USP48 35616

Name: USP48	Sequence: fasta or formatted (485aa)		NCBI GI: 76257392
Description: ubiquitin specific protease 48 isoform b		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [1035aa] ubiquitin specific protease 48 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 22 2 C cysteine 3.9 19 1 D aspartate 4.5 22 2 E glutamate 9.7 47 2 F phenylalanine 3.7 18 1 G glycine 6.2 30 2 H histidine 2.5 12 1 I isoleucine 4.3 21 1 K lysine 7.4 36 3 L leucine 10.5 51 2 M methionine 1.9 9 1 N asparagine 5.2 25 1 P proline 3.5 17 1 Q glutamine 6.6 32 3 R arginine 5.4 26 2 S serine 5.4 26 1 T threonine 4.1 20 2 V valine 4.9 24 1 W tryptophan 1.4 7 1 Y tyrosine 4.3 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 48 isoform b USP48 0.996 ubiquitin specific protease 48 isoform a USP47 0.130 ubiquitin specific protease 47 USP7 0.126 ubiquitin specific peptidase 7 USP34 0.122 ubiquitin specific protease 34 USP24 0.120 ubiquitin specific protease 24 USP9Y 0.117 ubiquitin specific protease 9, Y-linked USP9X 0.112 ubiquitin specific protease 9, X-linked isoform 4 [... USP9X 0.112 ubiquitin specific protease 9, X-linked isoform 3 [... USP46 0.094 ubiquitin specific peptidase 46 isoform 2 USP46 0.094 ubiquitin specific peptidase 46 isoform 1 LOC100287478 0.094 PREDICTED: hypothetical protein XP_002342479 LOC100287205 0.094 PREDICTED: hypothetical protein XP_002342473 LOC728379 0.092 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC728373 0.092 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC100287513 0.092 PREDICTED: hypothetical protein XP_002342480 LOC100287327 0.092 PREDICTED: hypothetical protein XP_002342475 USP17 0.091 ubiquitin specific peptidase 17 LOC728419 0.091 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728405 0.091 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728400 0.091 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728393 0.091 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728379 0.091 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728373 0.091 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728369 0.091 PREDICTED: similar to deubiquitinating enzyme 3 [Ho... LOC100287441 0.091 PREDICTED: hypothetical protein XP_002342478 LOC100287404 0.091 PREDICTED: hypothetical protein XP_002342477 LOC100287364 0.091 PREDICTED: hypothetical protein XP_002342476 LOC100287238 0.091 PREDICTED: hypothetical protein XP_002342474 LOC100287178 0.091 PREDICTED: hypothetical protein XP_002342472 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.