Guide to the Human Genome
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Name: FDX1L Sequence: fasta or formatted (183aa) NCBI GI: 72534754
Description:

ferredoxin 1-like

Referenced in:

Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         16           2
 C cysteine            2.2          4           1
 D aspartate           6.0         11           2
 E glutamate           7.7         14           2
 F phenylalanine       2.2          4           1
 G glycine            12.0         22           2
 H histidine           3.3          6           1
 I isoleucine          1.6          3           1
 K lysine              1.6          3           1
 L leucine             9.3         17           2
 M methionine          2.2          4           1
 N asparagine          2.7          5           1
 P proline             7.1         13           3
 Q glutamine           3.3          6           1
 R arginine            7.7         14           1
 S serine              6.0         11           1
 T threonine           4.9          9           2
 V valine              9.3         17           2
 W tryptophan          1.1          2           2
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ferredoxin 1-like 
FDX1                  0.190   ferredoxin 1 precursor 
LOC642891             0.014   PREDICTED: hypothetical protein 
LOC642891             0.014   PREDICTED: hypothetical protein 
HMCN2                 0.011   PREDICTED: hemicentin 2 
HMCN2                 0.011   PREDICTED: hemicentin 2 
HMCN2                 0.009   PREDICTED: hemicentin 2 
SLC22A18AS            0.009   solute carrier family 22 (organic cation transporte...
LOC100133654          0.009   PREDICTED: hypothetical protein 
ME2                   0.009   malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo...
LOC402198             0.009   PREDICTED: similar to hCG1641913 
PCDHAC1               0.009   protocadherin alpha subfamily C, 1 isoform 1 precurs...
PCDHAC1               0.009   protocadherin alpha subfamily C, 1 isoform 2 precurs...
ANKRD24               0.009   ankyrin repeat domain 24 
IRS4                  0.006   insulin receptor substrate 4 
PPP1R14C              0.006   protein phosphatase 1, regulatory (inhibitor) subuni...
CLTCL1                0.006   clathrin, heavy polypeptide-like 1 isoform 2 
CLTCL1                0.006   clathrin, heavy polypeptide-like 1 isoform 1 
LOC100133678          0.006   PREDICTED: similar to major histocompatibility comp...
LOC100294277          0.006   PREDICTED: similar to major histocompatibility comp...
LOC100294114          0.006   PREDICTED: similar to major histocompatibility comp...
RASIP1                0.006   Ras-interacting protein 1 
GPRASP2               0.006   G protein-coupled receptor associated sorting protei...
GPRASP2               0.006   G protein-coupled receptor associated sorting protei...
LOC100293107          0.006   PREDICTED: hypothetical protein 
LOC100290679          0.006   PREDICTED: hypothetical protein XP_002347834 
LOC100288571          0.006   PREDICTED: hypothetical protein XP_002343612 
PEAR1                 0.006   platelet endothelial aggregation receptor 1 
NCOA6                 0.006   nuclear receptor coactivator 6 
FGD5                  0.006   FYVE, RhoGEF and PH domain containing 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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