Guide to the Human Genome
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Name: PPP2CA Sequence: fasta or formatted (309aa) NCBI GI: 4506017
Description:

protein phosphatase 2, catalytic subunit, alpha isoform

Referenced in:

Serine / Threonine Protein Phosphatases
Tripartite Motif Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         12           2
 C cysteine            3.2         10           1
 D aspartate           7.8         24           2
 E glutamate           6.5         20           1
 F phenylalanine       4.5         14           1
 G glycine             7.4         23           2
 H histidine           3.2         10           1
 I isoleucine          4.2         13           1
 K lysine              3.9         12           1
 L leucine            10.0         31           2
 M methionine          1.9          6           1
 N asparagine          3.9         12           1
 P proline             4.2         13           1
 Q glutamine           4.5         14           1
 R arginine            6.5         20           2
 S serine              4.9         15           1
 T threonine           5.8         18           1
 V valine              6.8         21           2
 W tryptophan          1.6          5           1
 Y tyrosine            5.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 2, catalytic subunit, alpha isofo... 
PPP2CB                0.982   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.982   protein phosphatase 2, catalytic subunit, beta isofor...
PPP4C                 0.658   protein phosphatase 4, catalytic subunit 
PPP6C                 0.553   protein phosphatase 6, catalytic subunit isoform b [H...
PPP6C                 0.525   protein phosphatase 6, catalytic subunit isoform a ...
PPP6C                 0.476   protein phosphatase 6, catalytic subunit isoform c ...
PPP1CC                0.433   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP1CA                0.430   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CA                0.430   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP1CB                0.417   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.417   protein phosphatase 1, catalytic subunit, beta isofor...
LOC100128362          0.400   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.396   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.396   PREDICTED: similar to protein phosphatase 2, cataly...
PPP1CA                0.385   protein phosphatase 1, catalytic subunit, alpha isof...
PPP5C                 0.328   protein phosphatase 5, catalytic subunit 
PPP3CA                0.317   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.317   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CB                0.309   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.309   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.309   protein phosphatase 3, catalytic subunit, beta isofo...
PPP3CA                0.307   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CC                0.298   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPEF1                 0.189   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.172   protein phosphatase with EF hand calcium-binding dom...
PPEF2                 0.129   serine/threonine protein phosphatase with EF-hand mo...
PPEF1                 0.119   protein phosphatase with EF hand calcium-binding dom...
LOC727927             0.006   PREDICTED: similar to phosphodiesterase 4D interact...
SPEF2                 0.006   KPL2 protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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