Guide to the Human Genome
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Name: KCNQ5 Sequence: fasta or formatted (822aa) NCBI GI: 236462242
Description:

potassium voltage-gated channel, KQT-like subfamily, member 5 isoform 5

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [923aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
alt prot [942aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
alt prot [951aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
alt prot [932aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         73           6
 C cysteine            1.9         16           3
 D aspartate           3.8         31           2
 E glutamate           5.0         41           2
 F phenylalanine       4.0         33           2
 G glycine             7.9         65           6
 H histidine           1.9         16           2
 I isoleucine          5.4         44           2
 K lysine              5.8         48           2
 L leucine            10.7         88           4
 M methionine          1.6         13           1
 N asparagine          2.3         19           1
 P proline             4.3         35           3
 Q glutamine           4.6         38           2
 R arginine            6.4         53           2
 S serine             10.2         84           2
 T threonine           6.0         49           2
 V valine              5.6         46           2
 W tryptophan          1.5         12           2
 Y tyrosine            2.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, KQT-like subfamily... 
KCNQ5                 0.507   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ5                 0.507   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.497   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.496   potassium voltage-gated channel, KQT-like subfamily...
KCNQ4                 0.303   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ4                 0.303   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ2                 0.280   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.280   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.280   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.280   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.279   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ3                 0.260   potassium voltage-gated channel KQT-like protein 3 [H...
KCNQ1                 0.204   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ1                 0.186   potassium voltage-gated channel, KQT-like subfamily,...
KCNA3                 0.041   potassium voltage-gated channel, shaker-related subf...
KCNB2                 0.039   potassium voltage-gated channel, Shab-related subfam...
KCNC4                 0.039   Shaw-related voltage-gated potassium channel protein...
KCNB1                 0.039   potassium voltage-gated channel, Shab-related subfami...
KCNA4                 0.039   potassium voltage-gated channel, shaker-related subfa...
KCNC4                 0.039   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.039   Shaw-related voltage-gated potassium channel protein...
KCNA1                 0.038   potassium voltage-gated channel subfamily A member ...
KCNC2                 0.037   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.037   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.037   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.036   Shaw-related voltage-gated potassium channel protein...
KCNA2                 0.035   potassium voltage-gated channel, shaker-related subfa...
KCND2                 0.034   potassium voltage-gated channel, Shal-related subfami...
KCNV1                 0.034   potassium channel, subfamily V, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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