Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4758754
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758754 napsin A preproprotein [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758754 napsin A preproprotein [Homo sapiens] 866 0.0
gi|4503143 cathepsin D preproprotein [Homo sapiens] 386 e-107
gi|4503145 cathepsin E isoform a preproprotein [Homo sapiens] 334 1e-91
gi|4506475 renin preproprotein [Homo sapiens] 298 6e-81
gi|23943854 pepsinogen 5, group I [Homo sapiens] 287 1e-77
gi|119372302 pepsinogen 4, group I [Homo sapiens] 286 2e-77
gi|119372298 pepsinogen 3, group I [Homo sapiens] 286 2e-77
gi|4505757 progastricsin (pepsinogen C) [Homo sapiens] 250 1e-66
gi|23110952 cathepsin E isoform b preproprotein [Homo sapiens] 210 2e-54
gi|21040360 beta-site APP-cleaving enzyme 2 isoform C preproprot... 78 2e-14
gi|19923395 beta-site APP-cleaving enzyme 2 isoform A preproprot... 77 3e-14
gi|21040362 beta-site APP-cleaving enzyme 2 isoform B preproprot... 77 3e-14
gi|169218035 PREDICTED: similar to pepsinogen 3, group I [Homo s... 67 3e-11
gi|6912266 beta-site APP-cleaving enzyme 1 isoform A preproprote... 66 7e-11
gi|21040366 beta-site APP-cleaving enzyme 1 isoform B preproprot... 61 2e-09
gi|21040364 beta-site APP-cleaving enzyme 1 isoform C preproprot... 50 4e-06
gi|21040368 beta-site APP-cleaving enzyme 1 isoform D preproprot... 48 2e-05
gi|26986534 Rho GTPase activating protein 12 [Homo sapiens] 31 2.4
gi|11321593 insulin-like growth factor binding protein 6 [Homo s... 29 7.0
gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo ... 29 7.0
gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo ... 29 7.0
gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo ... 29 7.0
gi|22507376 G-protein coupled receptor TG1019 [Homo sapiens] 29 9.1
>gi|4758754 napsin A preproprotein [Homo sapiens]
Length = 420
Score = 866 bits (2237), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 MSPPPLLQPLLLLLPLLNVEPSGATLIRIPLHRVQPGRRILNLLRGWREPAELPKLGAPS 60
MSPPPLLQPLLLLLPLLNVEPSGATLIRIPLHRVQPGRRILNLLRGWREPAELPKLGAPS
Sbjct: 1 MSPPPLLQPLLLLLPLLNVEPSGATLIRIPLHRVQPGRRILNLLRGWREPAELPKLGAPS 60
Query: 61 PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHH 120
PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHH
Sbjct: 61 PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHH 120
Query: 121 RFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF 180
RFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF
Sbjct: 121 RFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF 180
Query: 181 AHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDP 240
AHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDP
Sbjct: 181 AHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDP 240
Query: 241 AHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALH 300
AHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALH
Sbjct: 241 AHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALH 300
Query: 301 AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA 360
AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA
Sbjct: 301 AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA 360
Query: 361 LDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLARARTRGADLGWGETAQAQFPG 420
LDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLARARTRGADLGWGETAQAQFPG
Sbjct: 361 LDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLARARTRGADLGWGETAQAQFPG 420
>gi|4503143 cathepsin D preproprotein [Homo sapiens]
Length = 412
Score = 386 bits (991), Expect = e-107
Identities = 192/413 (46%), Positives = 265/413 (64%), Gaps = 22/413 (5%)
Query: 7 LQPLLLL-LPLLNVEPSGATLIRIPLHRVQPGRRILNLLRGWRE------PAELPKLGAP 59
+QP LL L L + + L+RIPLH+ RR ++ + G E P P
Sbjct: 1 MQPSSLLPLALCLLAAPASALVRIPLHKFTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVP 60
Query: 60 SPGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLH 119
+ + PI L NY D QY+GEIG+GTPPQ FTV FDTGSSNLWVPS C + CW+H
Sbjct: 61 AVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH 120
Query: 120 HRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTI-----------GGIKGASVIFG 168
H+++ SS++ NGT F I YG+G + G LS+D +++ GG+K +FG
Sbjct: 121 HKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFG 180
Query: 169 EALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEP 228
EA +P + F A FDGILG+ +P +SV V P D L++Q L+D+ +FSFYL+RDP+
Sbjct: 181 EATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQ 240
Query: 229 DGGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSL 288
GGEL+LGG+D +Y L+++ VT AYWQ+H+++V+V GLTLC +GC AI+DTGTSL
Sbjct: 241 PGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSL 300
Query: 289 ITGPTEEIRALHAAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTR 348
+ GP +E+R L AIG +PL+ GEY+I C ++ LPA++ LGG + L+ DY ++ ++
Sbjct: 301 MVGPVDEVRELQKAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQ 360
Query: 349 NGVRLCLSGFQALDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLARA 401
G LCLSGF +D+PPP+GP WILGDVF+G Y VFDR + RVG A A
Sbjct: 361 AGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDR----DNNRVGFAEA 409
>gi|4503145 cathepsin E isoform a preproprotein [Homo sapiens]
Length = 396
Score = 334 bits (856), Expect = 1e-91
Identities = 179/397 (45%), Positives = 249/397 (62%), Gaps = 12/397 (3%)
Query: 10 LLLLLPLLNVEPSGATLIRIPLHRVQPGRRILN----LLRGWREP-AELPKLGAPSPGDK 64
LLLLL LL + + +L R+PL R ++ L L W+ ++ + D+
Sbjct: 5 LLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQ 64
Query: 65 PIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDP 124
PL NY D++YFG I +G+PPQNFTV FDTGSSNLWVPS C S C H RF P
Sbjct: 65 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT--SPACKTHSRFQP 122
Query: 125 KASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFD 184
SS++ G F+IQYGTG + GI+ D++++ G+ FGE++ EP F A FD
Sbjct: 123 SQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFD 182
Query: 185 GILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAHYI 244
GILGLG+P L+V GV P D ++ Q L+D P+FS Y++ +PE G EL+ GG D +H+
Sbjct: 183 GILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFS 242
Query: 245 PPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALHAAIG 304
L +VPVT AYWQI ++ ++VG + C++GC AI+DTGTSLITGP+++I+ L AIG
Sbjct: 243 GSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 302
Query: 305 GIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQALDVP 364
P + GEY + C+ + +P V+F + GV + L+ Y + +G++ C SGFQ LD+
Sbjct: 303 AAP-VDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIH 361
Query: 365 PPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLARA 401
PPAGP WILGDVF+ + +VFDRG + RVGLA A
Sbjct: 362 PPAGPLWILGDVFIRQFYSVFDRG----NNRVGLAPA 394
>gi|4506475 renin preproprotein [Homo sapiens]
Length = 406
Score = 298 bits (763), Expect = 6e-81
Identities = 157/358 (43%), Positives = 211/358 (58%), Gaps = 13/358 (3%)
Query: 47 WREPAELPKLGAPSPGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPS 106
W +P + LG + V L+NY D QY+GEIG+GTPPQ F V FDTGSSN+WVPS
Sbjct: 60 WSQPMKRLTLGNTTSS-----VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPS 114
Query: 107 RRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVI 166
+C C H FD SSS++ NGT+ ++Y TG V G LS+D +T+GGI + +
Sbjct: 115 SKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGIT-VTQM 173
Query: 167 FGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPE 226
FGE P+L F A FDG++G+GF ++ V P D ++ QG+L + VFSFY NRD E
Sbjct: 174 FGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSE 233
Query: 227 EPD--GGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDT 284
GG++VLGGSDP HY ++ + WQI M+ V VG LC GC A++DT
Sbjct: 234 NSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDT 293
Query: 285 GTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVI 344
G S I+G T I L A+G L +Y++ C+E P LP +SF LGG + LT+ DYV
Sbjct: 294 GASYISGSTSSIEKLMEALGAKKRLF-DYVVKCNEGPTLPDISFHLGGKEYTLTSADYVF 352
Query: 345 QTTRNGVRLCLSGFQALDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLARAR 402
Q + + +LC A+D+PPP GP W LG F+ + FDR + R+G A AR
Sbjct: 353 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDR----RNNRIGFALAR 406
>gi|23943854 pepsinogen 5, group I [Homo sapiens]
Length = 388
Score = 287 bits (735), Expect = 1e-77
Identities = 165/399 (41%), Positives = 237/399 (59%), Gaps = 27/399 (6%)
Query: 11 LLLLPLLNVEPSGATLIRIPLHRVQPGRRILN---LLRGWREPAEL-------PKLGAPS 60
LLLL L+ + S + ++PL R + RR L+ LL+ + + L P+ AP+
Sbjct: 4 LLLLGLVAL--SECIMYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQWEAPT 61
Query: 61 PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHH 120
D+ PL NY D++YFG IG+GTP Q+FTV FDTGSSNLWVPS C S+ C H+
Sbjct: 62 LVDEQ---PLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCS--SLACTNHN 116
Query: 121 RFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF 180
RF+P+ SS++Q+ +I YGTG + GIL D + +GGI + IFG + EP +
Sbjct: 117 RFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY 176
Query: 181 AHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDP 240
A FDGILGL +P +S G P D + QGL+ + +FS YL+ D + G ++ GG D
Sbjct: 177 APFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSAD--DKSGSVVIFGGIDS 234
Query: 241 AHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALH 300
++Y L +VPVTV YWQI ++ + + CA+GC AI+DTGTSL+TGPT I +
Sbjct: 235 SYYTGSLNWVPVTVEGYWQITVDSITMNGETIACAEGCQAIVDTGTSLLTGPTSPIANIQ 294
Query: 301 AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA 360
+ IG G+ ++ CS I LP + F + GV + + Y++Q+ + C+SGFQ
Sbjct: 295 SDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGS----CISGFQG 350
Query: 361 LDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLA 399
++VP +G WILGDVF+ Y VFDR ++ +VGLA
Sbjct: 351 MNVPTESGELWILGDVFIRQYFTVFDR----ANNQVGLA 385
>gi|119372302 pepsinogen 4, group I [Homo sapiens]
Length = 388
Score = 286 bits (732), Expect = 2e-77
Identities = 164/399 (41%), Positives = 237/399 (59%), Gaps = 27/399 (6%)
Query: 11 LLLLPLLNVEPSGATLIRIPLHRVQPGRRILN---LLRGWREPAEL-------PKLGAPS 60
LLLL L+ + S + ++PL R + RR L+ LL+ + + L P+ AP+
Sbjct: 4 LLLLGLVAL--SECIMYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQWEAPT 61
Query: 61 PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHH 120
D+ PL NY D++YFG IG+GTP Q+FTV FDTGSSNLWVPS C S+ C H+
Sbjct: 62 LVDEQ---PLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCS--SLACTNHN 116
Query: 121 RFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF 180
RF+P+ SS++Q+ +I YGTG + GIL D + +GGI + IFG + EP +
Sbjct: 117 RFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY 176
Query: 181 AHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDP 240
A FDGILGL +P +S G P D + QGL+ + +FS YL+ D + G ++ GG D
Sbjct: 177 APFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQS--GSVVIFGGIDS 234
Query: 241 AHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALH 300
++Y L +VPVTV YWQI ++ + + CA+GC AI+DTGTSL+TGPT I +
Sbjct: 235 SYYTGSLNWVPVTVEGYWQITVDSITMNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQ 294
Query: 301 AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA 360
+ IG G+ ++ CS I LP + F + GV + + Y++Q+ + C+SGFQ
Sbjct: 295 SDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGS----CISGFQG 350
Query: 361 LDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLA 399
+++P +G WILGDVF+ Y VFDR ++ +VGLA
Sbjct: 351 MNLPTESGELWILGDVFIRQYFTVFDR----ANNQVGLA 385
>gi|119372298 pepsinogen 3, group I [Homo sapiens]
Length = 388
Score = 286 bits (732), Expect = 2e-77
Identities = 164/399 (41%), Positives = 237/399 (59%), Gaps = 27/399 (6%)
Query: 11 LLLLPLLNVEPSGATLIRIPLHRVQPGRRILN---LLRGWREPAEL-------PKLGAPS 60
LLLL L+ + S + ++PL R + RR L+ LL+ + + L P+ AP+
Sbjct: 4 LLLLGLVAL--SECIMYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQWKAPT 61
Query: 61 PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHH 120
D+ PL NY D++YFG IG+GTP Q+FTV FDTGSSNLWVPS C S+ C H+
Sbjct: 62 LVDEQ---PLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCS--SLACTNHN 116
Query: 121 RFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF 180
RF+P+ SS++Q+ +I YGTG + GIL D + +GGI + IFG + EP +
Sbjct: 117 RFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY 176
Query: 181 AHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDP 240
A FDGILGL +P +S G P D + QGL+ + +FS YL+ D + G ++ GG D
Sbjct: 177 APFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQS--GSVVIFGGIDS 234
Query: 241 AHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRALH 300
++Y L +VPVTV YWQI ++ + + CA+GC AI+DTGTSL+TGPT I +
Sbjct: 235 SYYTGSLNWVPVTVEGYWQITVDSITMNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQ 294
Query: 301 AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA 360
+ IG G+ ++ CS I LP + F + GV + + Y++Q+ + C+SGFQ
Sbjct: 295 SDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGS----CISGFQG 350
Query: 361 LDVPPPAGPFWILGDVFLGTYVAVFDRGDMKSSARVGLA 399
+++P +G WILGDVF+ Y VFDR ++ +VGLA
Sbjct: 351 MNLPTESGELWILGDVFIRQYFTVFDR----ANNQVGLA 385
>gi|4505757 progastricsin (pepsinogen C) [Homo sapiens]
Length = 388
Score = 250 bits (639), Expect = 1e-66
Identities = 143/342 (41%), Positives = 198/342 (57%), Gaps = 13/342 (3%)
Query: 62 GDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHR 121
GD + Y D YFGEI +GTPPQNF V FDTGSSNLWVPS C S C H R
Sbjct: 57 GDLSVTYEPMAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ--SQACTSHSR 114
Query: 122 FDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFA 181
F+P SS++ NG F++QYG+G + G D LT+ I+ + FG + EP F +A
Sbjct: 115 FNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYA 174
Query: 182 HFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPA 241
FDGI+GL +P LSV+ M +V++G L PVFS YL+ + + GG +V GG D +
Sbjct: 175 QFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLS-NQQGSSGGAVVFGGVDSS 233
Query: 242 HYIPPLTFVPVTVPAYWQIHMERVKVGPGLT-LCAKGCAAILDTGTSLITGPTEEIRALH 300
Y + + PVT YWQI +E +G + C++GC AI+DTGTSL+T P + + AL
Sbjct: 234 LYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALL 293
Query: 301 AAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVWFNLTAHDYVIQTTRNGVRLCLSGFQA 360
A G G++++ C+ I LP+++F++ GV F L Y++ + NG C G +
Sbjct: 294 QATGAQEDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYIL--SNNG--YCTVGVEP 349
Query: 361 LDVPPPAG-PFWILGDVFLGTYVAVFDRGDMKSSARVGLARA 401
+ G P WILGDVFL +Y +V+D G + RVG A A
Sbjct: 350 TYLSSQNGQPLWILGDVFLRSYYSVYDLG----NNRVGFATA 387
>gi|23110952 cathepsin E isoform b preproprotein [Homo sapiens]
Length = 363
Score = 210 bits (535), Expect = 2e-54
Identities = 118/271 (43%), Positives = 161/271 (59%), Gaps = 8/271 (2%)
Query: 10 LLLLLPLLNVEPSGATLIRIPLHRVQPGRRILN----LLRGWREP-AELPKLGAPSPGDK 64
LLLLL LL + + +L R+PL R ++ L L W+ ++ + D+
Sbjct: 5 LLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQ 64
Query: 65 PIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDP 124
PL NY D++YFG I +G+PPQNFTV FDTGSSNLWVPS C S C H RF P
Sbjct: 65 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT--SPACKTHSRFQP 122
Query: 125 KASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFD 184
SS++ G F+IQYGTG + GI+ D++++ G+ FGE++ EP F A FD
Sbjct: 123 SQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFD 182
Query: 185 GILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAHYI 244
GILGLG+P L+V GV P D ++ Q L+D P+FS Y++ +PE G EL+ GG D +H+
Sbjct: 183 GILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFS 242
Query: 245 PPLTFVPVTVPAYWQIHMERVKVG-PGLTLC 274
L +VPVT AYWQI ++ + P LT C
Sbjct: 243 GSLNWVPVTKQAYWQIALDNMLWSVPTLTSC 273
>gi|21040360 beta-site APP-cleaving enzyme 2 isoform C preproprotein
[Homo sapiens]
Length = 468
Score = 77.8 bits (190), Expect = 2e-14
Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 32/251 (12%)
Query: 78 YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKF 137
Y+ E+ +GTPPQ + DTGSSN V + ++ FD + SS++++ G
Sbjct: 92 YYLEMLIGTPPQKLQILVDTGSSNFAVAG------TPHSYIDTYFDTERSSTYRSKGFDV 145
Query: 138 AIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHF-------DGILGLG 190
++Y G G + ED +TI KG + F L + +F +F +GILGL
Sbjct: 146 TVKYTQGSWTGFVGEDLVTIP--KGFNTSF---LVNIATIFESENFFLPGIKWNGILGLA 200
Query: 191 FPILSV--EGVRPPMDVLVEQGLLDKPVFSFY-----LNRDPEEPDGGELVLGGSDPAHY 243
+ L+ + D LV Q + VFS L +GG LVLGG +P+ Y
Sbjct: 201 YATLAKPSSSLETFFDSLVTQANIPN-VFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLY 259
Query: 244 IPPLTFVPVTVPAYWQIHMERVKVGPGLTL---CAKGCA--AILDTGTSLITGPTEEIRA 298
+ + P+ Y+QI + ++++G G +L C + A AI+D+GT+L+ P + A
Sbjct: 260 KGDIWYTPIKEEWYYQIEILKLEIG-GQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDA 318
Query: 299 LHAAIGGIPLL 309
+ A+ LL
Sbjct: 319 VVEAVARASLL 329
>gi|19923395 beta-site APP-cleaving enzyme 2 isoform A preproprotein
[Homo sapiens]
Length = 518
Score = 77.0 bits (188), Expect = 3e-14
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 32/251 (12%)
Query: 78 YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKF 137
Y+ E+ +GTPPQ + DTGSSN V + ++ FD + SS++++ G
Sbjct: 92 YYLEMLIGTPPQKLQILVDTGSSNFAVAG------TPHSYIDTYFDTERSSTYRSKGFDV 145
Query: 138 AIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHF-------DGILGLG 190
++Y G G + ED +TI KG + F L + +F +F +GILGL
Sbjct: 146 TVKYTQGSWTGFVGEDLVTIP--KGFNTSF---LVNIATIFESENFFLPGIKWNGILGLA 200
Query: 191 FPILSV--EGVRPPMDVLVEQGLLDKPVFSFY-----LNRDPEEPDGGELVLGGSDPAHY 243
+ L+ + D LV Q + VFS L +GG LVLGG +P+ Y
Sbjct: 201 YATLAKPSSSLETFFDSLVTQANIPN-VFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLY 259
Query: 244 IPPLTFVPVTVPAYWQIHMERVKVGPGLTL---CAKGCA--AILDTGTSLITGPTEEIRA 298
+ + P+ Y+QI + ++++G G +L C + A AI+D+GT+L+ P + A
Sbjct: 260 KGDIWYTPIKEEWYYQIEILKLEIG-GQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDA 318
Query: 299 LHAAIGGIPLL 309
+ A+ L+
Sbjct: 319 VVEAVARASLI 329
>gi|21040362 beta-site APP-cleaving enzyme 2 isoform B preproprotein
[Homo sapiens]
Length = 396
Score = 77.0 bits (188), Expect = 3e-14
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 32/251 (12%)
Query: 78 YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKF 137
Y+ E+ +GTPPQ + DTGSSN V + ++ FD + SS++++ G
Sbjct: 92 YYLEMLIGTPPQKLQILVDTGSSNFAVAG------TPHSYIDTYFDTERSSTYRSKGFDV 145
Query: 138 AIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHF-------DGILGLG 190
++Y G G + ED +TI KG + F L + +F +F +GILGL
Sbjct: 146 TVKYTQGSWTGFVGEDLVTIP--KGFNTSF---LVNIATIFESENFFLPGIKWNGILGLA 200
Query: 191 FPILSV--EGVRPPMDVLVEQGLLDKPVFSFY-----LNRDPEEPDGGELVLGGSDPAHY 243
+ L+ + D LV Q + VFS L +GG LVLGG +P+ Y
Sbjct: 201 YATLAKPSSSLETFFDSLVTQANIPN-VFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLY 259
Query: 244 IPPLTFVPVTVPAYWQIHMERVKVGPGLTL---CAKGCA--AILDTGTSLITGPTEEIRA 298
+ + P+ Y+QI + ++++G G +L C + A AI+D+GT+L+ P + A
Sbjct: 260 KGDIWYTPIKEEWYYQIEILKLEIG-GQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDA 318
Query: 299 LHAAIGGIPLL 309
+ A+ L+
Sbjct: 319 VVEAVARASLI 329
>gi|169218035 PREDICTED: similar to pepsinogen 3, group I [Homo
sapiens]
Length = 87
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 274 CAKGCAAILDTGTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGV 333
CA+GC AI+DTGTSL+TGPT I + + IG G+ ++ CS I LP + F + GV
Sbjct: 8 CAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGV 67
Query: 334 WFNLTAHDYVIQTTR 348
+ + Y++Q R
Sbjct: 68 QYPVPPSAYILQVRR 82
>gi|6912266 beta-site APP-cleaving enzyme 1 isoform A preproprotein
[Homo sapiens]
Length = 501
Score = 65.9 bits (159), Expect = 7e-11
Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 35/312 (11%)
Query: 9 PLLLLLPLLNVEPSGATL--IRIPLHRVQPGRRILNLLRGWREPAELPKLGAPSPGDKPI 66
P LLL V P+ T IR+PL G + LR RE E P+ PG +
Sbjct: 6 PWLLLWMGAGVLPAHGTQHGIRLPLRSGLGGAPLG--LRLPRETDEEPE----EPGRRGS 59
Query: 67 FVPL-SNYRDVQ---YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRF 122
FV + N R Y+ E+ +G+PPQ + DTGSSN V + F LH +
Sbjct: 60 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF------LHRYY 113
Query: 123 DPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAF-- 180
+ SS+++ + Y G+ +G L D ++I +V A S F
Sbjct: 114 QRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFING 173
Query: 181 AHFDGILGLGFPILS--VEGVRPPMDVLVEQGLLDKPVFS-------FYLNRDPEEPD-G 230
++++GILGL + ++ + + P D LV+Q + +FS F LN+ G
Sbjct: 174 SNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPN-LFSLQLCGAGFPLNQSEVLASVG 232
Query: 231 GELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKV-GPGLTLCAKGC---AAILDTGT 286
G +++GG D + Y L + P+ Y+++ + RV++ G L + K +I+D+GT
Sbjct: 233 GSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGT 292
Query: 287 SLITGPTEEIRA 298
+ + P + A
Sbjct: 293 TNLRLPKKVFEA 304
>gi|21040366 beta-site APP-cleaving enzyme 1 isoform B preproprotein
[Homo sapiens]
Length = 476
Score = 60.8 bits (146), Expect = 2e-09
Identities = 81/313 (25%), Positives = 127/313 (40%), Gaps = 62/313 (19%)
Query: 9 PLLLLLPLLNVEPSGATL--IRIPLHRVQPGRRILNLLRGWREPAELPKLGAPSPGDKPI 66
P LLL V P+ T IR+PL G + LR RE E P+ PG +
Sbjct: 6 PWLLLWMGAGVLPAHGTQHGIRLPLRSGLGGAPLG--LRLPRETDEEPE----EPGRRGS 59
Query: 67 FVPL-SNYRDVQ---YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRF 122
FV + N R Y+ E+ +G+PPQ + DTGSSN V + F LH +
Sbjct: 60 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF------LHRYY 113
Query: 123 DPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASV-------------IFGE 169
+ SS+++ + Y G+ +G L D ++I +V
Sbjct: 114 QRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFING 173
Query: 170 ALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPD 229
+ WE L A+A + G GFP+ E VL
Sbjct: 174 SNWEGILGLAYAEIARLCGAGFPLNQSE-------VLASV-------------------- 206
Query: 230 GGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKV-GPGLTLCAKGC---AAILDTG 285
GG +++GG D + Y L + P+ Y+++ + RV++ G L + K +I+D+G
Sbjct: 207 GGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSG 266
Query: 286 TSLITGPTEEIRA 298
T+ + P + A
Sbjct: 267 TTNLRLPKKVFEA 279
>gi|21040364 beta-site APP-cleaving enzyme 1 isoform C preproprotein
[Homo sapiens]
Length = 457
Score = 50.1 bits (118), Expect = 4e-06
Identities = 83/308 (26%), Positives = 126/308 (40%), Gaps = 71/308 (23%)
Query: 9 PLLLLLPLLNVEPSGATL--IRIPLHRVQPGRRILNLLRGWREPAELPKLGAPSPGDKPI 66
P LLL V P+ T IR+PL G + LR RE E P+ PG +
Sbjct: 6 PWLLLWMGAGVLPAHGTQHGIRLPLRSGLGGAPLG--LRLPRETDEEPE----EPGRRGS 59
Query: 67 FVPL-SNYRDVQ---YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRF 122
FV + N R Y+ E+ +G+PPQ + DTGSSN V + F LH +
Sbjct: 60 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF------LHRYY 113
Query: 123 DPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAH 182
+ SS+++ KG V + + WE
Sbjct: 114 QRQLSSTYRDLR--------------------------KGVYVPYTQGKWE--------- 138
Query: 183 FDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFS-------FYLNRDPEEPD-GGELV 234
G LG P S+E P D LV+Q + +FS F LN+ GG ++
Sbjct: 139 --GELGTDLPDDSLE---PFFDSLVKQTHVPN-LFSLQLCGAGFPLNQSEVLASVGGSMI 192
Query: 235 LGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKV-GPGLTLCAKGC---AAILDTGTSLIT 290
+GG D + Y L + P+ Y+++ + RV++ G L + K +I+D+GT+ +
Sbjct: 193 IGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLR 252
Query: 291 GPTEEIRA 298
P + A
Sbjct: 253 LPKKVFEA 260
>gi|21040368 beta-site APP-cleaving enzyme 1 isoform D preproprotein
[Homo sapiens]
Length = 432
Score = 47.8 bits (112), Expect = 2e-05
Identities = 75/300 (25%), Positives = 115/300 (38%), Gaps = 80/300 (26%)
Query: 9 PLLLLLPLLNVEPSGATL--IRIPLHRVQPGRRILNLLRGWREPAELPKLGAPSPGDKPI 66
P LLL V P+ T IR+PL G + LR RE E P+ PG +
Sbjct: 6 PWLLLWMGAGVLPAHGTQHGIRLPLRSGLGGAPLG--LRLPRETDEEPE----EPGRRGS 59
Query: 67 FVPL-SNYRDVQ---YFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRF 122
FV + N R Y+ E+ +G+PPQ + DTGSSN V + F LH +
Sbjct: 60 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF------LHRYY 113
Query: 123 DPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAH 182
+ SS+++ + Y G+ +G L D L
Sbjct: 114 QRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLL--------------------------- 146
Query: 183 FDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAH 242
G GFP+ E VL GG +++GG D +
Sbjct: 147 ----CGAGFPLNQSE-------VLASV--------------------GGSMIIGGIDHSL 175
Query: 243 YIPPLTFVPVTVPAYWQIHMERVKV-GPGLTLCAKGC---AAILDTGTSLITGPTEEIRA 298
Y L + P+ Y+++ + RV++ G L + K +I+D+GT+ + P + A
Sbjct: 176 YTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEA 235
>gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]
Length = 846
Score = 30.8 bits (68), Expect = 2.4
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 47 WREPAELPKLGAPSPGDKPIFVPLSNYRDVQYF-GEIGLGTPPQNFTVAFDTGSSNLWVP 105
W A + K +PGD+ + NY Y + G+PP+ ++ D L+
Sbjct: 298 WTRDASISKGDFQNPGDQELLSSEENYYSTSYSQSDSQCGSPPRGWSEELDERGHTLYTS 357
Query: 106 SRRCHFFSVPCWLHHRFDPKASSSFQANGTK 136
++ WL H D + A+G++
Sbjct: 358 D-----YTNEKWLKHVDDQGRQYYYSADGSR 383
>gi|11321593 insulin-like growth factor binding protein 6 [Homo
sapiens]
Length = 240
Score = 29.3 bits (64), Expect = 7.0
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 1 MSPPPLLQPLLLLLPLLNVEPSGATLIRIP 30
M+P LL PLLLLL LL G L R P
Sbjct: 1 MTPHRLLPPLLLLLALLLAASPGGALARCP 30
>gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo
sapiens]
Length = 244
Score = 29.3 bits (64), Expect = 7.0
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Query: 1 MSPPPLLQPLLLLLPLLNVEPSGATLIRI-PLHRVQPGRRILNLLRGWREPAELPKLGAP 59
+ PPPLL PL LL ++ +GA + + R P R ++L R+ L L A
Sbjct: 101 LPPPPLLPPLPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSA- 159
Query: 60 SPGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLH 119
SP ++ + + G PP F+ A + S W S C F W H
Sbjct: 160 SPSERLGLLSSCS--------PSAAGAPPDGFSPASLSLSFWAWA-SLECRHFIRRFWNH 210
>gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo
sapiens]
Length = 244
Score = 29.3 bits (64), Expect = 7.0
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Query: 1 MSPPPLLQPLLLLLPLLNVEPSGATLIRI-PLHRVQPGRRILNLLRGWREPAELPKLGAP 59
+ PPPLL PL LL ++ +GA + + R P R ++L R+ L L A
Sbjct: 101 LPPPPLLPPLPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSA- 159
Query: 60 SPGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLH 119
SP ++ + + G PP F+ A + S W S C F W H
Sbjct: 160 SPSERLGLLSSCS--------PSAAGAPPDGFSPASLSLSFWAWA-SLECRHFIRRFWNH 210
>gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo
sapiens]
Length = 244
Score = 29.3 bits (64), Expect = 7.0
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Query: 1 MSPPPLLQPLLLLLPLLNVEPSGATLIRI-PLHRVQPGRRILNLLRGWREPAELPKLGAP 59
+ PPPLL PL LL ++ +GA + + R P R ++L R+ L L A
Sbjct: 101 LPPPPLLPPLPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSA- 159
Query: 60 SPGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLH 119
SP ++ + + G PP F+ A + S W S C F W H
Sbjct: 160 SPSERLGLLSSCS--------PSAAGAPPDGFSPASLSLSFWAWA-SLECRHFIRRFWNH 210
>gi|22507376 G-protein coupled receptor TG1019 [Homo sapiens]
Length = 423
Score = 28.9 bits (63), Expect = 9.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 37 GRRILNLLRG-W-REPAELPKLGAPSPGDKPIFVPLS 71
GRR+ NLL G W ++P EL L +PSP +P S
Sbjct: 24 GRRLQNLLSGPWPKQPMELHNLSSPSPSLSSSVLPPS 60
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.144 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,099,087
Number of Sequences: 37866
Number of extensions: 987318
Number of successful extensions: 1773
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1718
Number of HSP's gapped (non-prelim): 25
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.