q PPP P PQ + Q
Sbjct: 610 V---PRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQ 664
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 76.6 bits (187), Expect = 9e-15
Identities = 59/152 (38%), Positives = 62/152 (40%), Gaps = 42/152 (27%)
Query: 50 PLGGQQSQPSAGD-GNQNDGPQQGPPQQG-GQQQQGPP-----PPQGK------------ 90
PLG Q SQ AG Q PQ GPPQ G G Q+QGPP PPQG+
Sbjct: 443 PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGS 502
Query: 91 ------------PQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP 138
PQ P Q P QGR Q P GG PP RP P Q GP
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGR-QSRPVAGGPGAPPAARPPASPSPQ-RQAGP 560
Query: 139 PP---------PPPGKPQGPPPQGGRPQGPPQ 161
P P P K G PP G + QGPPQ
Sbjct: 561 PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQ 592
Score = 57.0 bits (136), Expect = 7e-09
Identities = 51/169 (30%), Positives = 64/169 (37%), Gaps = 27/169 (15%)
Query: 15 SAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPP 74
S+ L D ED L++ E +++ Q P +Q S G G+ P G
Sbjct: 390 SSMPLIGDHQDEDKQLIV------ELVVNKMAQALPRQ-RQRDASPGRGSHGQTPSPGAL 442
Query: 75 QQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQ-----------------GGH 117
G Q Q P P + + PPQ G P P + QGPP Q G
Sbjct: 443 PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGS 502
Query: 118 PRPPR-GRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSP 165
P P R P PQQ Q PP G+ Q P GG P PP + P
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGR-QSRPVAGG-PGAPPAARPP 549
Score = 53.5 bits (127), Expect = 8e-08
Identities = 41/124 (33%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 44 EERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
+ + GPP +Q+ S + G PP GGQQ+QGPP P GP +Q P
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASG---APP--GGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 104 PQGRPQGPPQQGGHPRP----PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGP 159
P+ P PRP P GRP+ PQ PPP G PP P
Sbjct: 610 V---PRTGPPTTQQPRPSGPGPAGRPK--PQLAQKPSQDVPPPATAAAGGPPHPQLKASP 664
Query: 160 PQGQ 163
Q Q
Sbjct: 665 AQAQ 668
Score = 29.6 bits (65), Expect = 1.2
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Query: 46 RQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQ--QQGPPPPQGKPQGPPQQGGHPPP 103
R GPP QQ +PS GP P Q Q+ Q PPP GPP P
Sbjct: 612 RTGPPTT-QQPRPSG------PGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASP 664
Query: 104 PQGRP 108
Q +P
Sbjct: 665 AQAQP 669
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 73.2 bits (178), Expect = 1e-13
Identities = 54/134 (40%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 43 DEERQGPPLGGQQSQ----------------PSAGDGNQNDGPQQGPPQQGGQQQ---QG 83
DEE PPL Q Q PS +Q P PP QQQ Q
Sbjct: 915 DEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQP 974
Query: 84 PPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPP 143
PPPP +PQ PPQQ H PPP+ P Q H + P PP QG Q PP PPP
Sbjct: 975 PPPPPPQPQPPPQQQ-HQPPPRPVHLQPMQFSTHIQQP------PPPQG---QQPPHPPP 1024
Query: 144 GKPQGPPPQGGRPQ 157
G+ Q PPPQ +PQ
Sbjct: 1025 GQ-QPPPPQPAKPQ 1037
Score = 53.5 bits (127), Expect = 8e-08
Identities = 43/120 (35%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Query: 45 ERQGPPLGGQQSQPSAGDGNQNDG-PQQGPPQQGGQQQQGPPPPQGKPQGPPQ--QGGHP 101
++Q PP Q QP +Q P P Q Q PPPPQG Q PP G P
Sbjct: 971 QQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQG--QQPPHPPPGQQP 1028
Query: 102 PPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQ 161
PPPQ P P Q H PR P G ++ P P PQ Q Q PPQ
Sbjct: 1029 PPPQ--PAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQ 1086
Score = 49.7 bits (117), Expect = 1e-06
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 33 SDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQ 92
S DSE D E + P ++ P + Q Q QQ P P +P
Sbjct: 709 SSSSDSE---DSETEMAPKSKKKGHPGREQKKHHHHHHQ-------QMQQAPAPVPQQPP 758
Query: 93 GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPP 141
PPQQ PPPPQ + Q PP P PP P P Q + PPP
Sbjct: 759 PPPQQPPPPPPPQQQQQPPP-----PPPP---PSMPQQAAPAMKSSPPP 799
Score = 40.4 bits (93), Expect = 7e-04
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 15/69 (21%)
Query: 99 GHPPPPQGRPQGPPQQGGH------PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQ 152
GHP GR Q H P P +P PP QQ PPPPPP + Q PPP
Sbjct: 729 GHP----GREQKKHHHHHHQQMQQAPAPVPQQPPPPP-----QQPPPPPPPQQQQQPPPP 779
Query: 153 GGRPQGPPQ 161
P P Q
Sbjct: 780 PPPPSMPQQ 788
Score = 33.5 bits (75), Expect = 0.086
Identities = 29/97 (29%), Positives = 32/97 (32%), Gaps = 3/97 (3%)
Query: 70 QQGPPQQGGQQQQGPP---PPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQ 126
QQ PP QG Q PP PP +P P Q H P+ P G P
Sbjct: 1009 QQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMI 1068
Query: 127 GPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
PQ Q PP + P Q R Q Q
Sbjct: 1069 HSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQ 1105
Score = 32.7 bits (73), Expect = 0.15
Identities = 35/138 (25%), Positives = 44/138 (31%), Gaps = 44/138 (31%)
Query: 70 QQGPPQQGGQQQQGPPPPQGKPQG------------------PPQQGGHPPPPQGRPQGP 111
Q P Q Q PPP Q P PPQ PPP +PQ P
Sbjct: 201 QASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPP 260
Query: 112 PQQGGHPRPPRGRP---QGPPQQGGHQQG-----------------PPPPPPGKPQ---- 147
P P+P + P PQ ++G PP P +P+
Sbjct: 261 PAPA--PQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKL 318
Query: 148 GPPPQGGRPQGPPQGQSP 165
G + RP PP+ P
Sbjct: 319 GQRRESSRPVKPPKKDVP 336
Score = 32.7 bits (73), Expect = 0.15
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 116 GHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
GHP GR Q HQQ P P Q PPP P PP Q Q
Sbjct: 729 GHP----GREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQ 775
Score = 32.0 bits (71), Expect = 0.25
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 104 PQGRPQGPP--QQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQ 161
P+ + +G P +Q H + Q P Q PPP P P P Q P PP
Sbjct: 723 PKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPP 782
Query: 162 GQSPQ 166
PQ
Sbjct: 783 PSMPQ 787
Score = 30.4 bits (67), Expect = 0.73
Identities = 43/186 (23%), Positives = 49/186 (26%), Gaps = 89/186 (47%)
Query: 69 PQQGPPQQGGQQQQGPPPP--QGKPQGPPQQGGH----PPPPQGRPQGPP---QQGGHPR 119
P+ P Q PP PQ P + PP P P P Q P+
Sbjct: 843 PEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQ 902
Query: 120 PPRGRP--------------------------------------------QGPPQ----- 130
PP +P Q PP
Sbjct: 903 PPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPP 962
Query: 131 ----QGGHQQGPPPPPPGKP---------------------------QGPPPQGGRPQGP 159
Q QQ PPPPPP +P Q PPPQG +P P
Sbjct: 963 HPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHP 1022
Query: 160 PQGQSP 165
P GQ P
Sbjct: 1023 PPGQQP 1028
Score = 29.6 bits (65), Expect = 1.2
Identities = 43/190 (22%), Positives = 53/190 (27%), Gaps = 64/190 (33%)
Query: 40 QFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKP-------- 91
QF +Q PP GQQ P G Q PQ PQQ Q P + P
Sbjct: 1003 QFSTHIQQPPPPQGQQP-PHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLRE 1061
Query: 92 --------------------QGPPQQGGHP------------PPP--------------Q 105
Q PPQQ P P P +
Sbjct: 1062 APSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIR 1121
Query: 106 GRPQGPPQQGGHPRPPRG---------RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRP 156
P P + P+ P RP+ P G PP P G P + +
Sbjct: 1122 SEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQK 1181
Query: 157 QGPPQGQSPQ 166
Q P +P+
Sbjct: 1182 QEPKTPVAPK 1191
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 72.8 bits (177), Expect = 1e-13
Identities = 57/158 (36%), Positives = 64/158 (40%), Gaps = 43/158 (27%)
Query: 44 EERQGP-PLGGQQSQ-PSAGDGNQNDGPQQGPPQQGG-----QQQQGPPPPQGKPQGPPQ 96
+E +GP P GG P G Q QGPP QG Q+ +GPP Q + QGPPQ
Sbjct: 808 QEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQ-QGPPQ 866
Query: 97 QGGHPPPPQGRPQGPPQQGGHPRPPRG--------------------RPQGPPQQGGHQQ 136
G PPPQG QGPP G P RG P+ P Q G
Sbjct: 867 -GSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQST 925
Query: 137 GPPP--------------PPPGKPQGPPPQGGRPQGPP 160
GPPP PP QGP P G +GPP
Sbjct: 926 GPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPP 963
Score = 72.4 bits (176), Expect = 2e-13
Identities = 58/145 (40%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 39 EQFIDEERQGPPLGGQQSQPSAGDGNQ-NDGPQQGPPQQG---GQQQQGPPPPQG--KPQ 92
EQ G PL G Q P G +Q G QQ P Q Q GPP PQG +P
Sbjct: 570 EQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPP 629
Query: 93 GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQ------QGGHQQGPPPPPPGKP 146
GP Q G PP + G PQ P+ P+G PQG P+ G Q+ P P P P
Sbjct: 630 GPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGP 689
Query: 147 QGPP-PQGGR-------PQGPPQGQ 163
QGPP PQG PQGPP Q
Sbjct: 690 QGPPGPQGSSGPQGHMGPQGPPGPQ 714
Score = 72.0 bits (175), Expect = 2e-13
Identities = 61/147 (41%), Positives = 66/147 (44%), Gaps = 29/147 (19%)
Query: 47 QGPPLGGQQSQPSAGDGNQN-DGPQQGPPQ-------QGGQQQQGPPPPQGKPQGPP-QQ 97
QGPPL P G Q GP QG P+ QG Q+ GP P G PQGPP Q
Sbjct: 638 QGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLG-PQGPPGPQ 696
Query: 98 GGHPPPPQGRPQGPPQQGGH-----PRPPRGR--PQGPPQQGGHQQGPP-------PPPP 143
G P PQGPP GH P P+G PQGPP G QGPP PP P
Sbjct: 697 GSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQG-MQGPPGPRGMQGPPHP 755
Query: 144 GKPQGPPP----QGGRPQGPPQGQSPQ 166
QG P QG QGP G +P+
Sbjct: 756 HGIQGGPGSQGIQGPVSQGPLMGLNPR 782
Score = 68.9 bits (167), Expect = 2e-12
Identities = 67/143 (46%), Positives = 71/143 (49%), Gaps = 33/143 (23%)
Query: 47 QGP----PLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGK--PQGPP-QQGG 99
QGP P G QQ PS + Q GPP G Q Q PP PQG+ PQGPP QGG
Sbjct: 591 QGPMSQIPQGFQQPHPS--QQMPMNMAQMGPP--GPQGQFRPPGPQGQMGPQGPPLHQGG 646
Query: 100 HPPP----PQGRPQGPPQQGGHPRP-----PRGRPQGPPQQGG-HQQGPPPP-----PPG 144
P PQG PQGPPQ G PRP P+G + P G QGPP P P G
Sbjct: 647 GGPQGFMGPQG-PQGPPQ--GLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQG 703
Query: 145 K--PQG-PPPQGG-RPQGPPQGQ 163
PQG P PQG PQGPP Q
Sbjct: 704 HMGPQGPPGPQGHIGPQGPPGPQ 726
Score = 68.9 bits (167), Expect = 2e-12
Identities = 61/144 (42%), Positives = 67/144 (46%), Gaps = 30/144 (20%)
Query: 47 QGPP-----LGGQQSQPSAGDGNQ------NDGPQQGPPQQGGQQQQGPPPPQGKPQG-P 94
QGPP GG SQ G +Q N QGPP G ++ QGP P QG G P
Sbjct: 750 QGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPP--GPRENQGPAP-QGMIMGHP 806
Query: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPP-----PP-------P 142
PQ+ P PP G PQ+ P+ RG QGPP QG GPP PP P
Sbjct: 807 PQEMRGPHPPGGLLGHGPQEMRGPQEIRGM-QGPPPQGS-MLGPPQELRGPPGSQSQQGP 864
Query: 143 PGKPQGPPPQGGRPQGPPQGQSPQ 166
P GPPPQGG QGPP Q Q
Sbjct: 865 PQGSLGPPPQGG-MQGPPGPQGQQ 887
Score = 64.7 bits (156), Expect = 3e-11
Identities = 59/160 (36%), Positives = 61/160 (38%), Gaps = 45/160 (28%)
Query: 47 QGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQ-------QQGPPPPQGKPQGPPQQGG 99
QGPP P G Q QGPP G Q QGPP P G GP QG
Sbjct: 708 QGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGI 767
Query: 100 HPPPPQGRPQGPPQQGGHPRPPRGRP-----QGPPQQGGHQQGPP-----PPPPG----- 144
P QG P G +PR +G P QGP QG PP P PPG
Sbjct: 768 QGPVSQG-----PLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGH 822
Query: 145 ------------KPQGPPPQG---GRPQ---GPPQGQSPQ 166
QGPPPQG G PQ GPP QS Q
Sbjct: 823 GPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQ 862
Score = 63.9 bits (154), Expect = 6e-11
Identities = 55/132 (41%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 54 QQSQPSAGDGNQNDGPQ----QGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQG--R 107
+Q QP G GPQ QGP Q Q Q P P Q P Q G PP PQG R
Sbjct: 570 EQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMG--PPGPQGQFR 627
Query: 108 PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPG--------KPQG----PPPQGG- 154
P GP Q G PP + G PQ QGP PP G PQG P P G
Sbjct: 628 PPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPL 687
Query: 155 RPQGP--PQGQS 164
PQGP PQG S
Sbjct: 688 GPQGPPGPQGSS 699
Score = 62.0 bits (149), Expect = 2e-10
Identities = 55/150 (36%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 29 PLVISDGGDSEQFIDEERQGPPLG----GQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGP 84
P I G S+ QGP +G G Q P + NQ PQ Q+ +GP
Sbjct: 755 PHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRE-NQGPAPQGMIMGHPPQEMRGP 813
Query: 85 PPPQG-------KPQGPPQ-QGGHPPPPQGRPQGPPQQGGHP---RPPRGRPQG---PPQ 130
PP G + +GP + +G PPPQG GPPQ+ P + +G PQG PP
Sbjct: 814 HPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPP 873
Query: 131 QGGHQQGPPPPPPGKPQGPPPQGGRP-QGP 159
QGG QGPP P + Q P +G P QGP
Sbjct: 874 QGG-MQGPPGP---QGQQNPARGPHPSQGP 899
Score = 61.6 bits (148), Expect = 3e-10
Identities = 55/134 (41%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 46 RQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQG---PPPPQGK------------ 90
+ GPP Q +P G GPQ P QGG QG P PQG
Sbjct: 616 QMGPPGPQGQFRPPGPQGQM--GPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHG 673
Query: 91 PQGPPQQGGHPPPPQGRPQGPPQQGGHPRPP-RGRPQGPPQQGGH--QQGPPPPPPG-KP 146
PQG + G P P G PQGPP G P PQGPP GH QGPP P P
Sbjct: 674 PQGMQRHPG-PHGPLG-PQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGP 731
Query: 147 QGPPPQGGRPQGPP 160
QGPP G QGPP
Sbjct: 732 QGPPGTQGM-QGPP 744
Score = 58.2 bits (139), Expect = 3e-09
Identities = 51/144 (35%), Positives = 61/144 (42%), Gaps = 30/144 (20%)
Query: 44 EERQGPPLGGQQSQPSAGDGNQNDGPQ---QGPPQQGGQQQ--QGPPPPQG----KPQGP 94
+E +GPP G QSQ G+ PQ QGPP GQQ +GP P QG + Q
Sbjct: 850 QELRGPP--GSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKT 907
Query: 95 PQQGGHPPPP---QGRPQGPP-------QQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPG 144
P G P P +G+ GPP QQG R P P P Q G +G PP
Sbjct: 908 PLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGAQGRIP---PLNPGQGPGPNKGDSRGPPN 964
Query: 145 KPQGPPPQ------GGRPQGPPQG 162
GP + GG GP +G
Sbjct: 965 HHMGPMSERRHEQSGGPEHGPERG 988
Score = 55.5 bits (132), Expect = 2e-08
Identities = 51/152 (33%), Positives = 62/152 (40%), Gaps = 24/152 (15%)
Query: 35 GGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGP-PQQGG---QQQQ------GP 84
G S+Q + GPP G P G QN P +GP P QG QQQ+ GP
Sbjct: 857 GSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQN--PARGPHPSQGPIPFQQQKTPLLGDGP 914
Query: 85 PPP---QGKPQGPP-------QQGGHPP-PPQGRPQGPPQQGGHPRPPRGRPQGPPQQGG 133
P +G+ GPP QQG PP QGP G R P GP +
Sbjct: 915 RAPFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERR 974
Query: 134 HQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSP 165
H+Q P G +GP G +GPP + P
Sbjct: 975 HEQS-GGPEHGPERGPFRGGQDCRGPPDRRGP 1005
Score = 47.8 bits (112), Expect = 4e-06
Identities = 37/114 (32%), Positives = 43/114 (37%), Gaps = 11/114 (9%)
Query: 47 QGPPLGGQQSQPSAGDG--------NQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG 98
QGP QQ P GDG Q+ GP P G Q QG PP QGP
Sbjct: 897 QGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNK 956
Query: 99 GHPPPPQGRPQGPPQQGGHPR---PPRGRPQGPPQQGGHQQGPPPPPPGKPQGP 149
G P GP + H + P G +GP + G +GPP P P
Sbjct: 957 GDSRGPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFP 1010
Score = 41.6 bits (96), Expect = 3e-04
Identities = 47/150 (31%), Positives = 61/150 (40%), Gaps = 44/150 (29%)
Query: 49 PPLG-GQQSQPSAGDGN----------------QNDGPQQGP---PQQGGQQQQGPPPPQ 88
PPL GQ P+ GD Q+ GP+ GP P +GGQ +GP
Sbjct: 944 PPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGP---- 999
Query: 89 GKPQGPPQQGGHP--PPPQGRPQG--PPQQGGHP-RPPRGRPQGPPQQ-----GGHQQGP 138
P ++G HP P RP P ++ GH R GR PQ+ GG GP
Sbjct: 1000 -----PDRRGPHPDFPDDFSRPDDFHPDKRFGHRLREFEGRGGPLPQEEKWRRGG--PGP 1052
Query: 139 PPPPPGKPQGPPPQGGRPQGPP---QGQSP 165
P PP + G +GPP +G+ P
Sbjct: 1053 PFPPDHREFSEGDGRGAARGPPGAWEGRRP 1082
Score = 35.4 bits (80), Expect = 0.023
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQ--------GPPQQGGHPPPPQGRP- 108
P + + + P +GG+ + GP P Q P+ G G H P G P
Sbjct: 1239 PGTSEHREMEAPGGPSEDRGGKGRGGPGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPP 1298
Query: 109 -QGPPQQGGHPRPPRGR----PQGPPQQGGHQQG 137
G P +GG GR GPP++G + G
Sbjct: 1299 GSGTPSRGGRSGSNWGRGSNMNSGPPRRGASRGG 1332
Score = 33.9 bits (76), Expect = 0.066
Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 35 GGDSEQFIDEERQGPPLGGQQSQPSAG-----DGNQNDGPQQGPPQQGGQQQQGPPPPQG 89
GG SE + R GP G Q P +G DG +DG + P G PP G
Sbjct: 1251 GGPSEDRGGKGRGGP--GPAQRVPKSGRSSSLDGEHHDGYHRDEPFGG-------PPGSG 1301
Query: 90 KPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGR 124
P + G + GPP++G RGR
Sbjct: 1302 TPSRGGRSGSNWGRGSNMNSGPPRRGASRGGGRGR 1336
Score = 30.8 bits (68), Expect = 0.56
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 62 DGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPP--QGRPQGPPQQGGHPR 119
+G PQ+ ++GG PP + +G + PP +GR G + P
Sbjct: 1033 EGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGRRPGDERFPRDPE 1092
Query: 120 PPRGRPQGPPQQGGHQQGPPP------PPPGKPQGPPPQGGRPQ 157
PR R + ++ ++G PP PP G+ P P+ P+
Sbjct: 1093 DPRFRGR---REESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPE 1133
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 72.0 bits (175), Expect = 2e-13
Identities = 47/104 (45%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 68 GPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPR----- 122
G PP G GP PP PP G P P +P P Q G+P P
Sbjct: 11 GDNYPPPNPG--YPGGPQPPMPPYAQPPYPGAPYPQPPFQPS-PYGQPGYPHGPSPYPQG 67
Query: 123 GRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGP-PQGQSP 165
G PQGP QGG+ QG P P G PQGP PQGG PQGP PQ P
Sbjct: 68 GYPQGPYPQGGYPQG-PYPQEGYPQGPYPQGGYPQGPYPQSPFP 110
Score = 63.5 bits (153), Expect = 8e-11
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 53 GQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPP 112
GQ P G QGP QGG Q GP P +G PQGP QGG+P P + PP
Sbjct: 53 GQPGYPHGPSPYPQGGYPQGPYPQGGYPQ-GPYPQEGYPQGPYPQGGYPQGPYPQSPFPP 111
Query: 113 QQGGHPRPPRGRPQGPPQQGGHQQGPPP 140
G P+ G+ PQ G +Q+ PP
Sbjct: 112 NPYGQPQVFPGQDPDSPQHGNYQEEGPP 139
Score = 62.8 bits (151), Expect = 1e-10
Identities = 49/113 (43%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 69 PQQGPPQQGGQQQQGP--PPPQGKPQGPPQQGGHPPPPQGRPQGP-PQ----QGGHPRPP 121
P PP G Q P P P G+P P G P P G PQGP PQ QG P P
Sbjct: 31 PYAQPPYPGAPYPQPPFQPSPYGQPGYP--HGPSPYPQGGYPQGPYPQGGYPQG--PYPQ 86
Query: 122 RGRPQGPPQQGGHQQGP------PPPPPGKPQGPP------PQGG--RPQGPP 160
G PQGP QGG+ QGP PP P G+PQ P PQ G + +GPP
Sbjct: 87 EGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPP 139
Score = 62.4 bits (150), Expect = 2e-10
Identities = 41/91 (45%), Positives = 46/91 (50%), Gaps = 17/91 (18%)
Query: 84 PPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPP-RGRPQGPPQQGGHQQGPPP-P 141
PPP G P GP P PP +P P +P+PP + P G P G+ GP P P
Sbjct: 15 PPPNPGYPGGPQP----PMPPYAQPPYPGAP--YPQPPFQPSPYGQP---GYPHGPSPYP 65
Query: 142 PPGKPQGPPPQGGRPQGP------PQGQSPQ 166
G PQGP PQGG PQGP PQG PQ
Sbjct: 66 QGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQ 96
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 72.0 bits (175), Expect = 2e-13
Identities = 47/104 (45%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 68 GPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPR----- 122
G PP G GP PP PP G P P +P P Q G+P P
Sbjct: 11 GDNYPPPNPG--YPGGPQPPMPPYAQPPYPGAPYPQPPFQPS-PYGQPGYPHGPSPYPQG 67
Query: 123 GRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGP-PQGQSP 165
G PQGP QGG+ QG P P G PQGP PQGG PQGP PQ P
Sbjct: 68 GYPQGPYPQGGYPQG-PYPQEGYPQGPYPQGGYPQGPYPQSPFP 110
Score = 63.5 bits (153), Expect = 8e-11
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 53 GQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPP 112
GQ P G QGP QGG Q GP P +G PQGP QGG+P P + PP
Sbjct: 53 GQPGYPHGPSPYPQGGYPQGPYPQGGYPQ-GPYPQEGYPQGPYPQGGYPQGPYPQSPFPP 111
Query: 113 QQGGHPRPPRGRPQGPPQQGGHQQGPPP 140
G P+ G+ PQ G +Q+ PP
Sbjct: 112 NPYGQPQVFPGQDPDSPQHGNYQEEGPP 139
Score = 62.8 bits (151), Expect = 1e-10
Identities = 49/113 (43%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 69 PQQGPPQQGGQQQQGP--PPPQGKPQGPPQQGGHPPPPQGRPQGP-PQ----QGGHPRPP 121
P PP G Q P P P G+P P G P P G PQGP PQ QG P P
Sbjct: 31 PYAQPPYPGAPYPQPPFQPSPYGQPGYP--HGPSPYPQGGYPQGPYPQGGYPQG--PYPQ 86
Query: 122 RGRPQGPPQQGGHQQGP------PPPPPGKPQGPP------PQGG--RPQGPP 160
G PQGP QGG+ QGP PP P G+PQ P PQ G + +GPP
Sbjct: 87 EGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPP 139
Score = 62.4 bits (150), Expect = 2e-10
Identities = 41/91 (45%), Positives = 46/91 (50%), Gaps = 17/91 (18%)
Query: 84 PPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPP-RGRPQGPPQQGGHQQGPPP-P 141
PPP G P GP P PP +P P +P+PP + P G P G+ GP P P
Sbjct: 15 PPPNPGYPGGPQP----PMPPYAQPPYPGAP--YPQPPFQPSPYGQP---GYPHGPSPYP 65
Query: 142 PPGKPQGPPPQGGRPQGP------PQGQSPQ 166
G PQGP PQGG PQGP PQG PQ
Sbjct: 66 QGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQ 96
>gi|154448882 proline rich 4 (lacrimal) isoform 1 [Homo sapiens]
Length = 147
Score = 71.2 bits (173), Expect = 4e-13
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 5 LLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGN 64
+L S ++ DV+ ED I D DS Q D+ Q PP G +P GN
Sbjct: 18 ILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGN 77
Query: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG 98
Q+DGPQQ PP+ GG + PPPP Q PP++G
Sbjct: 78 QDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
Score = 55.1 bits (131), Expect = 3e-08
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG 154
P QG PPP+G PP G+ G Q PP+ GGH + PPPPP Q PP +G
Sbjct: 55 PDQGPQRPPPEGLLPRPPGDSGNQDD--GPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGH 112
Query: 155 RPQGPPQ 161
R P+
Sbjct: 113 RQLSLPR 119
Score = 45.8 bits (107), Expect = 2e-05
Identities = 38/112 (33%), Positives = 45/112 (40%), Gaps = 19/112 (16%)
Query: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGH 117
P D +Q P QGP + PPP+G PP G+ G Q PP+ GGH
Sbjct: 46 PDVEDSSQR--PDQGPQR---------PPPEGLLPRPPGDSGNQD--DGPQQRPPKPGGH 92
Query: 118 ----PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPP--QGGRPQGPPQGQ 163
P PP Q PP++G Q P P Q Q RP PQ Q
Sbjct: 93 HRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQ 144
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 70.5 bits (171), Expect = 6e-13
Identities = 56/168 (33%), Positives = 64/168 (38%), Gaps = 34/168 (20%)
Query: 10 LLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGP 69
+ S AQ D + S+ + GG + RQ PP PS G GP
Sbjct: 238 MCGISEAQLKDRETSKVIYDFIEKTGGVEAVKNELRRQAPP----PPPPSRG------GP 287
Query: 70 QQGPPQQGGQQQQGPPPP----QGKPQGPPQQG---GHPPPPQGRPQ----GPPQQGGHP 118
PP GPPPP +G P PP + PPPP RP PP +P
Sbjct: 288 PPPPPPP---HNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYP 344
Query: 119 RPP----RGRPQGPPQQGGHQQG------PPPPPPGKPQGPPPQGGRP 156
PP P GPP G PPPPPP P GPPP G P
Sbjct: 345 PPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLP 392
Score = 63.2 bits (152), Expect = 1e-10
Identities = 37/99 (37%), Positives = 41/99 (41%), Gaps = 24/99 (24%)
Query: 80 QQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPP---RGRPQGPPQQGGHQQ 136
++Q PPPP PP +GG PPPP PP G P PP RG P PP +
Sbjct: 273 RRQAPPPP------PPSRGGPPPPPP-----PPHNSGPPPPPARGRGAPPPPPSRAPTAA 321
Query: 137 GPPPPP----------PGKPQGPPPQGGRPQGPPQGQSP 165
PPPPP P PPP P P G P
Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPP 360
Score = 38.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 22/63 (34%), Gaps = 11/63 (17%)
Query: 73 PPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQG 132
PP GPPPP G PPPP P GPP P G P G
Sbjct: 347 PPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP-----------PPGLPSDG 395
Query: 133 GHQ 135
HQ
Sbjct: 396 DHQ 398
Score = 36.6 bits (83), Expect = 0.010
Identities = 25/72 (34%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRP 108
PP P A + GP PP G PPPP PP G PPPP
Sbjct: 338 PPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPP----PPPPPGPPPPP---- 389
Query: 109 QGPPQQGGHPRP 120
G P G H P
Sbjct: 390 -GLPSDGDHQVP 400
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 70.5 bits (171), Expect = 6e-13
Identities = 52/133 (39%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 48 GPPLGGQQSQPSAGDGNQNDG-PQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQG 106
G P G A G G P GPP GGQ PPP P GPP G PP+G
Sbjct: 300 GMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-GPPPMG---MPPRG 355
Query: 107 RPQGPPQQGGHPRPP---RGRP--------QGPPQQG--GHQQGPPPPPPGKPQGPPPQG 153
P G P P PP RG P GPP+ G+Q+GP PPP P+ P P
Sbjct: 356 PPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVP-- 413
Query: 154 GRPQGPPQGQSPQ 166
P+GP +G PQ
Sbjct: 414 --PRGPLRGPLPQ 424
Score = 69.7 bits (169), Expect = 1e-12
Identities = 54/145 (37%), Positives = 55/145 (37%), Gaps = 33/145 (22%)
Query: 49 PPLGGQQSQPSAGDGNQNDG---PQQGPPQ--QGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
PP S G G G P PP G G PP P PP GH PP
Sbjct: 217 PPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPP 276
Query: 104 PQGRP-QGPPQQGG---HPRPPRGRPQ---------------------GPPQQGGHQQGP 138
G P G P G HP PP G P GPP GG Q P
Sbjct: 277 SAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGG--QPP 334
Query: 139 PPPPPGKPQ-GPPPQGGRPQGPPQG 162
P PPPG P GPPP G P+GPP G
Sbjct: 335 PRPPPGMPHPGPPPMGMPPRGPPFG 359
Score = 62.8 bits (151), Expect = 1e-10
Identities = 49/124 (39%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 48 GPPLGGQQS--QPSAGDGNQNDGPQQGPPQQGGQQQQ----GPPPPQGKPQGPPQQGGHP 101
GPP G P G + + P G P G Q Q GP GPP GG P
Sbjct: 274 GPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQP 333
Query: 102 PP--PQGRPQ-GPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158
PP P G P GPP G PPRG P G P GH P P PP +GPPP
Sbjct: 334 PPRPPPGMPHPGPPPMG---MPPRGPPFGSPM--GH---PGPMPPHGMRGPPPL-----M 380
Query: 159 PPQG 162
PP G
Sbjct: 381 PPHG 384
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 70.5 bits (171), Expect = 6e-13
Identities = 58/155 (37%), Positives = 59/155 (38%), Gaps = 42/155 (27%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQ------QGGQQQQGPPPPQ--GKP---QGP--- 94
PP QQ QP Q PQQ PP Q QQQQ PPPPQ KP QGP
Sbjct: 63 PPPHQQQQQPPP----QQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPA 118
Query: 95 PQQGGHPPPPQGRPQGPPQQGGHP-----------------RPPRGRPQGPPQQG----G 133
P G PP P P G P PP P PP G
Sbjct: 119 PGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTP 178
Query: 134 HQQGPPPPPPGKPQGP---PPQGGRPQGPPQGQSP 165
Q G PPPPP GP P QG P GP G+ P
Sbjct: 179 PQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMP 213
Score = 70.1 bits (170), Expect = 8e-13
Identities = 58/166 (34%), Positives = 65/166 (39%), Gaps = 37/166 (22%)
Query: 35 GGDSEQFIDEERQGPP-LGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQG 93
GG + + R PP +G Q++ G G GP+ P QQQ PPPQ P
Sbjct: 21 GGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPP-- 78
Query: 94 PPQQGGHPPPP------QGRPQGPPQ--------QGGHPRPPRGR---------PQGPPQ 130
P Q H PPP Q +P PPQ QG P P G P PP
Sbjct: 79 PQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPT 138
Query: 131 QG---GHQQGP---PPP-----PPGKPQGPPPQGGRPQGPPQGQSP 165
G G GP PPP PPG P PP G P PPQ P
Sbjct: 139 SGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGP 184
Score = 65.5 bits (158), Expect = 2e-11
Identities = 52/134 (38%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPP----QGKPQGPPQQGGHPPPP 104
PP G + P +G G P PP G PPP G P PPQ GG PPPP
Sbjct: 136 PPTSG--APPGSGPG-----PTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPP 188
Query: 105 QGRP-QGP-PQQGGHPRPPRG--RPQGPPQQGGHQQGPP---PPPP----GKPQG----- 148
P GP P+QG P P+G P GP GG P P PP G+P+G
Sbjct: 189 AAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHH 248
Query: 149 PPPQGGRPQGPPQG 162
PP QGPP G
Sbjct: 249 PPYHQQHHQGPPPG 262
Score = 64.7 bits (156), Expect = 3e-11
Identities = 50/150 (33%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 37 DSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPP--------- 87
DS + + + GP G + P++ P G P G PPP
Sbjct: 105 DSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGA 164
Query: 88 -------QGKPQGPPQQGGHPPPPQGRP-QGP-PQQGGHPRPPRG--RPQGPPQQGGHQQ 136
G P PPQ GG PPPP P GP P+QG P P+G P GP GG
Sbjct: 165 PPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGL 224
Query: 137 GPP---PPPPGKPQGPPPQGGRPQGPPQGQ 163
P P PP + G P+GGR PP Q
Sbjct: 225 STPGGHPKPPHR-GGGEPRGGRQHHPPYHQ 253
Score = 62.8 bits (151), Expect = 1e-10
Identities = 39/98 (39%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHP--PPPQG 106
PP G P A GP+QGP G P GK G P+ GG P P G
Sbjct: 178 PPQAGGPPPPPAAVPGPGPGPKQGPGPGG--------PKGGKMPGGPKPGGGPGLSTPGG 229
Query: 107 RPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPG 144
P+ P + GG PR GR PP H QGPPP PG
Sbjct: 230 HPKPPHRGGGEPRG--GRQHHPPYHQQHHQGPPPGGPG 265
Score = 34.7 bits (78), Expect = 0.038
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 120 PPRG----RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
PP G + +GP G Q GP PP P PPP + Q PPQ PQ
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPP----PPPHQQQQQPPPQQPPPQ 80
Score = 30.0 bits (66), Expect = 0.95
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 77 GGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPP------QQGGHPRPPRGRPQGPPQ 130
GG G P G + PP GG + P PP G R R G
Sbjct: 615 GGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTERFGQGGAGP 674
Query: 131 QGGHQQGPPPPPPGKPQG 148
GG QGP PG P G
Sbjct: 675 VGG--QGPRGMGPGTPAG 690
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 70.1 bits (170), Expect = 8e-13
Identities = 42/102 (41%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 69 PQQGPPQQGGQQQQGPPPPQGK-----PQGPPQQGGHPPPPQGRPQGPPQQGGHPRPP-- 121
P PP +GG Q PP G P P G PPPP R PP +GG P PP
Sbjct: 314 PPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPP 373
Query: 122 ---RGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPP 160
R P PP G GPP PPP P PPP G PP
Sbjct: 374 ATGRSGPLPPPPPGAG--GPPMPPPPPPPPPPPSSGNGPAPP 413
Score = 63.5 bits (153), Expect = 8e-11
Identities = 53/148 (35%), Positives = 60/148 (40%), Gaps = 26/148 (17%)
Query: 32 ISDGGDSEQFIDEERQGPPL---------GGQQSQPSAGDGNQN-DGPQQGPPQQGGQQQ 81
I D G E E R+ PL G Q +P GN+ GP PP G
Sbjct: 294 IEDQGGLEAVRQEMRRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPL--PPVPLGI-- 349
Query: 82 QGPPPPQGKPQGPPQQGGHPPPPQ---GR----PQGPPQQGGHPRPPRGRPQGPPQQGGH 134
PPPP + PP +GG PPPP GR P PP GG P PP P PP G+
Sbjct: 350 -APPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGN 408
Query: 135 QQGPPPPPPGKPQGPPPQGGRPQGPPQG 162
P PP P P GG G +G
Sbjct: 409 G----PAPPPLPPALVPAGGLAPGGGRG 432
Score = 57.4 bits (137), Expect = 6e-09
Identities = 43/117 (36%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGH--PPPP-----QGR--PQGPPQQG 115
++ G + Q+ +Q+ PPPP PP +GG+ P PP +GR P P G
Sbjct: 295 EDQGGLEAVRQEMRRQEPLPPPP------PPSRGGNQLPRPPIVGGNKGRSGPLPPVPLG 348
Query: 116 GHPRPPRGRPQGPPQQGGHQQGPPPPPPGK-------PQGPPPQGGRPQGPPQGQSP 165
P PP P+GPP G + GPPPPPP P PP GG P PP P
Sbjct: 349 IAPPPPT--PRGPPPPG--RGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPP 401
Score = 49.7 bits (117), Expect = 1e-06
Identities = 37/109 (33%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 47 QGPP---LGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
+GPP GG P G P PP GG PPPP P PP G P P
Sbjct: 357 RGPPPPGRGGPPPPPPPATGRSGPLPPP-PPGAGGPPMPPPPPP---PPPPPSSGNGPAP 412
Query: 104 PQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQ 152
P P P G P RG +QG P P PPPQ
Sbjct: 413 PPLPPALVPAGGLAPGGGRGALLDQIRQGIQLNKTPGAPESSALQPPPQ 461
Score = 33.9 bits (76), Expect = 0.066
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Query: 70 QQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRP---- 125
Q+ +Q G ++Q PPPP P ++GG PP P P G QGG P P
Sbjct: 146 QKRNQRQSGDRRQLPPPP--TPANEERRGGLPPLPL-HPGG--DQGGPPVGPLSLGLATV 200
Query: 126 --QGPPQQGGHQQGPPPPPP 143
Q P +G P P P
Sbjct: 201 DIQNPDITSSRYRGLPAPGP 220
Score = 30.0 bits (66), Expect = 0.95
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
Query: 130 QQGGHQQGPPPPPP-------GKPQGPPPQGGRPQGPPQG 162
Q G +Q PPPP P G P P GG GPP G
Sbjct: 152 QSGDRRQLPPPPTPANEERRGGLPPLPLHPGGDQGGPPVG 191
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 70.1 bits (170), Expect = 8e-13
Identities = 48/128 (37%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 35 GGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGP 94
GG S+Q + + +G + ++ G P Q PP +GG PPPP G+ P
Sbjct: 135 GGPSQQVMTPQGRGTVAAAAAAATASIAG----APTQYPPGRGG-----PPPPMGRGAPP 185
Query: 95 PQQGGHPP---PPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPP 151
P G PP PP G P G P P RG P G P G PPPPG +GPPP
Sbjct: 186 PGMMGPPPGMRPPMGPPMGIP-------PGRGTPMGMPPPGMR-----PPPPGM-RGPPP 232
Query: 152 QGGRPQGP 159
G RP P
Sbjct: 233 PGMRPPRP 240
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 66.2 bits (160), Expect = 1e-11
Identities = 49/141 (34%), Positives = 55/141 (39%), Gaps = 29/141 (20%)
Query: 45 ERQGPPLGGQQSQPSAGDGNQND-----------GPQQGPPQQGGQQQQGPPPPQGKPQG 93
E P G +Q S GDG D GP+ +G +GPP PQG P
Sbjct: 174 EDPAPLWGPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPGS 233
Query: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPP-------------P 140
P + G P + P GPP G P PP P GPP Q G P P
Sbjct: 234 PGRAGAVGTPGERGPPGPPGPPGPPGPP--APVGPPHARISQHGDPLLSNTFTETNNHWP 291
Query: 141 PPPGKPQGPP-PQGGRPQGPP 160
P P GPP P G P GPP
Sbjct: 292 QGPTGPPGPPGPMG--PPGPP 310
Score = 49.7 bits (117), Expect = 1e-06
Identities = 54/168 (32%), Positives = 63/168 (37%), Gaps = 24/168 (14%)
Query: 19 LDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQP-SAGDGNQNDGP-QQGPPQQ 76
L + V +P GD+ +GPP G Q P S G P ++GPP
Sbjct: 194 LQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPP--GPQGPPGSPGRAGAVGTPGERGPPGP 251
Query: 77 GGQQ-QQGPPPPQGKPQGPPQQGGHPPP-----------PQGR--PQGPPQQGGHPRPPR 122
G GPP P G P Q G P PQG P GPP G P PP
Sbjct: 252 PGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPG 311
Query: 123 GRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG----RPQGPPQGQSPQ 166
P G P GH P P P G P + G R + PQG + Q
Sbjct: 312 --PTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQ 357
Score = 45.8 bits (107), Expect = 2e-05
Identities = 39/116 (33%), Positives = 45/116 (38%), Gaps = 35/116 (30%)
Query: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRP--------------QGP--PQQGGHPRPPRGR 124
+Q PP P+ P G PPP QG P GP P+ R P G
Sbjct: 163 EQPVPPTPATPEDPAPLWG-PPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGM 221
Query: 125 -----PQGPPQQGGH--------QQGPP-PPPPGKPQGPPPQGGRPQGPPQGQSPQ 166
PQGPP G ++GPP PP P P GPP P GPP + Q
Sbjct: 222 RGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPP----APVGPPHARISQ 273
Score = 44.7 bits (104), Expect = 4e-05
Identities = 35/85 (41%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 66 NDGPQ--QGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHP--RPP 121
N PQ GPP G GPP P G P G P GH PP P GP GHP +
Sbjct: 288 NHWPQGPTGPPGPPGPM--GPPGPPG-PTGVPGSPGHIGPP--GPTGPKGISGHPGEKGE 342
Query: 122 RGRPQGPPQQGGHQQGPPPPPPGKP 146
RG P QG Q P P G P
Sbjct: 343 RGLRGEPGPQGSAGQRGEPGPKGDP 367
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/86 (40%), Positives = 37/86 (43%), Gaps = 19/86 (22%)
Query: 79 QQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGH---- 134
Q GPP P G P GPP PP P G P P GH PP P GP GH
Sbjct: 292 QGPTGPPGPPG-PMGPP----GPPGPTGVPGSP----GHIGPP--GPTGPKGISGHPGEK 340
Query: 135 -QQGPPPPPPGKPQGPPPQGGRPQGP 159
++G P PQG Q G P GP
Sbjct: 341 GERGLRGEP--GPQGSAGQRGEP-GP 363
>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
[Homo sapiens]
Length = 387
Score = 65.5 bits (158), Expect = 2e-11
Identities = 58/136 (42%), Positives = 64/136 (47%), Gaps = 29/136 (21%)
Query: 46 RQGPPLGGQQSQPSAGDGNQNDGPQQGPPQ------------QGGQQQ---QGPPPPQGK 90
+QGPP + GD + G QGPP+ Q GQQQ QGPPP QG
Sbjct: 257 QQGPPQQYSGQEDYYGDQYSHGG--QGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGY 314
Query: 91 P---QGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQ 147
P Q P Q G+P QG GP Q G P+ P PQG QQ G G P PG PQ
Sbjct: 315 PPQQQQYPGQQGYPGQQQG--YGPSQGGPGPQYP-NYPQGQGQQYG---GYRPTQPGPPQ 368
Query: 148 GPPPQGGRPQGPPQGQ 163
PP Q RP G QGQ
Sbjct: 369 -PPQQ--RPYGYDQGQ 381
Score = 54.7 bits (130), Expect = 4e-08
Identities = 65/187 (34%), Positives = 70/187 (37%), Gaps = 69/187 (36%)
Query: 47 QGPPLGGQQSQPSAGDGNQNDGPQ--------QGP-------------PQQGGQQQQGPP 85
Q P+ Q + S G N GP+ QGP PQ GGQ QG
Sbjct: 171 QSMPVQNQMTM-SQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQ 229
Query: 86 PPQGKPQGPPQQGGHP------PPPQGRPQGPPQQ-------------GGHPRPPRGR-- 124
PP G G QG H PP + QGPPQQ G PP G
Sbjct: 230 PPMGM-MGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQ 288
Query: 125 ---PQGPPQQGGHQ---QGPPP----PP-----------PGKPQG-PPPQGG-RPQGP-- 159
P G Q G Q QGPPP PP PG+ QG P QGG PQ P
Sbjct: 289 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNY 348
Query: 160 PQGQSPQ 166
PQGQ Q
Sbjct: 349 PQGQGQQ 355
Score = 44.3 bits (103), Expect = 5e-05
Identities = 53/180 (29%), Positives = 60/180 (33%), Gaps = 64/180 (35%)
Query: 48 GPPLGGQQSQPSAGDGNQNDGPQQGP-PQQ------------------GGQQQQGPPP-- 86
GPP Q+Q + N P QGP P Q GG P
Sbjct: 113 GPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQS 172
Query: 87 ---------PQGKPQG----------PPQQGG--HPPPPQ---GRPQGPPQQGGHPRPPR 122
QG+P G P QG H PP PQG Q +PP
Sbjct: 173 MPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPM 232
Query: 123 GRPQGPPQQGGHQQGPPPPPPGKP--QGPPPQ--------------GGRPQGPPQGQSPQ 166
G G QG H G PP +P QGPP Q GG QGPP+G + Q
Sbjct: 233 GM-MGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGG--QGPPEGMNQQ 289
Score = 34.7 bits (78), Expect = 0.038
Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 85 PPPQGKPQGP--PQQGGHPPPPQGR--PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPP 140
PP Q P GP Q G PPPP+ P GG P P Q G GP
Sbjct: 78 PPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQN-----QMNGQMPGPNH 132
Query: 141 PPPGKPQGPPP 151
P QGP P
Sbjct: 133 MP---MQGPGP 140
Score = 33.1 bits (74), Expect = 0.11
Identities = 32/112 (28%), Positives = 35/112 (31%), Gaps = 14/112 (12%)
Query: 62 DGNQN------DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQ---GGHPPPPQGRPQGPP 112
D NQN P Q P G Q PPP + P GG PP P + Q
Sbjct: 66 DSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQ--- 122
Query: 113 QQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQS 164
G P P QGP + P G GG P QS
Sbjct: 123 MNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHG--SMGGYNHSVPSSQS 172
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 65.5 bits (158), Expect = 2e-11
Identities = 56/152 (36%), Positives = 69/152 (45%), Gaps = 36/152 (23%)
Query: 39 EQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPP-PQGK-----PQ 92
+Q ++++++G +GGQQ+ P G ++ Q P Q Q + P P PQG
Sbjct: 549 QQKLEQQQRG--MGGQQAPPGLGPILED----QARPSQNLLQLRPPQPQPQGTVGASGAT 602
Query: 93 GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRG--RPQGP---PQQGGHQQGPPPP------ 141
G PQ G PP G PQGPP P PP RPQ P PQ PPPP
Sbjct: 603 GQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPP 662
Query: 142 ---------PPGKPQ--GPPPQG-GRPQ-GPP 160
PPG P PP QG G+PQ GPP
Sbjct: 663 PQASLHHLQPPGAPALLPPPHQGLGQPQLGPP 694
Score = 56.2 bits (134), Expect = 1e-08
Identities = 47/123 (38%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQ-----GPPPPQGKPQGPPQQGGHPPP 103
PP G Q P A G GP P G Q PPPPQ PPQ H
Sbjct: 613 PPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVP-PPQASLHHLQ 671
Query: 104 PQGRPQ--GPPQQG-GHPR--PPRGRPQGPPQQGGHQQGPPPPP-------PGKPQGPPP 151
P G P PP QG G P+ PP P PP Q Q PP P G P+GP P
Sbjct: 672 PPGAPALLPPPHQGLGQPQLGPPLLHP--PPAQSWPAQLPPRAPLPGQMLLSGGPRGPVP 729
Query: 152 QGG 154
Q G
Sbjct: 730 QPG 732
Score = 54.7 bits (130), Expect = 4e-08
Identities = 50/149 (33%), Positives = 56/149 (37%), Gaps = 37/149 (24%)
Query: 37 DSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQ 96
D F++ RQ Q Q + G QQ PP G + P Q Q
Sbjct: 529 DQSGFVNGIRQVITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQ---- 584
Query: 97 QGGHPPPPQGRPQ---------GPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPP------ 141
PPQ +PQ G PQ G +PP G PQGPP G GPPPP
Sbjct: 585 ----LRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPP---GAASGPPPPGPILRP 637
Query: 142 --PPGKPQ-------GPPPQGGRPQGPPQ 161
P PQ PPPQ G P PPQ
Sbjct: 638 QNPGANPQLRSLLLNPPPPQTGVP--PPQ 664
Score = 37.4 bits (85), Expect = 0.006
Identities = 34/106 (32%), Positives = 38/106 (35%), Gaps = 23/106 (21%)
Query: 79 QQQQGPPPPQGKPQGP-----PQQGGHPPPPQGRPQG----------------PPQQGGH 117
Q +Q P P P G PQQ P PPQ + G Q+ G
Sbjct: 240 QSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG- 298
Query: 118 PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
PR P P QQ GPP PQ PP G P+ PP Q
Sbjct: 299 -LGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQ 343
Score = 32.7 bits (73), Expect = 0.15
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQ-GPPQQGGHPRPPRG 123
Q P GPP Q PP P G P+ PPP +P G P
Sbjct: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAPK---------PPPASQPSLVSTVAPGSGLAPTA 360
Query: 124 RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGR 155
+P P G G P G P GG+
Sbjct: 361 QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQ 392
Score = 28.1 bits (61), Expect = 3.6
Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 11/88 (12%)
Query: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQG---PPQQGGHPRPPRGRPQGPPQQGGHQQG 137
++ PP +P PP P +G P G P P + + P
Sbjct: 196 EKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPL-------- 247
Query: 138 PPPPPPGKPQGPPPQGGRPQGPPQGQSP 165
PP P G PQ P PPQ Q P
Sbjct: 248 PPAAPSGATLSAAPQQPLPPVPPQYQVP 275
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 64.7 bits (156), Expect = 3e-11
Identities = 48/137 (35%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 52 GGQQSQP-----SAGDGNQNDGPQQGPPQ-------QGGQQQQ----GPPPPQGKPQGPP 95
G +S+P G G GP P GG Q GPPPP +P PP
Sbjct: 372 GPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
Query: 96 Q-QGGHPPPPQGRPQGPPQQGGHP------RPPRGRPQGPPQQGGHQQGPPPPPPGKPQG 148
QG HPP G P G P R +G+ PP G PPPPP G+P
Sbjct: 432 MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP- 490
Query: 149 PPPQGGRPQGPPQGQSP 165
PPP G P Q Q P
Sbjct: 491 PPPSGPLPPWQQQQQQP 507
Score = 57.4 bits (137), Expect = 6e-09
Identities = 40/116 (34%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 29 PLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQ 88
PL GG + GPP Q P + + GPP Q P
Sbjct: 400 PLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMD-QYLGSTPVGS 458
Query: 89 GKPQGPPQQGGHPPPPQGR-PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPP 143
G + +G PPPP G P PP G P PP P PP Q QQ PPPPPP
Sbjct: 459 GVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPL-PPWQQQQQQPPPPPPP 513
Score = 55.8 bits (133), Expect = 2e-08
Identities = 47/150 (31%), Positives = 50/150 (33%), Gaps = 37/150 (24%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQ--------QGGH 100
PP S + N GP + P G GP P G P P GGH
Sbjct: 353 PPPPSLMSTTQSRPPWMNSGPSESRPYHG-MHGGGPGGPGGGPHSFPHPLPSLTGGHGGH 411
Query: 101 PPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP---------------------- 138
P Q P GPP P PP QGP G H P
Sbjct: 412 PM--QHNPNGPPPPWMQP-PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKG 468
Query: 139 --PPPPPG-KPQGPPPQGGRPQGPPQGQSP 165
PPPP G P PPP G+P PP G P
Sbjct: 469 MMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 64.7 bits (156), Expect = 3e-11
Identities = 48/137 (35%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 52 GGQQSQP-----SAGDGNQNDGPQQGPPQ-------QGGQQQQ----GPPPPQGKPQGPP 95
G +S+P G G GP P GG Q GPPPP +P PP
Sbjct: 372 GPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
Query: 96 Q-QGGHPPPPQGRPQGPPQQGGHP------RPPRGRPQGPPQQGGHQQGPPPPPPGKPQG 148
QG HPP G P G P R +G+ PP G PPPPP G+P
Sbjct: 432 MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP- 490
Query: 149 PPPQGGRPQGPPQGQSP 165
PPP G P Q Q P
Sbjct: 491 PPPSGPLPPWQQQQQQP 507
Score = 57.4 bits (137), Expect = 6e-09
Identities = 40/116 (34%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 29 PLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQ 88
PL GG + GPP Q P + + GPP Q P
Sbjct: 400 PLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMD-QYLGSTPVGS 458
Query: 89 GKPQGPPQQGGHPPPPQGR-PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPP 143
G + +G PPPP G P PP G P PP P PP Q QQ PPPPPP
Sbjct: 459 GVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPL-PPWQQQQQQPPPPPPP 513
Score = 55.8 bits (133), Expect = 2e-08
Identities = 47/150 (31%), Positives = 50/150 (33%), Gaps = 37/150 (24%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQ--------QGGH 100
PP S + N GP + P G GP P G P P GGH
Sbjct: 353 PPPPSLMSTTQSRPPWMNSGPSESRPYHG-MHGGGPGGPGGGPHSFPHPLPSLTGGHGGH 411
Query: 101 PPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP---------------------- 138
P Q P GPP P PP QGP G H P
Sbjct: 412 PM--QHNPNGPPPPWMQP-PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKG 468
Query: 139 --PPPPPG-KPQGPPPQGGRPQGPPQGQSP 165
PPPP G P PPP G+P PP G P
Sbjct: 469 MMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
Score = 48.9 bits (115), Expect = 2e-06
Identities = 46/141 (32%), Positives = 50/141 (35%), Gaps = 38/141 (26%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGP--PQQGGQQQQGPPPPQGKPQG-----PPQQG--- 98
PP G P Q P GP P Q QQQ PPPP P QQ
Sbjct: 472 PPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTT 531
Query: 99 -------GHPPPPQGRPQ------GPPQQGGHPR----PPRGRPQGPPQQGGHQQGPPPP 141
G PP Q + G PQ G+P PP +P PP PPPP
Sbjct: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG------APPPP 585
Query: 142 PPGKPQGPPPQGGRPQGPPQG 162
PP PPP PP+G
Sbjct: 586 PP-----PPPGSAGMMIPPRG 601
Score = 35.0 bits (79), Expect = 0.029
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 49 PPLGGQQSQPSAGDG--NQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQG 106
PP QQ+ +A G P P G Q P P P PP G PP+G
Sbjct: 542 PPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPRG 601
Query: 107 RPQGPPQQGGHPRPPRGRPQGPPQQ 131
+ PRP P PQQ
Sbjct: 602 GDGPSHESEDFPRPLVTLPGRQPQQ 626
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 64.7 bits (156), Expect = 3e-11
Identities = 48/137 (35%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 52 GGQQSQP-----SAGDGNQNDGPQQGPPQ-------QGGQQQQ----GPPPPQGKPQGPP 95
G +S+P G G GP P GG Q GPPPP +P PP
Sbjct: 372 GPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
Query: 96 Q-QGGHPPPPQGRPQGPPQQGGHP------RPPRGRPQGPPQQGGHQQGPPPPPPGKPQG 148
QG HPP G P G P R +G+ PP G PPPPP G+P
Sbjct: 432 MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP- 490
Query: 149 PPPQGGRPQGPPQGQSP 165
PPP G P Q Q P
Sbjct: 491 PPPSGPLPPWQQQQQQP 507
Score = 57.4 bits (137), Expect = 6e-09
Identities = 40/116 (34%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 29 PLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQ 88
PL GG + GPP Q P + + GPP Q P
Sbjct: 400 PLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMD-QYLGSTPVGS 458
Query: 89 GKPQGPPQQGGHPPPPQGR-PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPP 143
G + +G PPPP G P PP G P PP P PP Q QQ PPPPPP
Sbjct: 459 GVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPL-PPWQQQQQQPPPPPPP 513
Score = 55.8 bits (133), Expect = 2e-08
Identities = 47/150 (31%), Positives = 50/150 (33%), Gaps = 37/150 (24%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQ--------QGGH 100
PP S + N GP + P G GP P G P P GGH
Sbjct: 353 PPPPSLMSTTQSRPPWMNSGPSESRPYHG-MHGGGPGGPGGGPHSFPHPLPSLTGGHGGH 411
Query: 101 PPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP---------------------- 138
P Q P GPP P PP QGP G H P
Sbjct: 412 PM--QHNPNGPPPPWMQP-PPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKG 468
Query: 139 --PPPPPG-KPQGPPPQGGRPQGPPQGQSP 165
PPPP G P PPP G+P PP G P
Sbjct: 469 MMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
Score = 48.1 bits (113), Expect = 3e-06
Identities = 45/144 (31%), Positives = 48/144 (33%), Gaps = 33/144 (22%)
Query: 49 PPLGGQQSQPSAGDGNQNDGPQQGP--PQQGGQQQQGPPPPQGKPQG-----PPQQG--- 98
PP G P Q P GP P Q QQQ PPPP P QQ
Sbjct: 472 PPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTT 531
Query: 99 -------GHPPPPQGRPQ------GPPQQGGHPR----PPRGRPQGPPQQGGHQQGPPPP 141
G PP Q + G PQ G+P PP +P PP PPPP
Sbjct: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG------APPPP 585
Query: 142 PPGKPQGPPPQGGRPQGPPQGQSP 165
PP P P PP P
Sbjct: 586 PPPPPGSAGMMYAPPPPPPPPMDP 609
Score = 44.3 bits (103), Expect = 5e-05
Identities = 43/125 (34%), Positives = 46/125 (36%), Gaps = 30/125 (24%)
Query: 50 PLGGQQSQP----SAGDGNQNDGPQQ--------GPPQQGGQQQQGPPPPQGKPQGPPQQ 97
PL QQ+ SAG G+ QQ G PQ G P PP +P PP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPP-- 579
Query: 98 GGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQ----QGGHQQG------PPPPPPGKPQ 147
G PPPP P G P PP P P G G PP PPP
Sbjct: 580 -GAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPP---- 634
Query: 148 GPPPQ 152
PPPQ
Sbjct: 635 -PPPQ 638
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,309,310
Number of Sequences: 37866
Number of extensions: 1695516
Number of successful extensions: 44796
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 1573
Number of HSP's that attempted gapping in prelim test: 7444
Number of HSP's gapped (non-prelim): 15552
length of query: 166
length of database: 18,247,518
effective HSP length: 95
effective length of query: 71
effective length of database: 14,650,248
effective search space: 1040167608
effective search space used: 1040167608
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.