Guide to the Human Genome
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Name: PPP3CB Sequence: fasta or formatted (515aa) NCBI GI: 215272354
Description:

protein phosphatase 3, catalytic subunit, beta isoform c

Referenced in:

Calmodulin and Calcium
Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [524aa] protein phosphatase 3, catalytic subunit, beta isoform b
alt prot [525aa] protein phosphatase 3, catalytic subunit, beta isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         36           3
 C cysteine            2.3         12           1
 D aspartate           5.0         26           2
 E glutamate           7.6         39           2
 F phenylalanine       5.6         29           2
 G glycine             6.2         32           2
 H histidine           2.9         15           1
 I isoleucine          5.0         26           2
 K lysine              4.1         21           1
 L leucine             9.3         48           2
 M methionine          2.5         13           1
 N asparagine          5.0         26           3
 P proline             7.6         39          11
 Q glutamine           2.9         15           2
 R arginine            6.2         32           2
 S serine              5.6         29           1
 T threonine           4.7         24           2
 V valine              6.2         32           2
 W tryptophan          0.8          4           1
 Y tyrosine            3.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 3, catalytic subunit, beta isof... 
PPP3CB                0.992   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.986   protein phosphatase 3, catalytic subunit, beta isofo...
PPP3CA                0.823   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.815   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CC                0.775   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPP3CA                0.714   protein phosphatase 3, catalytic subunit, alpha iso...
PPP4C                 0.192   protein phosphatase 4, catalytic subunit 
PPP2CB                0.191   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.191   protein phosphatase 2, catalytic subunit, beta isofor...
PPP1CA                0.189   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CA                0.189   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP1CC                0.189   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP2CA                0.187   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP1CB                0.184   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.184   protein phosphatase 1, catalytic subunit, beta isofor...
PPP5C                 0.182   protein phosphatase 5, catalytic subunit 
PPP6C                 0.179   protein phosphatase 6, catalytic subunit isoform a ...
PPP6C                 0.179   protein phosphatase 6, catalytic subunit isoform b [H...
PPP1CA                0.175   protein phosphatase 1, catalytic subunit, alpha isof...
PPP6C                 0.144   protein phosphatase 6, catalytic subunit isoform c ...
PPEF1                 0.095   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.086   protein phosphatase with EF hand calcium-binding dom...
LOC100128362          0.074   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.074   PREDICTED: similar to protein phosphatase 2, cataly...
LOC100128362          0.074   PREDICTED: similar to protein phosphatase 2, cataly...
PPEF1                 0.070   protein phosphatase with EF hand calcium-binding dom...
PPEF2                 0.068   serine/threonine protein phosphatase with EF-hand mo...
RANBP9                0.019   RAN binding protein 9 
FMNL1                 0.019   formin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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