Guide to the Human Genome
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Name: BTLA Sequence: fasta or formatted (241aa) NCBI GI: 145580619
Description:

B and T lymphocyte associated isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {289aa} B and T lymphocyte associated isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         11           1
 C cysteine            3.7          9           1
 D aspartate           4.1         10           1
 E glutamate           8.3         20           2
 F phenylalanine       3.7          9           2
 G glycine             5.0         12           1
 H histidine           2.9          7           1
 I isoleucine          5.4         13           1
 K lysine              5.4         13           1
 L leucine             9.5         23           2
 M methionine          1.2          3           1
 N asparagine          7.1         17           1
 P proline             5.0         12           1
 Q glutamine           3.7          9           1
 R arginine            4.1         10           1
 S serine              9.1         22           1
 T threonine           5.8         14           2
 V valine              5.8         14           1
 W tryptophan          1.7          4           1
 Y tyrosine            3.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B and T lymphocyte associated isoform 2 
BTLA                  0.952   B and T lymphocyte associated isoform 1 
TTN                   0.029   titin isoform N2-A 
TTN                   0.021   titin isoform novex-3 
LOC653882             0.021   PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline...
MYLK                  0.017   myosin light chain kinase isoform 3A 
MYLK                  0.017   myosin light chain kinase isoform 1 
HSPG2                 0.017   heparan sulfate proteoglycan 2 
KIT                   0.015   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge...
KIT                   0.015   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
MYLK                  0.015   myosin light chain kinase isoform 3B 
MYLK                  0.015   myosin light chain kinase isoform 2 
ABCA5                 0.015   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.015   ATP-binding cassette, sub-family A , member 5 
MXRA5                 0.015   adlican 
FGFBP1                0.015   fibroblast growth factor binding protein 1 
HMCN1                 0.013   hemicentin 1 
KAZALD1               0.010   Kazal-type serine peptidase inhibitor domain 1 precu...
PITRM1                0.010   metalloprotease 1 
KIAA0408              0.010   hypothetical protein LOC9729 
LOC729792             0.010   PREDICTED: hypothetical protein 
LOC729792             0.010   PREDICTED: hypothetical protein 
LOC729792             0.010   PREDICTED: hypothetical protein 
LOC100294501          0.010   PREDICTED: hypothetical protein 
LOC100294249          0.010   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.010   PREDICTED: hypothetical protein 
LOC100294204          0.010   PREDICTED: hypothetical protein 
LOC100294136          0.010   PREDICTED: hypothetical protein 
LOC100294091          0.010   PREDICTED: hypothetical protein 
LOC730401             0.010   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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