Guide to the Human Genome
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Name: ARL16 Sequence: fasta or formatted (197aa) NCBI GI: 91199552
Description:

ADP-ribosylation factor-like 16

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         19           1
 C cysteine            3.0          6           1
 D aspartate           4.1          8           1
 E glutamate           5.1         10           2
 F phenylalanine       1.0          2           1
 G glycine            10.7         21           2
 H histidine           1.0          2           1
 I isoleucine          5.6         11           2
 K lysine              4.1          8           1
 L leucine            13.7         27           3
 M methionine          3.0          6           1
 N asparagine          2.5          5           1
 P proline             4.6          9           3
 Q glutamine           3.6          7           1
 R arginine            6.6         13           1
 S serine              7.1         14           2
 T threonine           6.6         13           2
 V valine              5.6         11           1
 W tryptophan          1.0          2           1
 Y tyrosine            1.5          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 16 
ARL1                  0.158   ADP-ribosylation factor-like 1 
ARF6                  0.126   ADP-ribosylation factor 6 
ARF4                  0.126   ADP-ribosylation factor 4 
ARF1                  0.126   ADP-ribosylation factor 1 
ARF1                  0.126   ADP-ribosylation factor 1 
ARF1                  0.126   ADP-ribosylation factor 1 
ARF1                  0.126   ADP-ribosylation factor 1 
ARF5                  0.126   ADP-ribosylation factor 5 
ARF3                  0.126   ADP-ribosylation factor 3 
TRIM23                0.123   ADP-ribosylation factor domain protein 1 isoform alph...
ARL14                 0.109   ADP-ribosylation factor-like 14 
TRIM23                0.104   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.104   ADP-ribosylation factor domain protein 1 isoform bet...
SAR1A                 0.098   SAR1a gene homolog 1 
SAR1A                 0.098   SAR1a gene homolog 1 
ARL5A                 0.093   ADP-ribosylation factor-like 5A isoform 1 
SAR1B                 0.093   SAR1a gene homolog 2 
SAR1B                 0.093   SAR1a gene homolog 2 
ARFRP1                0.090   ADP-ribosylation factor related protein 1 isoform a [...
ARL5B                 0.090   ADP-ribosylation factor-like 8 
ARL5A                 0.087   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.087   ADP-ribosylation factor-like 5A isoform 2 
ARL2                  0.087   ADP-ribosylation factor-like 2 
ARFRP1                0.085   ADP-ribosylation factor related protein 1 isoform b...
ARL3                  0.082   ADP-ribosylation factor-like 3 
ARL8B                 0.079   ADP-ribosylation factor-like 10C 
ARL8A                 0.079   ADP-ribosylation factor-like 8A 
ARL15                 0.077   ADP-ribosylation factor-like 15 
ARL5C                 0.074   ADP-ribosylation factor-like 5C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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