| Name: EFNB1 | Sequence: fasta or formatted (346aa) | NCBI GI: 4758248 | |
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Description: ephrin-B1 precursor
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.2 25 3 C cysteine 2.0 7 1 D aspartate 3.5 12 1 E glutamate 5.8 20 2 F phenylalanine 2.9 10 2 G glycine 8.7 30 2 H histidine 2.0 7 2 I isoleucine 5.2 18 3 K lysine 6.6 23 2 L leucine 9.0 31 3 M methionine 2.0 7 1 N asparagine 4.0 14 2 P proline 7.2 25 2 Q glutamine 3.5 12 2 R arginine 5.2 18 1 S serine 7.5 26 2 T threonine 6.1 21 2 V valine 6.4 22 2 W tryptophan 1.2 4 1 Y tyrosine 4.0 14 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 ephrin-B1 precursor EFNB2 0.496 ephrin B2 EFNB3 0.312 ephrin-B3 precursor EFNA1 0.067 ephrin A1 isoform b precursor EFNA1 0.066 ephrin A1 isoform a precursor EFNA2 0.056 ephrin-A2 precursor EFNA5 0.050 ephrin-A5 EFNA4 0.043 ephrin A4 isoform b EFNA4 0.041 ephrin A4 isoform a EFNA4 0.040 ephrin A4 isoform c EFNA3 0.040 ephrin A3 CR1 0.015 complement receptor 1 isoform S precursor CR1 0.015 complement receptor 1 isoform F precursor LILRB3 0.015 leukocyte immunoglobulin-like receptor, subfamily B... LILRB3 0.015 leukocyte immunoglobulin-like receptor, subfamily B... SUSD3 0.015 sushi domain containing 3 DPCR1 0.012 diffuse panbronchiolitis critical region 1 protein ... MAP3K12 0.012 mitogen-activated protein kinase kinase kinase 12 [H... GPR64 0.012 G protein-coupled receptor 64 isoform 3 GPR64 0.012 G protein-coupled receptor 64 isoform 2 GPR64 0.012 G protein-coupled receptor 64 isoform 1 GPR64 0.012 G protein-coupled receptor 64 isoform 4 SDC2 0.010 syndecan 2 precursor LOC100286949 0.010 PREDICTED: hypothetical protein XP_002342730 PCDHA9 0.010 protocadherin alpha 9 isoform 1 precursor TCF20 0.009 transcription factor 20 isoform 2 TCF20 0.009 transcription factor 20 isoform 1 TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform d...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
