Guide to the Human Genome
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Name: TGM2 Sequence: fasta or formatted (548aa) NCBI GI: 39777599
Description:

transglutaminase 2 isoform b

Referenced in:

Transglutaminases

Other entries for this name:
alt prot [687aa] transglutaminase 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         33           2
 C cysteine            3.5         19           2
 D aspartate           6.0         33           2
 E glutamate           7.3         40           3
 F phenylalanine       4.0         22           1
 G glycine             7.8         43           1
 H histidine           2.0         11           2
 I isoleucine          4.4         24           1
 K lysine              3.6         20           1
 L leucine             8.9         49           3
 M methionine          1.6          9           1
 N asparagine          5.3         29           2
 P proline             4.0         22           1
 Q glutamine           4.0         22           2
 R arginine            5.8         32           2
 S serine              6.8         37           2
 T threonine           5.3         29           2
 V valine              7.5         41           2
 W tryptophan          2.6         14           1
 Y tyrosine            3.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transglutaminase 2 isoform b 
TGM2                  0.980   transglutaminase 2 isoform a 
TGM5                  0.408   transglutaminase 5 isoform 1 
TGM7                  0.393   transglutaminase 7 
TGM6                  0.370   transglutaminase 6 
TGM3                  0.350   transglutaminase 3 precursor 
F13A1                 0.328   coagulation factor XIII A1 subunit precursor 
TGM5                  0.323   transglutaminase 5 isoform 2 
TGM1                  0.321   transglutaminase 1 
TGM4                  0.284   transglutaminase 4 (prostate) 
EPB42                 0.269   erythrocyte membrane protein band 4.2 isoform 2 [Ho...
EPB42                 0.267   erythrocyte membrane protein band 4.2 isoform 1 [Ho...
AARS2                 0.005   alanyl-tRNA synthetase 2, mitochondrial 
SCG2                  0.004   secretogranin II precursor 
LAMB2                 0.004   laminin, beta 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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