Guide to the Human Genome
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Name: ADRA2C Sequence: fasta or formatted (462aa) NCBI GI: 71773208
Description:

alpha-2C-adrenergic receptor

Referenced in:

Catecholamines

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.3         66           4
 C cysteine            2.6         12           1
 D aspartate           2.2         10           1
 E glutamate           3.2         15           1
 F phenylalanine       5.8         27           3
 G glycine            10.2         47           2
 H histidine           0.6          3           1
 I isoleucine          3.5         16           1
 K lysine              1.7          8           1
 L leucine             8.7         40           1
 M methionine          1.1          5           1
 N asparagine          2.6         12           1
 P proline             5.6         26           3
 Q glutamine           2.4         11           1
 R arginine           10.0         46           5
 S serine              8.4         39           2
 T threonine           3.2         15           2
 V valine              8.9         41           2
 W tryptophan          1.7          8           1
 Y tyrosine            3.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-2C-adrenergic receptor 
ADRA2A                0.463   alpha-2A-adrenergic receptor 
ADRA2B                0.422   alpha-2B-adrenergic receptor 
HTR1A                 0.242   5-hydroxytryptamine (serotonin) receptor 1A 
DRD2                  0.202   dopamine receptor D2 isoform long 
ADRA1D                0.198   alpha-1D-adrenergic receptor 
DRD2                  0.196   dopamine receptor D2 isoform short 
DRD4                  0.193   dopamine receptor D4 
DRD3                  0.184   dopamine receptor D3 isoform a 
DRD3                  0.182   dopamine receptor D3 isoform e 
HRH3                  0.169   histamine receptor H3 
ADRA1B                0.158   alpha-1B-adrenergic receptor 
ADRA1A                0.148   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.148   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.148   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.148   alpha-1A-adrenergic receptor isoform 3 
CHRM1                 0.147   cholinergic receptor, muscarinic 1 
HTR1D                 0.139   5-hydroxytryptamine (serotonin) receptor 1D 
CHRM4                 0.138   cholinergic receptor, muscarinic 4 
HTR1B                 0.131   5-hydroxytryptamine (serotonin) receptor 1B 
HTR1E                 0.128   5-hydroxytryptamine (serotonin) receptor 1E 
ADRB1                 0.126   beta-1-adrenergic receptor 
HTR1F                 0.126   5-hydroxytryptamine (serotonin) receptor 1F 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
CHRM2                 0.124   cholinergic receptor, muscarinic 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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