Guide to the Human Genome
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Name: NSUN2 Sequence: fasta or formatted (767aa) NCBI GI: 39995082
Description:

NOL1/NOP2/Sun domain family, member 2

Referenced in:

Nucleus and Nucleolus
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         43           2
 C cysteine            1.8         14           1
 D aspartate           5.3         41           2
 E glutamate           8.5         65           2
 F phenylalanine       3.4         26           2
 G glycine             6.9         53           3
 H histidine           2.6         20           2
 I isoleucine          4.7         36           2
 K lysine              7.4         57           3
 L leucine             9.6         74           3
 M methionine          2.7         21           2
 N asparagine          4.2         32           2
 P proline             7.3         56           3
 Q glutamine           4.0         31           4
 R arginine            5.5         42           2
 S serine              6.3         48           2
 T threonine           5.0         38           2
 V valine              5.3         41           2
 W tryptophan          1.7         13           1
 Y tyrosine            2.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NOL1/NOP2/Sun domain family, member 2 
NOP2                  0.041   nucleolar protein 1, 120kDa 
NOP2                  0.041   nucleolar protein 1, 120kDa 
NSUN6                 0.037   NOL1/NOP2/Sun domain family, member 6 
NSUN3                 0.032   NOL1/NOP2/Sun domain family, member 3 
NSUN5                 0.032   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5                 0.032   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...
NSUN4                 0.027   NOL1/NOP2/Sun domain family 4 protein 
NSUN5C                0.015   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.015   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.012   NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...
NSUN5B                0.008   NOL1/NOP2/Sun domain family, member 5B 
NSUN5B                0.008   NOL1/NOP2/Sun domain family, member 5B 
NSUN5B                0.008   NOL1/NOP2/Sun domain family, member 5B 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
SRCAP                 0.006   Snf2-related CBP activator protein 
C14orf45              0.005   hypothetical protein LOC80127 
LOC730351             0.005   PREDICTED: hypothetical protein 
LOC730351             0.005   PREDICTED: hypothetical protein 
LOC730351             0.005   PREDICTED: hypothetical protein 
LOC730351             0.005   PREDICTED: hypothetical protein 
CAMTA1                0.005   calmodulin-binding transcription activator 1 
FAM117B               0.005   amyotrophic lateral sclerosis 2 (juvenile) chromosom...
FAM9A                 0.005   family with sequence similarity 9, member A 
BSN                   0.004   bassoon protein 
FAM65B                0.004   hypothetical protein LOC9750 isoform 2 
FAM65B                0.004   hypothetical protein LOC9750 isoform 1 
LOC728317             0.004   PREDICTED: hypothetical protein 
LOC728317             0.004   PREDICTED: hypothetical protein 
LOC728317             0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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