Guide to the Human Genome
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Name: PPP3CA Sequence: fasta or formatted (521aa) NCBI GI: 6715568
Description:

protein phosphatase 3, catalytic subunit, alpha isoform isoform 1

Referenced in:

Calmodulin and Calcium
Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [511aa] protein phosphatase 3, catalytic subunit, alpha isoform isoform 2
alt prot [469aa] protein phosphatase 3, catalytic subunit, alpha isoform isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         35           3
 C cysteine            2.3         12           1
 D aspartate           6.1         32           2
 E glutamate           7.1         37           2
 F phenylalanine       5.2         27           2
 G glycine             6.0         31           2
 H histidine           2.3         12           1
 I isoleucine          5.2         27           2
 K lysine              5.8         30           1
 L leucine            10.0         52           2
 M methionine          2.7         14           1
 N asparagine          5.6         29           2
 P proline             5.4         28           2
 Q glutamine           2.7         14           2
 R arginine            5.2         27           2
 S serine              6.7         35           2
 T threonine           5.4         28           2
 V valine              5.6         29           2
 W tryptophan          0.8          4           1
 Y tyrosine            3.5         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 3, catalytic subunit, alpha isofo... 
PPP3CA                0.975   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.866   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CB                0.837   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.836   protein phosphatase 3, catalytic subunit, beta isofo...
PPP3CB                0.815   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CC                0.805   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPP2CB                0.195   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.195   protein phosphatase 2, catalytic subunit, beta isofor...
PPP1CA                0.194   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CC                0.194   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP1CA                0.194   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP4C                 0.192   protein phosphatase 4, catalytic subunit 
PPP2CA                0.192   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP1CB                0.189   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.189   protein phosphatase 1, catalytic subunit, beta isofor...
PPP6C                 0.183   protein phosphatase 6, catalytic subunit isoform b [H...
PPP6C                 0.182   protein phosphatase 6, catalytic subunit isoform a ...
PPP5C                 0.180   protein phosphatase 5, catalytic subunit 
PPP1CA                0.177   protein phosphatase 1, catalytic subunit, alpha isof...
PPP6C                 0.149   protein phosphatase 6, catalytic subunit isoform c ...
PPEF1                 0.097   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.087   protein phosphatase with EF hand calcium-binding dom...
LOC100128362          0.079   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.079   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.079   PREDICTED: similar to protein phosphatase 2, cataly...
PPEF2                 0.073   serine/threonine protein phosphatase with EF-hand mo...
PPEF1                 0.071   protein phosphatase with EF hand calcium-binding dom...
GLS                   0.008   glutaminase 
SPATA18               0.005   spermatogenesis associated 18 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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