Guide to the Human Genome
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Name: CR1 Sequence: fasta or formatted (2039aa) NCBI GI: 86793036
Description:

complement receptor 1 isoform F precursor

Referenced in:

Complement

Other entries for this name:
alt prot [2489aa] complement receptor 1 isoform S precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         76           2
 C cysteine            6.0        122           2
 D aspartate           4.6         93           2
 E glutamate           4.8         98           2
 F phenylalanine       4.5         91           2
 G glycine             8.7        178           2
 H histidine           2.8         57           1
 I isoleucine          5.1        104           2
 K lysine              3.8         77           2
 L leucine             6.5        133           2
 M methionine          1.1         23           1
 N asparagine          5.1        105           2
 P proline             9.8        200           3
 Q glutamine           3.4         70           1
 R arginine            5.0        102           2
 S serine              8.9        181           3
 T threonine           5.2        107           2
 V valine              6.6        135           3
 W tryptophan          1.7         34           1
 Y tyrosine            2.6         53           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement receptor 1 isoform F precursor 
CR1                   0.956   complement receptor 1 isoform S precursor 
CR1L                  0.172   complement component (3b/4b) receptor 1-like 
SVEP1                 0.151   polydom 
CR2                   0.132   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.132   complement component (3d/Epstein Barr virus) recepto...
CSMD3                 0.086   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.086   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.086   CUB and Sushi multiple domains 3 isoform 1 
CSMD1                 0.076   CUB and Sushi multiple domains 1 
CFH                   0.066   complement factor H isoform a precursor 
CSMD2                 0.059   CUB and Sushi multiple domains 2 
C4BPA                 0.045   complement component 4 binding protein, alpha chain p...
SELP                  0.038   selectin P precursor 
CD55                  0.033   decay accelerating factor for complement isoform 2 ...
CD55                  0.033   decay accelerating factor for complement isoform 1 p...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
SELE                  0.030   selectin E precursor 
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.030   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.029   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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