Guide to the Human Genome
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Name: PPP4C Sequence: fasta or formatted (307aa) NCBI GI: 4506027
Description:

protein phosphatase 4, catalytic subunit

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         17           2
 C cysteine            3.3         10           1
 D aspartate           7.8         24           1
 E glutamate           7.2         22           2
 F phenylalanine       4.9         15           1
 G glycine             6.8         21           2
 H histidine           2.3          7           1
 I isoleucine          6.8         21           2
 K lysine              3.9         12           2
 L leucine             9.1         28           4
 M methionine          1.6          5           1
 N asparagine          2.6          8           1
 P proline             3.9         12           1
 Q glutamine           4.2         13           1
 R arginine            6.2         19           2
 S serine              5.2         16           1
 T threonine           4.6         14           2
 V valine              7.8         24           2
 W tryptophan          1.6          5           1
 Y tyrosine            4.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 4, catalytic subunit 
PPP2CB                0.678   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.678   protein phosphatase 2, catalytic subunit, beta isofor...
PPP2CA                0.676   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP6C                 0.628   protein phosphatase 6, catalytic subunit isoform b [H...
PPP6C                 0.597   protein phosphatase 6, catalytic subunit isoform a ...
PPP6C                 0.547   protein phosphatase 6, catalytic subunit isoform c ...
PPP1CC                0.442   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP1CA                0.439   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CA                0.439   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP1CB                0.430   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.430   protein phosphatase 1, catalytic subunit, beta isofor...
PPP1CA                0.394   protein phosphatase 1, catalytic subunit, alpha isof...
PPP3CA                0.326   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.326   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CB                0.326   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.326   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.326   protein phosphatase 3, catalytic subunit, beta isofo...
PPP5C                 0.321   protein phosphatase 5, catalytic subunit 
PPP3CA                0.318   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CC                0.311   protein phosphatase 3, catalytic subunit, gamma [Hom...
LOC100128362          0.300   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.295   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.295   PREDICTED: similar to protein phosphatase 2, cataly...
PPEF1                 0.177   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.159   protein phosphatase with EF hand calcium-binding dom...
PPEF2                 0.134   serine/threonine protein phosphatase with EF-hand mo...
PPEF1                 0.121   protein phosphatase with EF hand calcium-binding dom...
DLL3                  0.008   delta-like 3 protein isoform 1 precursor 
C12orf30              0.007   mitochondrial distribution and morphology 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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