Guide to the Human Genome
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Name: TGM5 Sequence: fasta or formatted (638aa) NCBI GI: 4759230
Description:

transglutaminase 5 isoform 2

Referenced in:

Transglutaminases

Other entries for this name:
alt prot [720aa] transglutaminase 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         32           2
 C cysteine            2.4         15           2
 D aspartate           6.3         40           2
 E glutamate           4.7         30           2
 F phenylalanine       4.1         26           1
 G glycine             6.0         38           2
 H histidine           1.7         11           2
 I isoleucine          5.6         36           2
 K lysine              5.6         36           3
 L leucine             9.1         58           2
 M methionine          1.9         12           1
 N asparagine          5.8         37           2
 P proline             4.9         31           2
 Q glutamine           6.4         41           2
 R arginine            4.2         27           2
 S serine              8.6         55           2
 T threonine           4.9         31           1
 V valine              7.4         47           2
 W tryptophan          1.9         12           1
 Y tyrosine            3.6         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transglutaminase 5 isoform 2 
TGM5                  0.903   transglutaminase 5 isoform 1 
TGM7                  0.403   transglutaminase 7 
TGM3                  0.390   transglutaminase 3 precursor 
TGM6                  0.388   transglutaminase 6 
TGM2                  0.330   transglutaminase 2 isoform a 
TGM2                  0.282   transglutaminase 2 isoform b 
TGM1                  0.282   transglutaminase 1 
F13A1                 0.261   coagulation factor XIII A1 subunit precursor 
TGM4                  0.241   transglutaminase 4 (prostate) 
EPB42                 0.212   erythrocyte membrane protein band 4.2 isoform 2 [Ho...
EPB42                 0.212   erythrocyte membrane protein band 4.2 isoform 1 [Ho...
CRB1                  0.008   crumbs homolog 1 precursor 
KIAA1210              0.006   hypothetical protein LOC57481 
UBE2D1                0.005   ubiquitin-conjugating enzyme E2D 1 
PPP2R5B               0.005   beta isoform of regulatory subunit B56, protein phosp...
HSPA4L                0.005   heat shock 70kDa protein 4-like 
SAPS1                 0.005   SAPS domain family, member 1 
HSPA4                 0.004   heat shock 70kDa protein 4 
SYNE2                 0.004   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.004   spectrin repeat containing, nuclear envelope 2 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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