Guide to the Human Genome
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Name: PPP1CC Sequence: fasta or formatted (323aa) NCBI GI: 4506007
Description:

protein phosphatase 1, catalytic subunit, gamma isoform

Referenced in:

Myosin
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         16           2
 C cysteine            4.0         13           2
 D aspartate           7.1         23           1
 E glutamate           6.5         21           1
 F phenylalanine       5.6         18           2
 G glycine             6.8         22           2
 H histidine           1.9          6           1
 I isoleucine          6.5         21           2
 K lysine              7.1         23           3
 L leucine            12.1         39           3
 M methionine          2.2          7           2
 N asparagine          4.0         13           1
 P proline             5.3         17           2
 Q glutamine           4.0         13           1
 R arginine            5.6         18           2
 S serine              4.3         14           1
 T threonine           3.1         10           1
 V valine              4.3         14           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.7         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, catalytic subunit, gamma isofo... 
PPP1CA                0.918   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP1CA                0.904   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CB                0.876   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.876   protein phosphatase 1, catalytic subunit, beta isofor...
PPP1CA                0.760   protein phosphatase 1, catalytic subunit, alpha isof...
PPP2CB                0.430   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.430   protein phosphatase 2, catalytic subunit, beta isofor...
PPP2CA                0.420   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP4C                 0.417   protein phosphatase 4, catalytic subunit 
PPP6C                 0.372   protein phosphatase 6, catalytic subunit isoform b [H...
PPP6C                 0.362   protein phosphatase 6, catalytic subunit isoform a ...
PPP6C                 0.312   protein phosphatase 6, catalytic subunit isoform c ...
PPP3CA                0.311   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.311   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CA                0.309   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CC                0.303   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPP3CB                0.303   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.303   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.303   protein phosphatase 3, catalytic subunit, beta isofo...
PPP5C                 0.284   protein phosphatase 5, catalytic subunit 
PPEF1                 0.184   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.168   protein phosphatase with EF hand calcium-binding dom...
LOC100128362          0.148   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.148   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.148   PREDICTED: similar to protein phosphatase 2, cataly...
PPEF2                 0.144   serine/threonine protein phosphatase with EF-hand mo...
PPEF1                 0.119   protein phosphatase with EF hand calcium-binding dom...
ZNF317                0.008   zinc finger protein 317 
FLJ10213              0.005   hypothetical protein LOC55096 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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