SDC2 27505

Name: SDC2	Sequence: fasta or formatted (201aa)		NCBI GI: 40548378
Description: syndecan 2 precursor		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 20 2 C cysteine 0.5 1 1 D aspartate 8.0 16 4 E glutamate 9.5 19 2 F phenylalanine 2.5 5 1 G glycine 4.5 9 2 H histidine 1.0 2 1 I isoleucine 5.0 10 1 K lysine 7.5 15 2 L leucine 10.0 20 3 M methionine 2.0 4 1 N asparagine 2.0 4 1 P proline 5.0 10 1 Q glutamine 1.5 3 1 R arginine 4.5 9 2 S serine 10.0 20 2 T threonine 7.0 14 3 V valine 5.5 11 1 W tryptophan 0.5 1 1 Y tyrosine 4.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syndecan 2 precursor SDC4 0.226 syndecan 4 precursor SDC3 0.155 syndecan 3 SDC1 0.120 syndecan 1 precursor SDC1 0.120 syndecan 1 precursor PDPN 0.024 lung type-I cell membrane-associated glycoprotein is... OTUD4 0.024 OTU domain containing 4 protein isoform 3 OTUD4 0.024 OTU domain containing 4 protein isoform 1 NRXN3 0.022 neurexin 3 isoform 3 precursor NRXN3 0.022 neurexin 3 isoform 2 precursor NRXN3 0.022 neurexin 3 isoform 1 precursor C17orf85 0.022 ELG protein isoform b C17orf85 0.022 ELG protein isoform a MUC16 0.019 mucin 16 EFNB1 0.019 ephrin-B1 precursor SMARCC2 0.019 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.019 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.019 SWI/SNF-related matrix-associated actin-dependent r... NRXN1 0.016 neurexin 1 isoform alpha2 precursor NRXN1 0.016 neurexin 1 isoform beta precursor NRXN1 0.016 neurexin 1 isoform alpha1 precursor XRCC4 0.016 X-ray repair cross complementing protein 4 isoform 1... XRCC4 0.016 X-ray repair cross complementing protein 4 isoform 1 ... PRICKLE1 0.014 prickle homolog 1 PRICKLE1 0.014 prickle homolog 1 PRICKLE1 0.014 prickle homolog 1 PRICKLE1 0.014 prickle homolog 1 PDPN 0.014 lung type-I cell membrane-associated glycoprotein is... WDR44 0.014 WD repeat domain 44 protein SPAG17 0.014 sperm associated antigen 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.