Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPP3CA Sequence: fasta or formatted (511aa) NCBI GI: 194688147
Description:

protein phosphatase 3, catalytic subunit, alpha isoform isoform 2

Referenced in:

Calmodulin and Calcium
Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [469aa] protein phosphatase 3, catalytic subunit, alpha isoform isoform 3
alt prot [521aa] protein phosphatase 3, catalytic subunit, alpha isoform isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         32           3
 C cysteine            2.3         12           1
 D aspartate           6.1         31           2
 E glutamate           6.7         34           2
 F phenylalanine       5.3         27           2
 G glycine             6.1         31           2
 H histidine           2.3         12           1
 I isoleucine          5.1         26           2
 K lysine              5.9         30           1
 L leucine            10.2         52           2
 M methionine          2.7         14           1
 N asparagine          5.7         29           2
 P proline             5.5         28           2
 Q glutamine           2.7         14           2
 R arginine            5.3         27           2
 S serine              6.8         35           2
 T threonine           5.3         27           2
 V valine              5.5         28           2
 W tryptophan          0.8          4           1
 Y tyrosine            3.5         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 3, catalytic subunit, alpha iso... 
PPP3CA                0.992   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CA                0.889   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CB                0.837   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.829   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.828   protein phosphatase 3, catalytic subunit, beta isofo...
PPP3CC                0.797   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPP2CB                0.198   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.198   protein phosphatase 2, catalytic subunit, beta isofor...
PPP1CA                0.197   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CC                0.197   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP1CA                0.197   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP4C                 0.195   protein phosphatase 4, catalytic subunit 
PPP2CA                0.195   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP1CB                0.192   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.192   protein phosphatase 1, catalytic subunit, beta isofor...
PPP6C                 0.186   protein phosphatase 6, catalytic subunit isoform b [H...
PPP6C                 0.185   protein phosphatase 6, catalytic subunit isoform a ...
PPP5C                 0.184   protein phosphatase 5, catalytic subunit 
PPP1CA                0.181   protein phosphatase 1, catalytic subunit, alpha isof...
PPP6C                 0.151   protein phosphatase 6, catalytic subunit isoform c ...
PPEF1                 0.099   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.088   protein phosphatase with EF hand calcium-binding dom...
LOC100128362          0.080   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.080   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.080   PREDICTED: similar to protein phosphatase 2, cataly...
PPEF2                 0.075   serine/threonine protein phosphatase with EF-hand mo...
PPEF1                 0.073   protein phosphatase with EF hand calcium-binding dom...
GLS                   0.008   glutaminase 
ZNF649                0.005   zinc finger protein 649 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press