Guide to the Human Genome
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Name: PPP2CB Sequence: fasta or formatted (309aa) NCBI GI: 4758952
Description:

protein phosphatase 2, catalytic subunit, beta isoform

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt mRNA [309aa] protein phosphatase 2, catalytic subunit, beta isoform
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         13           2
 C cysteine            3.2         10           1
 D aspartate           8.1         25           2
 E glutamate           6.1         19           1
 F phenylalanine       4.5         14           1
 G glycine             7.4         23           2
 H histidine           3.2         10           1
 I isoleucine          3.9         12           1
 K lysine              3.6         11           1
 L leucine            10.0         31           2
 M methionine          1.9          6           1
 N asparagine          4.5         14           1
 P proline             4.5         14           1
 Q glutamine           4.5         14           1
 R arginine            6.5         20           2
 S serine              3.9         12           1
 T threonine           6.1         19           1
 V valine              6.8         21           2
 W tryptophan          1.6          5           1
 Y tyrosine            5.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 2, catalytic subunit, beta isofor... 
PPP2CB                1.000   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CA                0.978   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP4C                 0.656   protein phosphatase 4, catalytic subunit 
PPP6C                 0.556   protein phosphatase 6, catalytic subunit isoform b [H...
PPP6C                 0.529   protein phosphatase 6, catalytic subunit isoform a ...
PPP6C                 0.480   protein phosphatase 6, catalytic subunit isoform c ...
PPP1CC                0.441   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP1CA                0.436   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CA                0.436   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP1CB                0.420   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.420   protein phosphatase 1, catalytic subunit, beta isofor...
LOC100128362          0.393   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.390   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.390   PREDICTED: similar to protein phosphatase 2, cataly...
PPP1CA                0.390   protein phosphatase 1, catalytic subunit, alpha isof...
PPP5C                 0.333   protein phosphatase 5, catalytic subunit 
PPP3CA                0.320   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.320   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CB                0.314   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.314   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.314   protein phosphatase 3, catalytic subunit, beta isofo...
PPP3CA                0.309   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CC                0.301   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPEF1                 0.195   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.177   protein phosphatase with EF hand calcium-binding dom...
PPEF2                 0.135   serine/threonine protein phosphatase with EF-hand mo...
PPEF1                 0.124   protein phosphatase with EF hand calcium-binding dom...
LOC727927             0.006   PREDICTED: similar to phosphodiesterase 4D interact...
SGMS1                 0.006   sphingomyelin synthase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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