Guide to the Human Genome
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Name: FDX1 Sequence: fasta or formatted (184aa) NCBI GI: 4758352
Description:

ferredoxin 1 precursor

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         20           3
 C cysteine            2.7          5           1
 D aspartate           8.2         15           1
 E glutamate           5.4         10           2
 F phenylalanine       1.6          3           1
 G glycine            10.9         20           2
 H histidine           2.7          5           2
 I isoleucine          4.3          8           1
 K lysine              3.3          6           1
 L leucine            10.3         19           2
 M methionine          2.2          4           1
 N asparagine          3.3          6           2
 P proline             1.6          3           1
 Q glutamine           1.1          2           1
 R arginine            7.6         14           1
 S serine              9.8         18           3
 T threonine           6.5         12           2
 V valine              6.0         11           3
 W tryptophan          0.5          1           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ferredoxin 1 precursor 
FDX1L                 0.196   ferredoxin 1-like 
ARL16                 0.021   ADP-ribosylation factor-like 16 
LRFN1                 0.021   leucine rich repeat and fibronectin type III domain...
DOCK1                 0.018   dedicator of cytokinesis 1 
HNRNPD                0.015   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.015   heterogeneous nuclear ribonucleoprotein D isoform d ...
RTN1                  0.015   reticulon 1 isoform A 
PDIA2                 0.015   protein disulfide isomerase A2 
MAP3K1                0.015   mitogen-activated protein kinase kinase kinase 1 [H...
PCDHGB5               0.012   protocadherin gamma subfamily B, 5 isoform 2 precurs...
PCDHGB5               0.012   protocadherin gamma subfamily B, 5 isoform 1 precurs...
LOC100130458          0.009   PREDICTED: hypothetical protein 
LOC100130458          0.009   PREDICTED: hypothetical protein 
LOC100130458          0.009   PREDICTED: hypothetical protein 
PCDHGB4               0.009   protocadherin gamma subfamily B, 4 isoform 2 precurs...
PCDHGB4               0.009   protocadherin gamma subfamily B, 4 isoform 1 precurs...
MLL                   0.009   myeloid/lymphoid or mixed-lineage leukemia protein [...
LOC100293375          0.009   PREDICTED: hypothetical protein 
LOC728650             0.009   PREDICTED: hypothetical protein 
LOC100291691          0.009   PREDICTED: hypothetical protein XP_002345524 
LOC100294462          0.009   PREDICTED: hypothetical protein 
LOC100288476          0.009   PREDICTED: hypothetical protein XP_002343815 
LOC100133305          0.009   PREDICTED: hypothetical protein 
LOC100133305          0.009   PREDICTED: hypothetical protein 
LIG3                  0.009   ligase III, DNA, ATP-dependent isoform beta precurso...
LIG3                  0.009   ligase III, DNA, ATP-dependent isoform alpha precurs...
NCAPH                 0.009   non-SMC condensin I complex, subunit H 
BRWD3                 0.009   bromodomain and WD repeat domain containing 3 [Homo...
ADRA2C                0.006   alpha-2C-adrenergic receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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